RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 A0A1W2PS18 150 aa12.35□□□□□ -0.43
IFT20-210ENST00000580357 CHEK1O14757 476 aa12.35□□□□□ -0.43
IFT20-210ENST00000580357 IAPPP10997 89 aa12.35□□□□□ -0.43
IFT20-210ENST00000580357 OR10J1P30954 320 aa12.35□□□□□ -0.43
IFT20-210ENST00000580357 CMC4P56277 68 aaPredicted RBP12.35□□□□□ -0.43
IFT20-210ENST00000580357 DEFA1P59665 94 aa12.35□□□□□ -0.43
IFT20-210ENST00000580357 DEFA3P59666 94 aa12.35□□□□□ -0.43
IFT20-210ENST00000580357 CD81P60033 236 aa12.35□□□□□ -0.43
IFT20-210ENST00000580357 IAH1Q2TAA2 248 aaPredicted RBP12.35□□□□□ -0.43
IFT20-210ENST00000580357 OR4D5Q8NGN0 318 aa12.35□□□□□ -0.43
IFT20-210ENST00000580357 ENKURQ8TC29 256 aa12.35□□□□□ -0.43
IFT20-210ENST00000580357 NARS2Q96I59 477 aaKnown RBP12.35□□□□□ -0.43
IFT20-210ENST00000580357 RHPN1-AS1Q9BWJ2 59 aa12.35□□□□□ -0.43
IFT20-210ENST00000580357 TMEM231Q9H6L2 316 aa12.35□□□□□ -0.43
IFT20-210ENST00000580357 MRPL36Q9P0J6 103 aaKnown RBP12.35□□□□□ -0.43
IFT20-210ENST00000580357 ZNF207O43670 478 aaKnown RBP12.34□□□□□ -0.43
IFT20-210ENST00000580357 SCAF4O95104 1147 aaKnown RBP12.34□□□□□ -0.43
IFT20-210ENST00000580357 IGKV1-17P01599 117 aa12.34□□□□□ -0.43
IFT20-210ENST00000580357 IL5P05113 134 aa12.34□□□□□ -0.43
IFT20-210ENST00000580357 FABP1P07148 127 aa12.34□□□□□ -0.43
IFT20-210ENST00000580357 FRMD6-AS1P0C7T7 363 aa12.34□□□□□ -0.43
IFT20-210ENST00000580357 IGLC1P0CG04 106 aa12.34□□□□□ -0.43
IFT20-210ENST00000580357 C12orf45Q8N5I9 185 aaPredicted RBP12.34□□□□□ -0.43
IFT20-210ENST00000580357 OR52B4Q8NGK2 314 aa12.34□□□□□ -0.43
IFT20-210ENST00000580357 SLC35E1Q96K37 410 aa12.34□□□□□ -0.43
IFT20-210ENST00000580357 MAGT1Q9H0U3 335 aa12.34□□□□□ -0.43
IFT20-210ENST00000580357 STRAPQ9Y3F4 350 aaKnown RBP12.34□□□□□ -0.43
IFT20-210ENST00000580357 IGHV3OR16-8A0A075B7F1 116 aa12.33□□□□□ -0.44
IFT20-210ENST00000580357 TAS2R30P59541 319 aa12.33□□□□□ -0.44
IFT20-210ENST00000580357 PAFAH1B2P68402 229 aa12.33□□□□□ -0.44
IFT20-210ENST00000580357 TIGITQ495A1 244 aa12.33□□□□□ -0.44
IFT20-210ENST00000580357 ZBTB8BQ8NAP8 495 aaPredicted RBP12.33□□□□□ -0.44
IFT20-210ENST00000580357 ACY3Q96HD9 319 aa12.33□□□□□ -0.44
IFT20-210ENST00000580357 ZNF414Q96IQ9 312 aa12.33□□□□□ -0.44
IFT20-210ENST00000580357 SMIM8Q96KF7 97 aa12.33□□□□□ -0.44
IFT20-210ENST00000580357 METTL26Q96S19 204 aa12.33□□□□□ -0.44
IFT20-210ENST00000580357 RAB40CQ96S21 281 aa12.33□□□□□ -0.44
IFT20-210ENST00000580357 ZFAND3Q9H8U3 227 aa12.33□□□□□ -0.44
IFT20-210ENST00000580357 GPN1Q9HCN4 374 aaPredicted RBP12.33□□□□□ -0.44
IFT20-210ENST00000580357 GSKIPQ9P0R6 139 aa12.33□□□□□ -0.44
IFT20-210ENST00000580357 PAIP2BQ9ULR5 123 aaKnown RBP12.33□□□□□ -0.44
IFT20-210ENST00000580357 OR4C46A6NHA9 309 aa12.32□□□□□ -0.44
IFT20-210ENST00000580357 MPTX1A8MV57 137 aa12.32□□□□□ -0.44
IFT20-210ENST00000580357 OR11H12B2RN74 326 aa12.32□□□□□ -0.44
IFT20-210ENST00000580357 CD7P09564 240 aa12.32□□□□□ -0.44
IFT20-210ENST00000580357 RD3LP0DJH9 198 aa12.32□□□□□ -0.44
IFT20-210ENST00000580357 GAMTQ14353 236 aa12.32□□□□□ -0.44
IFT20-210ENST00000580357 SPANXN5Q5MJ07 72 aa12.32□□□□□ -0.44
IFT20-210ENST00000580357 FAM110AQ9BQ89 295 aa12.32□□□□□ -0.44
IFT20-210ENST00000580357 VSIRQ9H7M9 311 aa12.32□□□□□ -0.44
IFT20-210ENST00000580357 ZMAT4Q9H898 229 aa12.32□□□□□ -0.44
IFT20-210ENST00000580357 PSENENQ9NZ42 101 aa12.32□□□□□ -0.44
IFT20-210ENST00000580357 PFDN2Q9UHV9 154 aa12.32□□□□□ -0.44
IFT20-210ENST00000580357 PRAF2O60831 178 aa12.31□□□□□ -0.44
IFT20-210ENST00000580357 TOMM40O96008 361 aa12.31□□□□□ -0.44
IFT20-210ENST00000580357 CRYBB3P26998 211 aa12.31□□□□□ -0.44
IFT20-210ENST00000580357 POLR2GP62487 172 aaKnown RBP eCLIP12.31□□□□□ -0.44
IFT20-210ENST00000580357 IFITM3Q01628 133 aa12.31□□□□□ -0.44
IFT20-210ENST00000580357 C11orf87Q6NUJ2 197 aa12.31□□□□□ -0.44
IFT20-210ENST00000580357 SBSPONQ8IVN8 264 aa12.31□□□□□ -0.44
IFT20-210ENST00000580357 GRAMD2BQ96HH9 432 aa12.31□□□□□ -0.44
IFT20-210ENST00000580357 RNF2Q99496 336 aa12.31□□□□□ -0.44
IFT20-210ENST00000580357 ASCL2Q99929 193 aa12.31□□□□□ -0.44
IFT20-210ENST00000580357 SEC22CQ9BRL7 303 aa12.31□□□□□ -0.44
IFT20-210ENST00000580357 C5orf51A6NDU8 294 aa12.3□□□□□ -0.44
IFT20-210ENST00000580357 ZFP92A6NM28 416 aa12.3□□□□□ -0.44
IFT20-210ENST00000580357 CFDP00746 253 aaPredicted RBP12.3□□□□□ -0.44
IFT20-210ENST00000580357 EIF2B2P49770 351 aaKnown RBP12.3□□□□□ -0.44
IFT20-210ENST00000580357 FAM90A2PQ658T7 463 aa12.3□□□□□ -0.44
IFT20-210ENST00000580357 C2orf50Q96LR7 162 aa12.3□□□□□ -0.44
IFT20-210ENST00000580357 SNRPGP15A8MWD9 76 aa12.29□□□□□ -0.44
IFT20-210ENST00000580357 FAM25EA8MYX2 175 aa12.29□□□□□ -0.44
IFT20-210ENST00000580357 SCGB1D2O95969 90 aa12.29□□□□□ -0.44
IFT20-210ENST00000580357 HNRNPCP07910 306 aaKnown RBP eCLIP12.29□□□□□ -0.44
IFT20-210ENST00000580357 GSG1LQ6UXU4 331 aa12.29□□□□□ -0.44
IFT20-210ENST00000580357 DEFB125Q8N687 156 aa12.29□□□□□ -0.44
IFT20-210ENST00000580357 OR51G1Q8NGK1 321 aa12.29□□□□□ -0.44
IFT20-210ENST00000580357 TRGV9Q99603 122 aa12.29□□□□□ -0.44
IFT20-210ENST00000580357 SELENOKQ9Y6D0 94 aa12.29□□□□□ -0.44
IFT20-210ENST00000580357 U3KQK5 164 aa12.29□□□□□ -0.44
IFT20-210ENST00000580357 IGHV3-49A0A0A0MS15 119 aa12.28□□□□□ -0.44
IFT20-210ENST00000580357 TRAV2A0A0B4J234 112 aa12.28□□□□□ -0.44
IFT20-210ENST00000580357 SSSCA1O60232 199 aa12.28□□□□□ -0.44
IFT20-210ENST00000580357 TSC22D2O75157 780 aa12.28□□□□□ -0.44
IFT20-210ENST00000580357 IL4P05112 153 aa12.28□□□□□ -0.44
IFT20-210ENST00000580357 NUP62P37198 522 aaPredicted RBP12.28□□□□□ -0.44
IFT20-210ENST00000580357 AP2S1P53680 142 aaPredicted RBP12.28□□□□□ -0.44
IFT20-210ENST00000580357 LINC00322Q6ZN03 302 aaPredicted RBP12.28□□□□□ -0.44
IFT20-210ENST00000580357 TCF24Q7RTU0 167 aa12.28□□□□□ -0.44
IFT20-210ENST00000580357 NRARPQ7Z6K4 114 aa12.28□□□□□ -0.44
IFT20-210ENST00000580357 ST8SIA2Q92186 375 aa12.28□□□□□ -0.44
IFT20-210ENST00000580357 MARVELD1Q9BSK0 173 aa12.28□□□□□ -0.44
IFT20-210ENST00000580357 SRD5A3Q9H8P0 318 aa12.28□□□□□ -0.44
IFT20-210ENST00000580357 PRSS46E5RG02 174 aa12.27□□□□□ -0.45
IFT20-210ENST00000580357 INMT-MINDY4F8WBC2 141 aa12.27□□□□□ -0.45
IFT20-210ENST00000580357 L7N2F9 121 aa12.27□□□□□ -0.45
IFT20-210ENST00000580357 DNASE2O00115 360 aaPredicted RBP12.27□□□□□ -0.45
IFT20-210ENST00000580357 MBPP02686 304 aaPredicted RBP12.27□□□□□ -0.45
IFT20-210ENST00000580357 PSG1P11464 419 aa12.27□□□□□ -0.45
IFT20-210ENST00000580357 S100A7P31151 101 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms