RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 SLC24A4Q8NFF2 622 aa12.89□□□□□ -0.35
SLC9A3R1-203ENST00000578958 OR1S2Q8NGQ3 325 aa12.89□□□□□ -0.35
SLC9A3R1-203ENST00000578958 RNASEH2CQ8TDP1 164 aaKnown RBP12.89□□□□□ -0.35
SLC9A3R1-203ENST00000578958 MRPL36Q9P0J6 103 aaKnown RBP12.89□□□□□ -0.35
SLC9A3R1-203ENST00000578958 PLECQ15149 4684 aaKnown RBP12.89□□□□□ -0.35
SLC9A3R1-203ENST00000578958 SULT1A3P0DMM9 295 aa12.88□□□□□ -0.35
SLC9A3R1-203ENST00000578958 SULT1A4P0DMN0 295 aa12.88□□□□□ -0.35
SLC9A3R1-203ENST00000578958 CRYBB3P26998 211 aa12.88□□□□□ -0.35
SLC9A3R1-203ENST00000578958 TMBIM6P55061 237 aa12.88□□□□□ -0.35
SLC9A3R1-203ENST00000578958 BSXQ3C1V8 233 aa12.88□□□□□ -0.35
SLC9A3R1-203ENST00000578958 C2orf83Q53S99 150 aa12.88□□□□□ -0.35
SLC9A3R1-203ENST00000578958 PHLDA1Q8WV24 401 aaPredicted RBP12.88□□□□□ -0.35
SLC9A3R1-203ENST00000578958 BCL7BQ9BQE9 202 aa12.88□□□□□ -0.35
SLC9A3R1-203ENST00000578958 MFFQ9GZY8 342 aa12.88□□□□□ -0.35
SLC9A3R1-203ENST00000578958 HELTA6NFD8 242 aa12.87□□□□□ -0.35
SLC9A3R1-203ENST00000578958 IFNA4P05014 189 aa12.87□□□□□ -0.35
SLC9A3R1-203ENST00000578958 NPY1RP25929 384 aa12.87□□□□□ -0.35
SLC9A3R1-203ENST00000578958 OR10J1P30954 320 aa12.87□□□□□ -0.35
SLC9A3R1-203ENST00000578958 RND2P52198 227 aa12.87□□□□□ -0.35
SLC9A3R1-203ENST00000578958 AARDQ4LEZ3 155 aa12.87□□□□□ -0.35
SLC9A3R1-203ENST00000578958 C11orf45Q8TAV5 145 aa12.87□□□□□ -0.35
SLC9A3R1-203ENST00000578958 DYNC2LI1Q8TCX1 351 aa12.87□□□□□ -0.35
SLC9A3R1-203ENST00000578958 TMEM56-RWDD3S4R434 201 aa12.87□□□□□ -0.35
SLC9A3R1-203ENST00000578958 EPPK1P58107 5090 aaKnown RBP12.87□□□□□ -0.35
SLC9A3R1-203ENST00000578958 ANKRD20A5PA0PJZ0 165 aa12.86□□□□□ -0.35
SLC9A3R1-203ENST00000578958 FABP12A6NFH5 140 aa12.86□□□□□ -0.35
SLC9A3R1-203ENST00000578958 IFNA10P01566 189 aa12.86□□□□□ -0.35
SLC9A3R1-203ENST00000578958 IGKV1-17P01599 117 aa12.86□□□□□ -0.35
SLC9A3R1-203ENST00000578958 HNRNPCP07910 306 aaKnown RBP eCLIP12.86□□□□□ -0.35
SLC9A3R1-203ENST00000578958 ANXA3P12429 323 aa12.86□□□□□ -0.35
SLC9A3R1-203ENST00000578958 AKR1C4P17516 323 aa12.86□□□□□ -0.35
SLC9A3R1-203ENST00000578958 AP2S1P53680 142 aaPredicted RBP12.86□□□□□ -0.35
SLC9A3R1-203ENST00000578958 PRSS54Q6PEW0 395 aa12.86□□□□□ -0.35
SLC9A3R1-203ENST00000578958 FAM24BQ8N5W8 94 aa12.86□□□□□ -0.35
SLC9A3R1-203ENST00000578958 IL22RA2Q969J5 263 aa12.86□□□□□ -0.35
SLC9A3R1-203ENST00000578958 ACY3Q96HD9 319 aa12.86□□□□□ -0.35
SLC9A3R1-203ENST00000578958 FBXL17Q9UF56 701 aa12.86□□□□□ -0.35
SLC9A3R1-203ENST00000578958 K7EQG2 157 aa12.85□□□□□ -0.35
SLC9A3R1-203ENST00000578958 GSTZ1O43708 216 aaPredicted RBP12.85□□□□□ -0.35
SLC9A3R1-203ENST00000578958 ZNF688P0C7X2 276 aa12.85□□□□□ -0.35
SLC9A3R1-203ENST00000578958 FAUP35544 74 aaKnown RBP12.85□□□□□ -0.35
SLC9A3R1-203ENST00000578958 YPEL3P61236 119 aaPredicted RBP12.85□□□□□ -0.35
SLC9A3R1-203ENST00000578958 DHRS2Q13268 280 aa12.85□□□□□ -0.35
SLC9A3R1-203ENST00000578958 RBMS2Q15434 407 aaKnown RBP12.85□□□□□ -0.35
SLC9A3R1-203ENST00000578958 CENPSQ8N2Z9 138 aa12.85□□□□□ -0.35
SLC9A3R1-203ENST00000578958 PIGBOS1A0A0B4J2F0 54 aa12.84□□□□□ -0.35
SLC9A3R1-203ENST00000578958 IL4P05112 153 aa12.84□□□□□ -0.35
SLC9A3R1-203ENST00000578958 IGLC1P0CG04 106 aa12.84□□□□□ -0.35
SLC9A3R1-203ENST00000578958 CCR6P51684 374 aa12.84□□□□□ -0.35
SLC9A3R1-203ENST00000578958 TMEM41BQ5BJD5 291 aa12.84□□□□□ -0.35
SLC9A3R1-203ENST00000578958 MCFD2Q8NI22 146 aa12.84□□□□□ -0.35
SLC9A3R1-203ENST00000578958 NPIPB3Q92617 1050 aa12.84□□□□□ -0.35
SLC9A3R1-203ENST00000578958 C11orf68Q9H3H3 251 aaKnown RBP12.84□□□□□ -0.35
SLC9A3R1-203ENST00000578958 PRR13Q9NZ81 148 aa12.84□□□□□ -0.35
SLC9A3R1-203ENST00000578958 U3KQ87 197 aa12.84□□□□□ -0.35
SLC9A3R1-203ENST00000578958 A0A0B4J2A0 478 aa12.83□□□□□ -0.36
SLC9A3R1-203ENST00000578958 DEFB4AO15263 64 aa12.83□□□□□ -0.36
SLC9A3R1-203ENST00000578958 RD3LP0DJH9 198 aa12.83□□□□□ -0.36
SLC9A3R1-203ENST00000578958 NANOS2P60321 138 aaKnown RBP12.83□□□□□ -0.36
SLC9A3R1-203ENST00000578958 SRPXP78539 464 aa12.83□□□□□ -0.36
SLC9A3R1-203ENST00000578958 SMCO1Q147U7 214 aa12.83□□□□□ -0.36
SLC9A3R1-203ENST00000578958 MORN3Q6PF18 240 aaPredicted RBP12.83□□□□□ -0.36
SLC9A3R1-203ENST00000578958 LGI3Q8N145 548 aa12.83□□□□□ -0.36
SLC9A3R1-203ENST00000578958 SHPKQ9UHJ6 478 aa12.83□□□□□ -0.36
SLC9A3R1-203ENST00000578958 KNCNA6PVL3 124 aa12.82□□□□□ -0.36
SLC9A3R1-203ENST00000578958 SPP1P10451 314 aa12.82□□□□□ -0.36
SLC9A3R1-203ENST00000578958 TNFSF8P32971 234 aa12.82□□□□□ -0.36
SLC9A3R1-203ENST00000578958 AP3S2P59780 193 aa12.82□□□□□ -0.36
SLC9A3R1-203ENST00000578958 NMSQ5H8A3 153 aa12.82□□□□□ -0.36
SLC9A3R1-203ENST00000578958 ACTL10Q5JWF8 245 aa12.82□□□□□ -0.36
SLC9A3R1-203ENST00000578958 LYZL2Q7Z4W2 148 aa12.82□□□□□ -0.36
SLC9A3R1-203ENST00000578958 OR1S1Q8NH92 325 aa12.82□□□□□ -0.36
SLC9A3R1-203ENST00000578958 DTD1Q8TEA8 209 aa12.82□□□□□ -0.36
SLC9A3R1-203ENST00000578958 PFDN2Q9UHV9 154 aa12.82□□□□□ -0.36
SLC9A3R1-203ENST00000578958 TOMM40O96008 361 aa12.81□□□□□ -0.36
SLC9A3R1-203ENST00000578958 SNRPD3P62318 126 aaKnown RBP12.81□□□□□ -0.36
SLC9A3R1-203ENST00000578958 PYDC2Q56P42 97 aa12.81□□□□□ -0.36
SLC9A3R1-203ENST00000578958 PSMG4Q5JS54 123 aa12.81□□□□□ -0.36
SLC9A3R1-203ENST00000578958 C16orf54Q6UWD8 224 aa12.81□□□□□ -0.36
SLC9A3R1-203ENST00000578958 TMED4Q7Z7H5 227 aa12.81□□□□□ -0.36
SLC9A3R1-203ENST00000578958 TRPT1Q86TN4 253 aaKnown RBP12.81□□□□□ -0.36
SLC9A3R1-203ENST00000578958 DCANP1Q8TF63 244 aa12.81□□□□□ -0.36
SLC9A3R1-203ENST00000578958 SLIRPQ9GZT3 109 aaKnown RBP12.81□□□□□ -0.36
SLC9A3R1-203ENST00000578958 RBKSQ9H477 322 aa12.81□□□□□ -0.36
SLC9A3R1-203ENST00000578958 CCDC160A6NGH7 325 aa12.8□□□□□ -0.36
SLC9A3R1-203ENST00000578958 H3BMQ9 156 aa12.8□□□□□ -0.36
SLC9A3R1-203ENST00000578958 KLF9Q13886 244 aaPredicted RBP12.8□□□□□ -0.36
SLC9A3R1-203ENST00000578958 TOMM5Q8N4H5 51 aa12.8□□□□□ -0.36
SLC9A3R1-203ENST00000578958 PBDC1Q9BVG4 233 aa12.8□□□□□ -0.36
SLC9A3R1-203ENST00000578958 HSPB7Q9UBY9 170 aa12.8□□□□□ -0.36
SLC9A3R1-203ENST00000578958 U3KQE9 123 aa12.8□□□□□ -0.36
SLC9A3R1-203ENST00000578958 ZFP92A6NM28 416 aa12.79□□□□□ -0.36
SLC9A3R1-203ENST00000578958 PSG1P11464 419 aa12.79□□□□□ -0.36
SLC9A3R1-203ENST00000578958 NUP62P37198 522 aaPredicted RBP12.79□□□□□ -0.36
SLC9A3R1-203ENST00000578958 ATP5IP56385 69 aaPredicted RBP12.79□□□□□ -0.36
SLC9A3R1-203ENST00000578958 NUTF2P61970 127 aaKnown RBP12.79□□□□□ -0.36
SLC9A3R1-203ENST00000578958 USF2Q15853 346 aaPredicted RBP12.79□□□□□ -0.36
SLC9A3R1-203ENST00000578958 SIGLEC15Q6ZMC9 328 aa12.79□□□□□ -0.36
SLC9A3R1-203ENST00000578958 OR51G1Q8NGK1 321 aa12.79□□□□□ -0.36
SLC9A3R1-203ENST00000578958 C2CD4CQ8TF44 421 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms