RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 A0A1W2PS18 150 aa15.64■□□□□ 0.09
CSNK1D-215ENST00000580784 SCGB2A1O75556 95 aa15.64■□□□□ 0.09
CSNK1D-215ENST00000580784 SULT1A3P0DMM9 295 aa15.64■□□□□ 0.09
CSNK1D-215ENST00000580784 SULT1A4P0DMN0 295 aa15.64■□□□□ 0.09
CSNK1D-215ENST00000580784 RND2P52198 227 aa15.64■□□□□ 0.09
CSNK1D-215ENST00000580784 DEFB131AP59861 70 aa15.64■□□□□ 0.09
CSNK1D-215ENST00000580784 LEMD1Q68G75 181 aa15.64■□□□□ 0.09
CSNK1D-215ENST00000580784 RNASEH2CQ8TDP1 164 aaKnown RBP15.64■□□□□ 0.09
CSNK1D-215ENST00000580784 RABAC1Q9UI14 185 aa15.64■□□□□ 0.09
CSNK1D-215ENST00000580784 TRAV2A0A0B4J234 112 aa15.63■□□□□ 0.09
CSNK1D-215ENST00000580784 IGLC1P0CG04 106 aa15.63■□□□□ 0.09
CSNK1D-215ENST00000580784 SUPT4H1P63272 117 aaKnown RBP15.63■□□□□ 0.09
CSNK1D-215ENST00000580784 RBMS2Q15434 407 aaKnown RBP15.63■□□□□ 0.09
CSNK1D-215ENST00000580784 NMSQ5H8A3 153 aa15.63■□□□□ 0.09
CSNK1D-215ENST00000580784 LYZL2Q7Z4W2 148 aa15.63■□□□□ 0.09
CSNK1D-215ENST00000580784 SLC25A4P12235 298 aa15.62■□□□□ 0.09
CSNK1D-215ENST00000580784 P2RY1P47900 373 aa15.62■□□□□ 0.09
CSNK1D-215ENST00000580784 STXBP6Q8NFX7 210 aa15.62■□□□□ 0.09
CSNK1D-215ENST00000580784 A0A0B4J2A0 478 aa15.61■□□□□ 0.09
CSNK1D-215ENST00000580784 NPY1RP25929 384 aa15.61■□□□□ 0.09
CSNK1D-215ENST00000580784 OR10J1P30954 320 aa15.61■□□□□ 0.09
CSNK1D-215ENST00000580784 OR1S2Q8NGQ3 325 aa15.61■□□□□ 0.09
CSNK1D-215ENST00000580784 Q8WTZ3 238 aa15.61■□□□□ 0.09
CSNK1D-215ENST00000580784 RARRES2Q99969 163 aa15.61■□□□□ 0.09
CSNK1D-215ENST00000580784 CACFD1Q9UGQ2 172 aa15.61■□□□□ 0.09
CSNK1D-215ENST00000580784 SHPKQ9UHJ6 478 aa15.61■□□□□ 0.09
CSNK1D-215ENST00000580784 K7EQG2 157 aa15.6■□□□□ 0.09
CSNK1D-215ENST00000580784 ATF4P18848 351 aaPredicted RBP15.6■□□□□ 0.09
CSNK1D-215ENST00000580784 CCR6P51684 374 aa15.6■□□□□ 0.09
CSNK1D-215ENST00000580784 YPEL3P61236 119 aaPredicted RBP15.6■□□□□ 0.09
CSNK1D-215ENST00000580784 KLF9Q13886 244 aaPredicted RBP15.6■□□□□ 0.09
CSNK1D-215ENST00000580784 SMCO1Q147U7 214 aa15.6■□□□□ 0.09
CSNK1D-215ENST00000580784 CEMP1Q6PRD7 247 aaPredicted RBP15.6■□□□□ 0.09
CSNK1D-215ENST00000580784 GATAD1Q8WUU5 269 aa15.6■□□□□ 0.09
CSNK1D-215ENST00000580784 NPIPB3Q92617 1050 aa15.6■□□□□ 0.09
CSNK1D-215ENST00000580784 NARS2Q96I59 477 aaKnown RBP15.6■□□□□ 0.09
CSNK1D-215ENST00000580784 HSPB7Q9UBY9 170 aa15.6■□□□□ 0.09
CSNK1D-215ENST00000580784 U3KQE9 123 aa15.6■□□□□ 0.09
CSNK1D-215ENST00000580784 NUPR2A6NF83 97 aa15.59■□□□□ 0.09
CSNK1D-215ENST00000580784 CA1P00915 261 aaPredicted RBP15.59■□□□□ 0.09
CSNK1D-215ENST00000580784 IFNA10P01566 189 aa15.59■□□□□ 0.09
CSNK1D-215ENST00000580784 PYDC2Q56P42 97 aa15.59■□□□□ 0.09
CSNK1D-215ENST00000580784 ETFRF1Q6IPR1 90 aa15.59■□□□□ 0.09
CSNK1D-215ENST00000580784 LGI3Q8N145 548 aa15.59■□□□□ 0.09
CSNK1D-215ENST00000580784 TMEM217Q8N7C4 229 aa15.59■□□□□ 0.09
CSNK1D-215ENST00000580784 OR11H2Q8NH07 326 aa15.59■□□□□ 0.09
CSNK1D-215ENST00000580784 ACY3Q96HD9 319 aa15.59■□□□□ 0.09
CSNK1D-215ENST00000580784 GRAMD2BQ96HH9 432 aa15.59■□□□□ 0.09
CSNK1D-215ENST00000580784 RBKSQ9H477 322 aa15.59■□□□□ 0.09
CSNK1D-215ENST00000580784 ANXA3P12429 323 aa15.58■□□□□ 0.08
CSNK1D-215ENST00000580784 NOXA1Q86UR1 476 aa15.58■□□□□ 0.08
CSNK1D-215ENST00000580784 DTD1Q8TEA8 209 aa15.58■□□□□ 0.08
CSNK1D-215ENST00000580784 TRIM63Q969Q1 353 aa15.58■□□□□ 0.08
CSNK1D-215ENST00000580784 U3KQ87 197 aa15.58■□□□□ 0.08
CSNK1D-215ENST00000580784 V9GYH0 126 aa15.58■□□□□ 0.08
CSNK1D-215ENST00000580784 HNRNPCP07910 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
CSNK1D-215ENST00000580784 ZNF688P0C7X2 276 aa15.57■□□□□ 0.08
CSNK1D-215ENST00000580784 FAUP35544 74 aaKnown RBP15.57■□□□□ 0.08
CSNK1D-215ENST00000580784 USF2Q15853 346 aaPredicted RBP15.57■□□□□ 0.08
CSNK1D-215ENST00000580784 TMED4Q7Z7H5 227 aa15.57■□□□□ 0.08
CSNK1D-215ENST00000580784 STHQ8IWL8 128 aa15.57■□□□□ 0.08
CSNK1D-215ENST00000580784 TOMM5Q8N4H5 51 aa15.57■□□□□ 0.08
CSNK1D-215ENST00000580784 DCANP1Q8TF63 244 aa15.57■□□□□ 0.08
CSNK1D-215ENST00000580784 LINC00476Q8WZB0 136 aa15.57■□□□□ 0.08
CSNK1D-215ENST00000580784 CCDC160A6NGH7 325 aa15.56■□□□□ 0.08
CSNK1D-215ENST00000580784 IL4P05112 153 aa15.56■□□□□ 0.08
CSNK1D-215ENST00000580784 SRPXP78539 464 aa15.56■□□□□ 0.08
CSNK1D-215ENST00000580784 C16orf54Q6UWD8 224 aa15.56■□□□□ 0.08
CSNK1D-215ENST00000580784 OR1S1Q8NH92 325 aa15.56■□□□□ 0.08
CSNK1D-215ENST00000580784 RD3LP0DJH9 198 aa15.55■□□□□ 0.08
CSNK1D-215ENST00000580784 AP3S2P59780 193 aa15.55■□□□□ 0.08
CSNK1D-215ENST00000580784 DHRS2Q13268 280 aa15.55■□□□□ 0.08
CSNK1D-215ENST00000580784 ZNF79Q15937 498 aa15.55■□□□□ 0.08
CSNK1D-215ENST00000580784 GLMPQ8WWB7 406 aa15.55■□□□□ 0.08
CSNK1D-215ENST00000580784 HELTA6NFD8 242 aa15.54■□□□□ 0.08
CSNK1D-215ENST00000580784 KNCNA6PVL3 124 aa15.54■□□□□ 0.08
CSNK1D-215ENST00000580784 LY6G6CO95867 125 aa15.54■□□□□ 0.08
CSNK1D-215ENST00000580784 TOMM40O96008 361 aa15.54■□□□□ 0.08
CSNK1D-215ENST00000580784 IFNA4P05014 189 aa15.54■□□□□ 0.08
CSNK1D-215ENST00000580784 PSG1P11464 419 aa15.54■□□□□ 0.08
CSNK1D-215ENST00000580784 EIF2B2P49770 351 aaKnown RBP15.54■□□□□ 0.08
CSNK1D-215ENST00000580784 TMEM128Q5BJH2 165 aa15.54■□□□□ 0.08
CSNK1D-215ENST00000580784 TRPT1Q86TN4 253 aaKnown RBP15.54■□□□□ 0.08
CSNK1D-215ENST00000580784 PHLDA1Q8WV24 401 aaPredicted RBP15.54■□□□□ 0.08
CSNK1D-215ENST00000580784 KLK5Q9Y337 293 aaPredicted RBP15.54■□□□□ 0.08
CSNK1D-215ENST00000580784 DEFB4AO15263 64 aa15.53■□□□□ 0.08
CSNK1D-215ENST00000580784 GIG44P09565 113 aaPredicted RBP15.53■□□□□ 0.08
CSNK1D-215ENST00000580784 S100A5P33763 92 aa15.53■□□□□ 0.08
CSNK1D-215ENST00000580784 AP2S1P53680 142 aaPredicted RBP15.53■□□□□ 0.08
CSNK1D-215ENST00000580784 BUB3O43684 328 aa15.52■□□□□ 0.08
CSNK1D-215ENST00000580784 PITX3O75364 302 aa15.52■□□□□ 0.08
CSNK1D-215ENST00000580784 VAMP1P23763 118 aa15.52■□□□□ 0.08
CSNK1D-215ENST00000580784 NANOS2P60321 138 aaKnown RBP15.52■□□□□ 0.08
CSNK1D-215ENST00000580784 GAMTQ14353 236 aa15.52■□□□□ 0.08
CSNK1D-215ENST00000580784 ACTL10Q5JWF8 245 aa15.52■□□□□ 0.08
CSNK1D-215ENST00000580784 CCDC190Q86UF4 302 aa15.52■□□□□ 0.08
CSNK1D-215ENST00000580784 OR51G1Q8NGK1 321 aa15.52■□□□□ 0.08
CSNK1D-215ENST00000580784 C11orf45Q8TAV5 145 aa15.52■□□□□ 0.08
CSNK1D-215ENST00000580784 C11orf68Q9H3H3 251 aaKnown RBP15.52■□□□□ 0.08
CSNK1D-215ENST00000580784 DUXBA0A1W2PPF3 345 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms