RNA–Protein interactions for RNA: ENST00000582050.1

EIF4A1-222, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 5

Gene EIF4A1, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-222	ENST00000582050	KRTAP21-3	Q3LHN1	58 aa		13.85	□□□□□ -0.19
EIF4A1-222	ENST00000582050	TEPP	Q6URK8	271 aa		13.85	□□□□□ -0.19
EIF4A1-222	ENST00000582050	SHISA2	Q6UWI4	295 aa		13.85	□□□□□ -0.19
EIF4A1-222	ENST00000582050	TREML4	Q6UXN2	200 aa		13.85	□□□□□ -0.19
EIF4A1-222	ENST00000582050	THAP8	Q8NA92	274 aa		13.85	□□□□□ -0.19
EIF4A1-222	ENST00000582050	FBXL17	Q9UF56	701 aa		13.85	□□□□□ -0.19
EIF4A1-222	ENST00000582050		A0A1W2PRX2	142 aa		13.84	□□□□□ -0.19
EIF4A1-222	ENST00000582050	ANKRD34B	A5PLL1	514 aa		13.84	□□□□□ -0.19
EIF4A1-222	ENST00000582050	ADARB2-AS1	A8MUL3	147 aa		13.84	□□□□□ -0.19
EIF4A1-222	ENST00000582050	GGCT	O75223	188 aa	Known RBP	13.84	□□□□□ -0.19
EIF4A1-222	ENST00000582050	MPDU1	O75352	247 aa		13.84	□□□□□ -0.19
EIF4A1-222	ENST00000582050	FABP1	P07148	127 aa		13.84	□□□□□ -0.19
EIF4A1-222	ENST00000582050	CTSG	P08311	255 aa		13.84	□□□□□ -0.19
EIF4A1-222	ENST00000582050	IGLC1	P0CG04	106 aa		13.84	□□□□□ -0.19
EIF4A1-222	ENST00000582050	OR10J1	P30954	320 aa		13.84	□□□□□ -0.19
EIF4A1-222	ENST00000582050	ARL3	P36405	182 aa		13.84	□□□□□ -0.19
EIF4A1-222	ENST00000582050	ZNF266	Q14584	549 aa		13.84	□□□□□ -0.19
EIF4A1-222	ENST00000582050	C18orf65	Q6ZTR6	163 aa		13.84	□□□□□ -0.19
EIF4A1-222	ENST00000582050	TRGV9	Q99603	122 aa		13.84	□□□□□ -0.19
EIF4A1-222	ENST00000582050	SMIM3	Q9BZL3	60 aa		13.84	□□□□□ -0.19
EIF4A1-222	ENST00000582050	WDR83OS	Q9Y284	106 aa		13.84	□□□□□ -0.19
EIF4A1-222	ENST00000582050	LSM4	Q9Y4Z0	139 aa	Known RBP	13.84	□□□□□ -0.19
EIF4A1-222	ENST00000582050	ZFP92	A6NM28	416 aa		13.83	□□□□□ -0.2
EIF4A1-222	ENST00000582050	IFNA5	P01569	189 aa		13.83	□□□□□ -0.2
EIF4A1-222	ENST00000582050	TRBV12-3	P01733	135 aa		13.83	□□□□□ -0.2
EIF4A1-222	ENST00000582050	CXCL2	P19875	107 aa		13.83	□□□□□ -0.2
EIF4A1-222	ENST00000582050	ZP3	P21754	424 aa		13.83	□□□□□ -0.2
EIF4A1-222	ENST00000582050	EIF2B2	P49770	351 aa	Known RBP	13.83	□□□□□ -0.2
EIF4A1-222	ENST00000582050	YPEL3	P61236	119 aa	Predicted RBP	13.83	□□□□□ -0.2
EIF4A1-222	ENST00000582050	REL	Q04864	619 aa	Predicted RBP	13.83	□□□□□ -0.2
EIF4A1-222	ENST00000582050	RAB31	Q13636	194 aa		13.83	□□□□□ -0.2
EIF4A1-222	ENST00000582050	NSUN5P1	Q3KNT7	163 aa		13.83	□□□□□ -0.2
EIF4A1-222	ENST00000582050	C8orf86	Q6ZUL3	223 aa		13.83	□□□□□ -0.2
EIF4A1-222	ENST00000582050	OR11H1	Q8NG94	326 aa		13.83	□□□□□ -0.2
EIF4A1-222	ENST00000582050	OR1N2	Q8NGR9	330 aa		13.83	□□□□□ -0.2
EIF4A1-222	ENST00000582050	DPF1	Q92782	380 aa		13.83	□□□□□ -0.2
EIF4A1-222	ENST00000582050	IGKV1OR2-108	A0A075B7D4	117 aa		13.82	□□□□□ -0.2
EIF4A1-222	ENST00000582050	UBE2L5P	A0A1B0GUS4	154 aa		13.82	□□□□□ -0.2
EIF4A1-222	ENST00000582050	PPP5D1	E7EU14	171 aa		13.82	□□□□□ -0.2
EIF4A1-222	ENST00000582050	LINC01619	G3V211	115 aa		13.82	□□□□□ -0.2
EIF4A1-222	ENST00000582050	BMPR1B	O00238	502 aa		13.82	□□□□□ -0.2
EIF4A1-222	ENST00000582050	IGKV1-17	P01599	117 aa		13.82	□□□□□ -0.2
EIF4A1-222	ENST00000582050	ADM	P35318	185 aa		13.82	□□□□□ -0.2
EIF4A1-222	ENST00000582050	ZNF616	Q08AN1	781 aa		13.82	□□□□□ -0.2
EIF4A1-222	ENST00000582050	LGALSL	Q3ZCW2	172 aa	Predicted RBP	13.82	□□□□□ -0.2
EIF4A1-222	ENST00000582050	HIST2H2BD	Q6DRA6	164 aa		13.82	□□□□□ -0.2
EIF4A1-222	ENST00000582050	PPP1R14B	Q96C90	147 aa		13.82	□□□□□ -0.2
EIF4A1-222	ENST00000582050	MDFI	Q99750	246 aa		13.82	□□□□□ -0.2
EIF4A1-222	ENST00000582050	ARPC5L	Q9BPX5	153 aa		13.82	□□□□□ -0.2
EIF4A1-222	ENST00000582050	CHRDL1	Q9BU40	450 aa		13.82	□□□□□ -0.2
EIF4A1-222	ENST00000582050	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.82	□□□□□ -0.2
EIF4A1-222	ENST00000582050	IGKV1D-37	A0A075B6S9	117 aa		13.81	□□□□□ -0.2
EIF4A1-222	ENST00000582050	IGHV4OR15-8	A0A075B7B6	117 aa		13.81	□□□□□ -0.2
EIF4A1-222	ENST00000582050		A0A087WW49	117 aa		13.81	□□□□□ -0.2
EIF4A1-222	ENST00000582050	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.81	□□□□□ -0.2
EIF4A1-222	ENST00000582050	KANTR	A0A1W2PQU2	76 aa		13.81	□□□□□ -0.2
EIF4A1-222	ENST00000582050	CCL24	O00175	119 aa		13.81	□□□□□ -0.2
EIF4A1-222	ENST00000582050	JTB	O76095	146 aa		13.81	□□□□□ -0.2
EIF4A1-222	ENST00000582050	BTNL8	Q6UX41	500 aa		13.81	□□□□□ -0.2
EIF4A1-222	ENST00000582050	TMUB2	Q71RG4	321 aa		13.81	□□□□□ -0.2
EIF4A1-222	ENST00000582050	OR4F17	Q8NGA8	305 aa		13.81	□□□□□ -0.2
EIF4A1-222	ENST00000582050	SCGB1C1	Q8TD33	95 aa		13.81	□□□□□ -0.2
EIF4A1-222	ENST00000582050	OR4F4	Q96R69	305 aa		13.81	□□□□□ -0.2
EIF4A1-222	ENST00000582050	WDR61	Q9GZS3	305 aa	Known RBP	13.81	□□□□□ -0.2
EIF4A1-222	ENST00000582050	ARL6	Q9H0F7	186 aa		13.81	□□□□□ -0.2
EIF4A1-222	ENST00000582050	WFDC1	Q9HC57	220 aa		13.81	□□□□□ -0.2
EIF4A1-222	ENST00000582050	CFD	P00746	253 aa	Predicted RBP	13.8	□□□□□ -0.2
EIF4A1-222	ENST00000582050	C4BPB	P20851	252 aa		13.8	□□□□□ -0.2
EIF4A1-222	ENST00000582050	FGF7	P21781	194 aa		13.8	□□□□□ -0.2
EIF4A1-222	ENST00000582050	MYCNOS	P40205	109 aa		13.8	□□□□□ -0.2
EIF4A1-222	ENST00000582050	SELENOT	P62341	195 aa		13.8	□□□□□ -0.2
EIF4A1-222	ENST00000582050	FHL3	Q13643	280 aa		13.8	□□□□□ -0.2
EIF4A1-222	ENST00000582050	RPEL1	Q2QD12	228 aa		13.8	□□□□□ -0.2
EIF4A1-222	ENST00000582050	DEFB136	Q30KP8	78 aa		13.8	□□□□□ -0.2
EIF4A1-222	ENST00000582050	TIGIT	Q495A1	244 aa		13.8	□□□□□ -0.2
EIF4A1-222	ENST00000582050	ZNF600	Q6ZNG1	722 aa		13.8	□□□□□ -0.2
EIF4A1-222	ENST00000582050	GPHB5	Q86YW7	130 aa		13.8	□□□□□ -0.2
EIF4A1-222	ENST00000582050	RAX2	Q96IS3	184 aa		13.8	□□□□□ -0.2
EIF4A1-222	ENST00000582050	AGPAT2	O15120	278 aa		13.79	□□□□□ -0.2
EIF4A1-222	ENST00000582050	BCL2L11	O43521	198 aa		13.79	□□□□□ -0.2
EIF4A1-222	ENST00000582050	TOMM40	O96008	361 aa		13.79	□□□□□ -0.2
EIF4A1-222	ENST00000582050	RD3L	P0DJH9	198 aa		13.79	□□□□□ -0.2
EIF4A1-222	ENST00000582050	CAMLG	P49069	296 aa		13.79	□□□□□ -0.2
EIF4A1-222	ENST00000582050	FAM106A	Q4KMX7	169 aa		13.79	□□□□□ -0.2
EIF4A1-222	ENST00000582050	C9orf62	Q8N4C0	152 aa		13.79	□□□□□ -0.2
EIF4A1-222	ENST00000582050		Q8WTZ3	238 aa		13.79	□□□□□ -0.2
EIF4A1-222	ENST00000582050	MGST2	Q99735	147 aa		13.79	□□□□□ -0.2
EIF4A1-222	ENST00000582050	NDUFA4	O00483	81 aa		13.78	□□□□□ -0.2
EIF4A1-222	ENST00000582050	OR2C1	O95371	312 aa		13.78	□□□□□ -0.2
EIF4A1-222	ENST00000582050	HOXD3	P31249	432 aa	Predicted RBP	13.78	□□□□□ -0.2
EIF4A1-222	ENST00000582050	ZNF90	Q03938	601 aa		13.78	□□□□□ -0.2
EIF4A1-222	ENST00000582050	CYP2G1P	Q6ZSU1	146 aa		13.78	□□□□□ -0.2
EIF4A1-222	ENST00000582050	ZNF709	Q8N972	641 aa		13.78	□□□□□ -0.2
EIF4A1-222	ENST00000582050	NPCDR1	Q9BY65	106 aa		13.78	□□□□□ -0.2
EIF4A1-222	ENST00000582050	KCNIP2	Q9NS61	270 aa		13.78	□□□□□ -0.2
EIF4A1-222	ENST00000582050	C17orf112	F2Z3M2	114 aa		13.77	□□□□□ -0.21
EIF4A1-222	ENST00000582050	HNRNPC	P07910	306 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
EIF4A1-222	ENST00000582050	PSG1	P11464	419 aa		13.77	□□□□□ -0.21
EIF4A1-222	ENST00000582050	EIF5A	P63241	154 aa	Known RBP	13.77	□□□□□ -0.21
EIF4A1-222	ENST00000582050	KLF5	Q13887	457 aa	Predicted RBP	13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms