RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 WDR83OSQ9Y284 106 aa12.65□□□□□ -0.38
CDK5RAP3-228ENST00000583363 LSM4Q9Y4Z0 139 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-228ENST00000583363 IGKV1OR2-108A0A075B7D4 117 aa12.64□□□□□ -0.39
CDK5RAP3-228ENST00000583363 IFNA5P01569 189 aa12.64□□□□□ -0.39
CDK5RAP3-228ENST00000583363 AKR1C1Q04828 323 aa12.64□□□□□ -0.39
CDK5RAP3-228ENST00000583363 Q56UQ5 140 aa12.64□□□□□ -0.39
CDK5RAP3-228ENST00000583363 RPL7L1Q6DKI1 246 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-228ENST00000583363 CLEC19AQ6UXS0 136 aa12.64□□□□□ -0.39
CDK5RAP3-228ENST00000583363 CCDC140Q96MF4 163 aa12.64□□□□□ -0.39
CDK5RAP3-228ENST00000583363 PARD6GQ9BYG4 376 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-228ENST00000583363 WDR61Q9GZS3 305 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-228ENST00000583363 GNB4Q9HAV0 340 aa12.64□□□□□ -0.39
CDK5RAP3-228ENST00000583363 GAR1Q9NY12 217 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-228ENST00000583363 BOLA1Q9Y3E2 137 aa12.64□□□□□ -0.39
CDK5RAP3-228ENST00000583363 TRRAPQ9Y4A5 3859 aa12.63□□□□□ -0.39
CDK5RAP3-228ENST00000583363 IGKV1D-37A0A075B6S9 117 aa12.63□□□□□ -0.39
CDK5RAP3-228ENST00000583363 TRAV30A0A087WSZ9 112 aa12.63□□□□□ -0.39
CDK5RAP3-228ENST00000583363 UBE2L5PA0A1B0GUS4 154 aa12.63□□□□□ -0.39
CDK5RAP3-228ENST00000583363 JTBO76095 146 aa12.63□□□□□ -0.39
CDK5RAP3-228ENST00000583363 CTSGP08311 255 aa12.63□□□□□ -0.39
CDK5RAP3-228ENST00000583363 ZNF266Q14584 549 aa12.63□□□□□ -0.39
CDK5RAP3-228ENST00000583363 TEPPQ6URK8 271 aa12.63□□□□□ -0.39
CDK5RAP3-228ENST00000583363 C11orf44Q8N8P7 122 aa12.63□□□□□ -0.39
CDK5RAP3-228ENST00000583363 UBAC2Q8NBM4 344 aa12.63□□□□□ -0.39
CDK5RAP3-228ENST00000583363 SCGB1C1Q8TD33 95 aa12.63□□□□□ -0.39
CDK5RAP3-228ENST00000583363 BORCS7-ASMTA0A0B4J1R7 106 aa12.62□□□□□ -0.39
CDK5RAP3-228ENST00000583363 OR2T8A6NH00 312 aa12.62□□□□□ -0.39
CDK5RAP3-228ENST00000583363 GNG7O60262 68 aa12.62□□□□□ -0.39
CDK5RAP3-228ENST00000583363 IGLC1P0CG04 106 aa12.62□□□□□ -0.39
CDK5RAP3-228ENST00000583363 C4BPBP20851 252 aa12.62□□□□□ -0.39
CDK5RAP3-228ENST00000583363 FGF7P21781 194 aa12.62□□□□□ -0.39
CDK5RAP3-228ENST00000583363 OR10J1P30954 320 aa12.62□□□□□ -0.39
CDK5RAP3-228ENST00000583363 FAM209BQ5JX69 171 aa12.62□□□□□ -0.39
CDK5RAP3-228ENST00000583363 PRR31Q5SQ13 230 aa12.62□□□□□ -0.39
CDK5RAP3-228ENST00000583363 HIST2H2BDQ6DRA6 164 aa12.62□□□□□ -0.39
CDK5RAP3-228ENST00000583363 BTNL8Q6UX41 500 aa12.62□□□□□ -0.39
CDK5RAP3-228ENST00000583363 OR5B12Q96R08 314 aa12.62□□□□□ -0.39
CDK5RAP3-228ENST00000583363 TRGV9Q99603 122 aa12.62□□□□□ -0.39
CDK5RAP3-228ENST00000583363 CITED2Q99967 270 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-228ENST00000583363 ARV1Q9H2C2 271 aa12.62□□□□□ -0.39
CDK5RAP3-228ENST00000583363 PEF1Q9UBV8 284 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-228ENST00000583363 TSSC4Q9Y5U2 329 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-228ENST00000583363 ANKRD34BA5PLL1 514 aa12.61□□□□□ -0.39
CDK5RAP3-228ENST00000583363 ZFP92A6NM28 416 aa12.61□□□□□ -0.39
CDK5RAP3-228ENST00000583363 I3L521 148 aa12.61□□□□□ -0.39
CDK5RAP3-228ENST00000583363 MPDU1O75352 247 aa12.61□□□□□ -0.39
CDK5RAP3-228ENST00000583363 IGKV1-17P01599 117 aa12.61□□□□□ -0.39
CDK5RAP3-228ENST00000583363 LGALS1P09382 135 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-228ENST00000583363 GPR183P32249 361 aa12.61□□□□□ -0.39
CDK5RAP3-228ENST00000583363 RUNX1Q01196 453 aa12.61□□□□□ -0.39
CDK5RAP3-228ENST00000583363 TIGITQ495A1 244 aa12.61□□□□□ -0.39
CDK5RAP3-228ENST00000583363 C18orf65Q6ZTR6 163 aa12.61□□□□□ -0.39
CDK5RAP3-228ENST00000583363 MGST2Q99735 147 aa12.61□□□□□ -0.39
CDK5RAP3-228ENST00000583363 CHRDL1Q9BU40 450 aa12.61□□□□□ -0.39
CDK5RAP3-228ENST00000583363 ZNF471Q9BX82 626 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-228ENST00000583363 AGPAT2O15120 278 aa12.6□□□□□ -0.39
CDK5RAP3-228ENST00000583363 TGOLN2O43493 480 aa12.6□□□□□ -0.39
CDK5RAP3-228ENST00000583363 TRBV12-3P01733 135 aa12.6□□□□□ -0.39
CDK5RAP3-228ENST00000583363 ADMP35318 185 aa12.6□□□□□ -0.39
CDK5RAP3-228ENST00000583363 RAB31Q13636 194 aa12.6□□□□□ -0.39
CDK5RAP3-228ENST00000583363 SPSB3Q6PJ21 355 aa12.6□□□□□ -0.39
CDK5RAP3-228ENST00000583363 SLC51BQ86UW2 128 aa12.6□□□□□ -0.39
CDK5RAP3-228ENST00000583363 C4orf3Q8WVX3 66 aa12.6□□□□□ -0.39
CDK5RAP3-228ENST00000583363 GINS3Q9BRX5 216 aa12.6□□□□□ -0.39
CDK5RAP3-228ENST00000583363 SLC45A2Q9UMX9 530 aa12.6□□□□□ -0.39
CDK5RAP3-228ENST00000583363 TGP01266 2768 aa12.6□□□□□ -0.39
CDK5RAP3-228ENST00000583363 PPP5D1E7EU14 171 aa12.59□□□□□ -0.39
CDK5RAP3-228ENST00000583363 NUPL2O15504 423 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-228ENST00000583363 HSPB1P04792 205 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-228ENST00000583363 ARL3P36405 182 aa12.59□□□□□ -0.39
CDK5RAP3-228ENST00000583363 CAMLGP49069 296 aa12.59□□□□□ -0.39
CDK5RAP3-228ENST00000583363 YPEL3P61236 119 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-228ENST00000583363 ZNF90Q03938 601 aa12.59□□□□□ -0.39
CDK5RAP3-228ENST00000583363 KHDC1LQ5JSQ8 128 aa12.59□□□□□ -0.39
CDK5RAP3-228ENST00000583363 TMEM182Q6ZP80 229 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-228ENST00000583363 CYP2G1PQ6ZSU1 146 aa12.59□□□□□ -0.39
CDK5RAP3-228ENST00000583363 STOML3Q8TAV4 291 aa12.59□□□□□ -0.39
CDK5RAP3-228ENST00000583363 ZNF747Q9BV97 191 aa12.59□□□□□ -0.39
CDK5RAP3-228ENST00000583363 NPCDR1Q9BY65 106 aa12.59□□□□□ -0.39
CDK5RAP3-228ENST00000583363 ADARB2-AS1A8MUL3 147 aa12.58□□□□□ -0.4
CDK5RAP3-228ENST00000583363 SCGB2A1O75556 95 aa12.58□□□□□ -0.4
CDK5RAP3-228ENST00000583363 ATP6V0CP27449 155 aa12.58□□□□□ -0.4
CDK5RAP3-228ENST00000583363 EIF5AP63241 154 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-228ENST00000583363 BAP18Q8IXM2 172 aa12.58□□□□□ -0.4
CDK5RAP3-228ENST00000583363 HSD17B11Q8NBQ5 300 aa12.58□□□□□ -0.4
CDK5RAP3-228ENST00000583363 KLHL30-AS1Q8NEE0 82 aa12.58□□□□□ -0.4
CDK5RAP3-228ENST00000583363 ZNF414Q96IQ9 312 aa12.58□□□□□ -0.4
CDK5RAP3-228ENST00000583363 GGTLC1Q9BX51 225 aa12.58□□□□□ -0.4
CDK5RAP3-228ENST00000583363 BMPR1BO00238 502 aa12.57□□□□□ -0.4
CDK5RAP3-228ENST00000583363 GGCTO75223 188 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-228ENST00000583363 TOMM40O96008 361 aa12.57□□□□□ -0.4
CDK5RAP3-228ENST00000583363 LINC00869P0C866 280 aa12.57□□□□□ -0.4
CDK5RAP3-228ENST00000583363 RD3LP0DJH9 198 aa12.57□□□□□ -0.4
CDK5RAP3-228ENST00000583363 TPT1P13693 172 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-228ENST00000583363 GATA2P23769 480 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-228ENST00000583363 RPL29P47914 159 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-228ENST00000583363 SELENOTP62341 195 aa12.57□□□□□ -0.4
CDK5RAP3-228ENST00000583363 SHISA2Q6UWI4 295 aa12.57□□□□□ -0.4
CDK5RAP3-228ENST00000583363 NDUFA11Q86Y39 141 aa12.57□□□□□ -0.4
CDK5RAP3-228ENST00000583363 ZNF709Q8N972 641 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms