RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 Q6ZTC4 211 aa6.47□□□□□ -1.37
GGA3-207ENST00000578896 SELENOHQ8IZQ5 122 aaKnown RBP6.47□□□□□ -1.37
GGA3-207ENST00000578896 CCDC71LQ8N9Z2 235 aa6.47□□□□□ -1.37
GGA3-207ENST00000578896 TMEM229BQ8NBD8 167 aa6.47□□□□□ -1.37
GGA3-207ENST00000578896 ZFAND1Q8TCF1 268 aa6.47□□□□□ -1.37
GGA3-207ENST00000578896 DCANP1Q8TF63 244 aa6.47□□□□□ -1.37
GGA3-207ENST00000578896 GLYATL2Q8WU03 294 aa6.47□□□□□ -1.37
GGA3-207ENST00000578896 SCRT1Q9BWW7 348 aa6.47□□□□□ -1.37
GGA3-207ENST00000578896 TMEM231Q9H6L2 316 aa6.47□□□□□ -1.37
GGA3-207ENST00000578896 HEYLQ9NQ87 328 aaPredicted RBP6.47□□□□□ -1.37
GGA3-207ENST00000578896 CACNG5Q9UF02 275 aa6.47□□□□□ -1.37
GGA3-207ENST00000578896 CELA1Q9UNI1 258 aa6.47□□□□□ -1.37
GGA3-207ENST00000578896 TEX13DA0A0J9YY54 714 aaPredicted RBP6.46□□□□□ -1.38
GGA3-207ENST00000578896 CEBPZOSA8MTT3 80 aa6.46□□□□□ -1.38
GGA3-207ENST00000578896 CORTO00230 105 aa6.46□□□□□ -1.38
GGA3-207ENST00000578896 CDS2O95674 445 aa6.46□□□□□ -1.38
GGA3-207ENST00000578896 IGLC1P0CG04 106 aa6.46□□□□□ -1.38
GGA3-207ENST00000578896 OR10J1P30954 320 aa6.46□□□□□ -1.38
GGA3-207ENST00000578896 RPL5P46777 297 aaKnown RBP6.46□□□□□ -1.38
GGA3-207ENST00000578896 TAS2R19P59542 299 aa6.46□□□□□ -1.38
GGA3-207ENST00000578896 USF2Q15853 346 aaPredicted RBP6.46□□□□□ -1.38
GGA3-207ENST00000578896 TMEM268Q5VZI3 342 aa6.46□□□□□ -1.38
GGA3-207ENST00000578896 AP3S1Q92572 193 aa6.46□□□□□ -1.38
GGA3-207ENST00000578896 NPIPB3Q92617 1050 aa6.46□□□□□ -1.38
GGA3-207ENST00000578896 ACY3Q96HD9 319 aa6.46□□□□□ -1.38
GGA3-207ENST00000578896 RAB40CQ96S21 281 aa6.46□□□□□ -1.38
GGA3-207ENST00000578896 MUC4Q99102 2169 aa6.46□□□□□ -1.38
GGA3-207ENST00000578896 TMEM222Q9H0R3 208 aa6.46□□□□□ -1.38
GGA3-207ENST00000578896 NAA60Q9H7X0 242 aa6.46□□□□□ -1.38
GGA3-207ENST00000578896 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.46□□□□□ -1.38
GGA3-207ENST00000578896 U3KQE9 123 aa6.46□□□□□ -1.38
GGA3-207ENST00000578896 PCLOQ9Y6V0 5065 aa6.46□□□□□ -1.38
GGA3-207ENST00000578896 RGS5O15539 181 aa6.45□□□□□ -1.38
GGA3-207ENST00000578896 GABARAPO95166 117 aa6.45□□□□□ -1.38
GGA3-207ENST00000578896 IL4P05112 153 aa6.45□□□□□ -1.38
GGA3-207ENST00000578896 HNRNPCP07910 306 aaKnown RBP eCLIP6.45□□□□□ -1.38
GGA3-207ENST00000578896 HTR2BP41595 481 aa6.45□□□□□ -1.38
GGA3-207ENST00000578896 FXYD7P58549 80 aa6.45□□□□□ -1.38
GGA3-207ENST00000578896 SPCS2Q15005 226 aa6.45□□□□□ -1.38
GGA3-207ENST00000578896 C16orf54Q6UWD8 224 aa6.45□□□□□ -1.38
GGA3-207ENST00000578896 CSNK1G2-AS1Q8NCQ2 148 aa6.45□□□□□ -1.38
GGA3-207ENST00000578896 SLC24A4Q8NFF2 622 aa6.45□□□□□ -1.38
GGA3-207ENST00000578896 OR4C16Q8NGL9 310 aa6.45□□□□□ -1.38
GGA3-207ENST00000578896 OR1S2Q8NGQ3 325 aa6.45□□□□□ -1.38
GGA3-207ENST00000578896 Q8WTZ3 238 aa6.45□□□□□ -1.38
GGA3-207ENST00000578896 GLMPQ8WWB7 406 aa6.45□□□□□ -1.38
GGA3-207ENST00000578896 GRAMD2BQ96HH9 432 aa6.45□□□□□ -1.38
GGA3-207ENST00000578896 NARS2Q96I59 477 aaKnown RBP6.45□□□□□ -1.38
GGA3-207ENST00000578896 XCL2Q9UBD3 114 aa6.45□□□□□ -1.38
GGA3-207ENST00000578896 TBC1D24Q9ULP9 559 aa6.45□□□□□ -1.38
GGA3-207ENST00000578896 C14orf166Q9Y224 244 aaKnown RBP6.45□□□□□ -1.38
GGA3-207ENST00000578896 IGHV4-4A0A075B6R2 117 aa6.44□□□□□ -1.38
GGA3-207ENST00000578896 TRAV30A0A087WSZ9 112 aa6.44□□□□□ -1.38
GGA3-207ENST00000578896 RPS10-NUDT3A0A1W2PQS6 291 aa6.44□□□□□ -1.38
GGA3-207ENST00000578896 HELTA6NFD8 242 aa6.44□□□□□ -1.38
GGA3-207ENST00000578896 CRYM-AS1A6NIL9 109 aa6.44□□□□□ -1.38
GGA3-207ENST00000578896 ZNF705EA8MWA4 302 aaPredicted RBP6.44□□□□□ -1.38
GGA3-207ENST00000578896 FAM90A26D6RGX4 464 aa6.44□□□□□ -1.38
GGA3-207ENST00000578896 GABARAPH6UMI1 98 aa6.44□□□□□ -1.38
GGA3-207ENST00000578896 IGKV3-20P01619 116 aa6.44□□□□□ -1.38
GGA3-207ENST00000578896 SPP1P10451 314 aa6.44□□□□□ -1.38
GGA3-207ENST00000578896 MIFP14174 115 aa6.44□□□□□ -1.38
GGA3-207ENST00000578896 TBPP20226 339 aa6.44□□□□□ -1.38
GGA3-207ENST00000578896 C12orf74Q32Q52 190 aa6.44□□□□□ -1.38
GGA3-207ENST00000578896 AARDQ4LEZ3 155 aa6.44□□□□□ -1.38
GGA3-207ENST00000578896 C2orf83Q53S99 150 aa6.44□□□□□ -1.38
GGA3-207ENST00000578896 GDF5OSQ5U4N7 250 aa6.44□□□□□ -1.38
GGA3-207ENST00000578896 MORN3Q6PF18 240 aaPredicted RBP6.44□□□□□ -1.38
GGA3-207ENST00000578896 OR51G1Q8NGK1 321 aa6.44□□□□□ -1.38
GGA3-207ENST00000578896 OR52E5Q8NH55 327 aa6.44□□□□□ -1.38
GGA3-207ENST00000578896 RBPMSQ93062 196 aaKnown RBP6.44□□□□□ -1.38
GGA3-207ENST00000578896 GPR132Q9UNW8 380 aa6.44□□□□□ -1.38
GGA3-207ENST00000578896 PKD1P98161 4303 aa6.44□□□□□ -1.38
GGA3-207ENST00000578896 TRAV10A0A0B4J240 114 aa6.43□□□□□ -1.38
GGA3-207ENST00000578896 DISC1C4P0D8 188 aa6.43□□□□□ -1.38
GGA3-207ENST00000578896 C11orf94C9JXX5 98 aa6.43□□□□□ -1.38
GGA3-207ENST00000578896 IFNA10P01566 189 aa6.43□□□□□ -1.38
GGA3-207ENST00000578896 RD3LP0DJH9 198 aa6.43□□□□□ -1.38
GGA3-207ENST00000578896 PSG1P11464 419 aa6.43□□□□□ -1.38
GGA3-207ENST00000578896 SLC25A4P12235 298 aa6.43□□□□□ -1.38
GGA3-207ENST00000578896 NPY1RP25929 384 aa6.43□□□□□ -1.38
GGA3-207ENST00000578896 EMP1P54849 157 aa6.43□□□□□ -1.38
GGA3-207ENST00000578896 YPEL3P61236 119 aaPredicted RBP6.43□□□□□ -1.38
GGA3-207ENST00000578896 IL18Q14116 193 aa6.43□□□□□ -1.38
GGA3-207ENST00000578896 FAM219AQ8IW50 185 aa6.43□□□□□ -1.38
GGA3-207ENST00000578896 OR51S1Q8NGJ8 323 aa6.43□□□□□ -1.38
GGA3-207ENST00000578896 RNASEH2CQ8TDP1 164 aaKnown RBP6.43□□□□□ -1.38
GGA3-207ENST00000578896 PBDC1Q9BVG4 233 aa6.43□□□□□ -1.38
GGA3-207ENST00000578896 HRH4Q9H3N8 390 aa6.43□□□□□ -1.38
GGA3-207ENST00000578896 PLA2G2EQ9NZK7 142 aa6.43□□□□□ -1.38
GGA3-207ENST00000578896 IGHV3OR16-12A0A075B7B8 117 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 DEFB131BA0A096LNP1 70 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 H3BMM0 161 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 M0R2N4 97 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 BUB3O43684 328 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 SCGB2A1O75556 95 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 TOMM40O96008 361 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 AKAIN1P0CW23 69 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 SULT1A3P0DMM9 295 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 SULT1A4P0DMN0 295 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms