RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 CHEK1O14757 476 aa17.94■□□□□ 0.46
LIMD2-207ENST00000579329 SYNGR2O43760 224 aa17.94■□□□□ 0.46
LIMD2-207ENST00000579329 IGKV1-17P01599 117 aa17.94■□□□□ 0.46
LIMD2-207ENST00000579329 TIGITQ495A1 244 aa17.94■□□□□ 0.46
LIMD2-207ENST00000579329 MZT2BQ6NZ67 158 aa17.94■□□□□ 0.46
LIMD2-207ENST00000579329 IGHV3-49A0A0A0MS15 119 aa17.93■□□□□ 0.46
LIMD2-207ENST00000579329 OR11H12B2RN74 326 aa17.93■□□□□ 0.46
LIMD2-207ENST00000579329 IGLC1P0CG04 106 aa17.93■□□□□ 0.46
LIMD2-207ENST00000579329 OR10J1P30954 320 aa17.93■□□□□ 0.46
LIMD2-207ENST00000579329 RAB11AP62491 216 aa17.93■□□□□ 0.46
LIMD2-207ENST00000579329 MITD1Q8WV92 249 aa17.93■□□□□ 0.46
LIMD2-207ENST00000579329 ACY3Q96HD9 319 aa17.93■□□□□ 0.46
LIMD2-207ENST00000579329 MAGT1Q9H0U3 335 aa17.93■□□□□ 0.46
LIMD2-207ENST00000579329 NUDT15Q9NV35 164 aa17.93■□□□□ 0.46
LIMD2-207ENST00000579329 TBC1D24Q9ULP9 559 aa17.93■□□□□ 0.46
LIMD2-207ENST00000579329 TRAV6A0A075B6T7 132 aa17.92■□□□□ 0.46
LIMD2-207ENST00000579329 FAM240BA0A1B0GVZ2 78 aa17.92■□□□□ 0.46
LIMD2-207ENST00000579329 RPP30P78346 268 aaKnown RBP17.92■□□□□ 0.46
LIMD2-207ENST00000579329 ASAH1Q13510 395 aa17.92■□□□□ 0.46
LIMD2-207ENST00000579329 DEFB125Q8N687 156 aa17.92■□□□□ 0.46
LIMD2-207ENST00000579329 NPIPB3Q92617 1050 aa17.92■□□□□ 0.46
LIMD2-207ENST00000579329 RNF2Q99496 336 aa17.92■□□□□ 0.46
LIMD2-207ENST00000579329 WFDC10AQ9H1F0 79 aa17.92■□□□□ 0.46
LIMD2-207ENST00000579329 MPTX1A8MV57 137 aa17.91■□□□□ 0.46
LIMD2-207ENST00000579329 WRBO00258 174 aa17.91■□□□□ 0.46
LIMD2-207ENST00000579329 UPK1BO75841 260 aa17.91■□□□□ 0.46
LIMD2-207ENST00000579329 GPX4P36969 197 aaPredicted RBP17.91■□□□□ 0.46
LIMD2-207ENST00000579329 SRD5A3Q9H8P0 318 aa17.91■□□□□ 0.46
LIMD2-207ENST00000579329 PAIP2BQ9ULR5 123 aaKnown RBP17.91■□□□□ 0.46
LIMD2-207ENST00000579329 IGHV3OR16-13A0A075B7E8 117 aa17.9■□□□□ 0.46
LIMD2-207ENST00000579329 IGHV3-74A0A0B4J1X5 117 aa17.9■□□□□ 0.46
LIMD2-207ENST00000579329 OR4C46A6NHA9 309 aa17.9■□□□□ 0.46
LIMD2-207ENST00000579329 H2AFB2P0C5Z0 115 aa17.9■□□□□ 0.46
LIMD2-207ENST00000579329 YPEL3P61236 119 aaPredicted RBP17.9■□□□□ 0.46
LIMD2-207ENST00000579329 ID3Q02535 119 aa17.9■□□□□ 0.46
LIMD2-207ENST00000579329 OR4D5Q8NGN0 318 aa17.9■□□□□ 0.46
LIMD2-207ENST00000579329 Q8WTZ3 238 aa17.9■□□□□ 0.46
LIMD2-207ENST00000579329 SLC35E1Q96K37 410 aa17.9■□□□□ 0.46
LIMD2-207ENST00000579329 TMEM231Q9H6L2 316 aa17.9■□□□□ 0.46
LIMD2-207ENST00000579329 ZMAT4Q9H898 229 aa17.9■□□□□ 0.46
LIMD2-207ENST00000579329 CD5P06127 495 aa17.89■□□□□ 0.45
LIMD2-207ENST00000579329 NPPCP23582 126 aa17.89■□□□□ 0.45
LIMD2-207ENST00000579329 NKX2-1P43699 371 aaPredicted RBP17.89■□□□□ 0.45
LIMD2-207ENST00000579329 ST8SIA2Q92186 375 aa17.89■□□□□ 0.45
LIMD2-207ENST00000579329 WWC2-AS2Q96NR7 200 aa17.89■□□□□ 0.45
LIMD2-207ENST00000579329 METTL26Q96S19 204 aa17.89■□□□□ 0.45
LIMD2-207ENST00000579329 TM2D3Q9BRN9 247 aa17.89■□□□□ 0.45
LIMD2-207ENST00000579329 VSIRQ9H7M9 311 aa17.89■□□□□ 0.45
LIMD2-207ENST00000579329 HAGHQ16775 308 aa17.88■□□□□ 0.45
LIMD2-207ENST00000579329 IAH1Q2TAA2 248 aaPredicted RBP17.88■□□□□ 0.45
LIMD2-207ENST00000579329 ZNF431Q8TF32 576 aaPredicted RBP17.88■□□□□ 0.45
LIMD2-207ENST00000579329 A0A1W2PS18 150 aa17.87■□□□□ 0.45
LIMD2-207ENST00000579329 APOHP02749 345 aaPredicted RBP17.87■□□□□ 0.45
LIMD2-207ENST00000579329 POLR2GP62487 172 aaKnown RBP eCLIP17.87■□□□□ 0.45
LIMD2-207ENST00000579329 FAM90A2PQ658T7 463 aa17.87■□□□□ 0.45
LIMD2-207ENST00000579329 LINC00322Q6ZN03 302 aaPredicted RBP17.87■□□□□ 0.45
LIMD2-207ENST00000579329 TCF24Q7RTU0 167 aa17.87■□□□□ 0.45
LIMD2-207ENST00000579329 NARS2Q96I59 477 aaKnown RBP17.87■□□□□ 0.45
LIMD2-207ENST00000579329 RCHY1Q96PM5 261 aa17.87■□□□□ 0.45
LIMD2-207ENST00000579329 SEC22CQ9BRL7 303 aa17.87■□□□□ 0.45
LIMD2-207ENST00000579329 TOMM40O96008 361 aa17.86■□□□□ 0.45
LIMD2-207ENST00000579329 CRYBB3P26998 211 aa17.86■□□□□ 0.45
LIMD2-207ENST00000579329 GAMTQ14353 236 aa17.86■□□□□ 0.45
LIMD2-207ENST00000579329 SPANXN5Q5MJ07 72 aa17.86■□□□□ 0.45
LIMD2-207ENST00000579329 ZBTB8BQ8NAP8 495 aaPredicted RBP17.86■□□□□ 0.45
LIMD2-207ENST00000579329 ENKURQ8TC29 256 aa17.86■□□□□ 0.45
LIMD2-207ENST00000579329 STRAPQ9Y3F4 350 aaKnown RBP17.86■□□□□ 0.45
LIMD2-207ENST00000579329 IGHV3-66A0A0C4DH42 116 aa17.85■□□□□ 0.45
LIMD2-207ENST00000579329 SPATA25Q9BR10 227 aa17.85■□□□□ 0.45
LIMD2-207ENST00000579329 RBMY1BA6NDE4 496 aaKnown RBP17.84■□□□□ 0.45
LIMD2-207ENST00000579329 RBMY1EA6NEQ0 496 aaKnown RBP17.84■□□□□ 0.45
LIMD2-207ENST00000579329 ZFP92A6NM28 416 aa17.84■□□□□ 0.45
LIMD2-207ENST00000579329 H3BP45 60 aa17.84■□□□□ 0.45
LIMD2-207ENST00000579329 SCGB1D2O95969 90 aa17.84■□□□□ 0.45
LIMD2-207ENST00000579329 RBMY1DP0C7P1 496 aaKnown RBP17.84■□□□□ 0.45
LIMD2-207ENST00000579329 RD3LP0DJH9 198 aa17.84■□□□□ 0.45
LIMD2-207ENST00000579329 PAFAH1B2P68402 229 aa17.84■□□□□ 0.45
LIMD2-207ENST00000579329 C12orf45Q8N5I9 185 aaPredicted RBP17.84■□□□□ 0.45
LIMD2-207ENST00000579329 FAM110AQ9BQ89 295 aa17.84■□□□□ 0.45
LIMD2-207ENST00000579329 GSKIPQ9P0R6 139 aa17.84■□□□□ 0.45
LIMD2-207ENST00000579329 UBQLN2Q9UHD9 624 aa17.84■□□□□ 0.45
LIMD2-207ENST00000579329 IGKV3-7A0A075B6H7 116 aa17.83■□□□□ 0.44
LIMD2-207ENST00000579329 SSSCA1O60232 199 aa17.83■□□□□ 0.44
LIMD2-207ENST00000579329 DFFBO76075 338 aa17.83■□□□□ 0.44
LIMD2-207ENST00000579329 IL4P05112 153 aa17.83■□□□□ 0.44
LIMD2-207ENST00000579329 HNRNPCP07910 306 aaKnown RBP eCLIP17.83■□□□□ 0.44
LIMD2-207ENST00000579329 TFPI2P48307 235 aa17.83■□□□□ 0.44
LIMD2-207ENST00000579329 IFITM3Q01628 133 aa17.83■□□□□ 0.44
LIMD2-207ENST00000579329 ODF3L2Q3SX64 289 aa17.83■□□□□ 0.44
LIMD2-207ENST00000579329 LILRB2Q8N423 598 aa17.83■□□□□ 0.44
LIMD2-207ENST00000579329 GRAMD2BQ96HH9 432 aa17.83■□□□□ 0.44
LIMD2-207ENST00000579329 PSENENQ9NZ42 101 aa17.83■□□□□ 0.44
LIMD2-207ENST00000579329 PRSS46E5RG02 174 aa17.82■□□□□ 0.44
LIMD2-207ENST00000579329 CCSO14618 274 aa17.82■□□□□ 0.44
LIMD2-207ENST00000579329 FABP1P07148 127 aa17.82■□□□□ 0.44
LIMD2-207ENST00000579329 PSG1P11464 419 aa17.82■□□□□ 0.44
LIMD2-207ENST00000579329 SMIM8Q96KF7 97 aa17.82■□□□□ 0.44
LIMD2-207ENST00000579329 IGKV1D-37A0A075B6S9 117 aa17.81■□□□□ 0.44
LIMD2-207ENST00000579329 IL5P05113 134 aa17.81■□□□□ 0.44
LIMD2-207ENST00000579329 P2RY1P47900 373 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms