RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ZNF355PQ9NSJ1 428 aa7.39□□□□□ -1.23
SS18-220ENST00000582092 TRAV30A0A087WSZ9 112 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 TEX22C9J3V5 150 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 J3QLI3 93 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 CLN5O75503 358 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 YIF1AO95070 293 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 FBP1P09467 338 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 LINC00869P0C866 280 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 HIST1H1BP16401 226 aaKnown RBP7.38□□□□□ -1.23
SS18-220ENST00000582092 NPBWR1P48145 328 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 CX3CL1P78423 397 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 GUCA2BQ16661 112 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 FAM74A3Q4VXF1 159 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 C10orf91Q5T1B1 145 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 C10orf113Q5VZT2 155 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 CLRN3Q8NCR9 226 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 OR4X1Q8NH49 305 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 C17orf50Q8WW18 174 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 TMEM158Q8WZ71 300 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 TVP23CQ96ET8 276 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 TMEM68Q96MH6 324 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 RBM14Q96PK6 669 aaKnown RBP7.38□□□□□ -1.23
SS18-220ENST00000582092 UHRF2Q96PU4 802 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 TRGV9Q99603 122 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 TMEM167BQ9NRX6 74 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 FUT9Q9Y231 359 aa7.38□□□□□ -1.23
SS18-220ENST00000582092 ELOA3CA0A087WX78 387 aaPredicted RBP7.37□□□□□ -1.23
SS18-220ENST00000582092 IGHV3-21A0A0B4J1V1 117 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 NPIPB5A8MRT5 1133 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 C9JQL5 133 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 F6UZH7 168 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 TSPAN4O14817 238 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 PDE6DO43924 150 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 OR7C2O60412 319 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 PAGE4O60829 102 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 IGHV3-48P01763 117 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 STAG3L2P0CL84 134 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 STAG3L3P0CL85 134 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 ARL14EPLP0DKL9 152 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 S100A7P31151 101 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 MFAP4P55083 255 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 UBE2G2P60604 165 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 PRR20EP86478 221 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 PRR20CP86479 221 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 PRR20DP86480 221 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 PRR20BP86481 221 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 PRR20AP86496 221 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 MEF2BQ02080 365 aaPredicted RBP7.37□□□□□ -1.23
SS18-220ENST00000582092 MRGPRG-AS1Q2M3A8 158 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 ZNF674Q2M3X9 581 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 GCSAMLQ5JQS6 135 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 C9orf152Q5JTZ5 239 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 RUSC1-AS1Q66K80 236 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 UNQ5815/PRO19632Q6UWF5 114 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 PQLC2Q6ZP29 291 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 SSX7Q7RTT5 188 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 PRIMA1Q86XR5 153 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 Q8N6K4 173 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 CYB561D1Q8N8Q1 229 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 THAP8Q8NA92 274 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 SSX3Q99909 188 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 FAM103A1Q9BTL3 118 aaKnown RBP7.37□□□□□ -1.23
SS18-220ENST00000582092 TMPRSS5Q9H3S3 457 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 SMCO4Q9NRQ5 59 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 PITPNC1Q9UKF7 332 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 TMA7Q9Y2S6 64 aaKnown RBP7.37□□□□□ -1.23
SS18-220ENST00000582092 MOB4Q9Y3A3 225 aa7.37□□□□□ -1.23
SS18-220ENST00000582092 ZNF727A8MUV8 499 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 C11orf94C9JXX5 98 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 TMEM250H0YL14 139 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 H3BQ15 152 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 GNG7O60262 68 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 HYPMO75409 117 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 EIF3GO75821 320 aaKnown RBP eCLIP7.36□□□□□ -1.23
SS18-220ENST00000582092 HLA-DRB1P01911 266 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 C8orf88P0DMB2 117 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 CTRB1P17538 263 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 ADCYAP1P18509 176 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 ORM2P19652 201 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 GATA2P23769 480 aaPredicted RBP7.36□□□□□ -1.23
SS18-220ENST00000582092 GCHFRP30047 84 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 Q56UQ5 140 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 CTRB2Q6GPI1 263 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 BRD3OSQ6XYD6 125 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 PIP4P2Q8N4L2 257 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 TTC9CQ8N5M4 171 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 Q8N9W7 124 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 TMEM116Q8NCL8 245 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 STXBP6Q8NFX7 210 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 OR5T1Q8NG75 326 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 OR1B1Q8NGR6 318 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 MEGF9Q9H1U4 602 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 FNDC4Q9H6D8 234 aaPredicted RBP7.36□□□□□ -1.23
SS18-220ENST00000582092 DOK5Q9P104 306 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 PRELID1Q9Y255 219 aa7.36□□□□□ -1.23
SS18-220ENST00000582092 NF1P21359 2839 aa7.35□□□□□ -1.23
SS18-220ENST00000582092 A0A0U1RQK1 487 aa7.35□□□□□ -1.23
SS18-220ENST00000582092 B4DEV8 164 aa7.35□□□□□ -1.23
SS18-220ENST00000582092 M0QZK8 103 aa7.35□□□□□ -1.23
SS18-220ENST00000582092 NUPL2O15504 423 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms