RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 RABAC1Q9UI14 185 aa11.67□□□□□ -0.54
CRLF3-203ENST00000578692 NOL3O60936 208 aaKnown RBP11.66□□□□□ -0.54
CRLF3-203ENST00000578692 SLC25A4P12235 298 aa11.66□□□□□ -0.54
CRLF3-203ENST00000578692 LEMD1Q68G75 181 aa11.66□□□□□ -0.54
CRLF3-203ENST00000578692 PRSS54Q6PEW0 395 aa11.66□□□□□ -0.54
CRLF3-203ENST00000578692 FAM24BQ8N5W8 94 aa11.66□□□□□ -0.54
CRLF3-203ENST00000578692 OR1S2Q8NGQ3 325 aa11.66□□□□□ -0.54
CRLF3-203ENST00000578692 Q8WTZ3 238 aa11.66□□□□□ -0.54
CRLF3-203ENST00000578692 MCUBQ9NWR8 336 aa11.66□□□□□ -0.54
CRLF3-203ENST00000578692 H3BMQ9 156 aa11.65□□□□□ -0.55
CRLF3-203ENST00000578692 NXPH3O95157 252 aa11.65□□□□□ -0.55
CRLF3-203ENST00000578692 IGLC1P0CG04 106 aa11.65□□□□□ -0.55
CRLF3-203ENST00000578692 SULT1A3P0DMM9 295 aa11.65□□□□□ -0.55
CRLF3-203ENST00000578692 SULT1A4P0DMN0 295 aa11.65□□□□□ -0.55
CRLF3-203ENST00000578692 AKR1C4P17516 323 aa11.65□□□□□ -0.55
CRLF3-203ENST00000578692 P2RY1P47900 373 aa11.65□□□□□ -0.55
CRLF3-203ENST00000578692 RND2P52198 227 aa11.65□□□□□ -0.55
CRLF3-203ENST00000578692 RBMS2Q15434 407 aaKnown RBP11.65□□□□□ -0.55
CRLF3-203ENST00000578692 ETFRF1Q6IPR1 90 aa11.65□□□□□ -0.55
CRLF3-203ENST00000578692 NOXA1Q86UR1 476 aa11.65□□□□□ -0.55
CRLF3-203ENST00000578692 STXBP6Q8NFX7 210 aa11.65□□□□□ -0.55
CRLF3-203ENST00000578692 MCFD2Q8NI22 146 aa11.65□□□□□ -0.55
CRLF3-203ENST00000578692 GRAMD2BQ96HH9 432 aa11.65□□□□□ -0.55
CRLF3-203ENST00000578692 PRR13Q9NZ81 148 aa11.65□□□□□ -0.55
CRLF3-203ENST00000578692 K7EQG2 157 aa11.64□□□□□ -0.55
CRLF3-203ENST00000578692 CA1P00915 261 aaPredicted RBP11.64□□□□□ -0.55
CRLF3-203ENST00000578692 NPY1RP25929 384 aa11.64□□□□□ -0.55
CRLF3-203ENST00000578692 OR10J1P30954 320 aa11.64□□□□□ -0.55
CRLF3-203ENST00000578692 YPEL3P61236 119 aaPredicted RBP11.64□□□□□ -0.55
CRLF3-203ENST00000578692 NMSQ5H8A3 153 aa11.64□□□□□ -0.55
CRLF3-203ENST00000578692 STHQ8IWL8 128 aa11.64□□□□□ -0.55
CRLF3-203ENST00000578692 OR11H2Q8NH07 326 aa11.64□□□□□ -0.55
CRLF3-203ENST00000578692 TMEM170AQ8WVE7 144 aa11.64□□□□□ -0.55
CRLF3-203ENST00000578692 LINC00476Q8WZB0 136 aa11.64□□□□□ -0.55
CRLF3-203ENST00000578692 KRTAP3-3Q9BYR6 98 aa11.64□□□□□ -0.55
CRLF3-203ENST00000578692 KRTAP3-2Q9BYR7 98 aa11.64□□□□□ -0.55
CRLF3-203ENST00000578692 KLK5Q9Y337 293 aaPredicted RBP11.64□□□□□ -0.55
CRLF3-203ENST00000578692 PLECQ15149 4684 aaKnown RBP11.64□□□□□ -0.55
CRLF3-203ENST00000578692 A0A0B4J2A0 478 aa11.63□□□□□ -0.55
CRLF3-203ENST00000578692 LY6G6CO95867 125 aa11.63□□□□□ -0.55
CRLF3-203ENST00000578692 IFNA10P01566 189 aa11.63□□□□□ -0.55
CRLF3-203ENST00000578692 CCR6P51684 374 aa11.63□□□□□ -0.55
CRLF3-203ENST00000578692 SUPT4H1P63272 117 aaKnown RBP11.63□□□□□ -0.55
CRLF3-203ENST00000578692 LYZL2Q7Z4W2 148 aa11.63□□□□□ -0.55
CRLF3-203ENST00000578692 NPIPB3Q92617 1050 aa11.63□□□□□ -0.55
CRLF3-203ENST00000578692 SHPKQ9UHJ6 478 aa11.63□□□□□ -0.55
CRLF3-203ENST00000578692 U3KQ87 197 aa11.63□□□□□ -0.55
CRLF3-203ENST00000578692 U3KQE9 123 aa11.63□□□□□ -0.55
CRLF3-203ENST00000578692 HNRNPCP07910 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
CRLF3-203ENST00000578692 ANXA3P12429 323 aa11.62□□□□□ -0.55
CRLF3-203ENST00000578692 EIF2B2P49770 351 aaKnown RBP11.62□□□□□ -0.55
CRLF3-203ENST00000578692 SMCO1Q147U7 214 aa11.62□□□□□ -0.55
CRLF3-203ENST00000578692 LGI3Q8N145 548 aa11.62□□□□□ -0.55
CRLF3-203ENST00000578692 DCANP1Q8TF63 244 aa11.62□□□□□ -0.55
CRLF3-203ENST00000578692 HSPB7Q9UBY9 170 aa11.62□□□□□ -0.55
CRLF3-203ENST00000578692 ZNF688P0C7X2 276 aa11.61□□□□□ -0.55
CRLF3-203ENST00000578692 FAUP35544 74 aaKnown RBP11.61□□□□□ -0.55
CRLF3-203ENST00000578692 AP2S1P53680 142 aaPredicted RBP11.61□□□□□ -0.55
CRLF3-203ENST00000578692 C16orf54Q6UWD8 224 aa11.61□□□□□ -0.55
CRLF3-203ENST00000578692 DTD1Q8TEA8 209 aa11.61□□□□□ -0.55
CRLF3-203ENST00000578692 PHLDA1Q8WV24 401 aaPredicted RBP11.61□□□□□ -0.55
CRLF3-203ENST00000578692 ACY3Q96HD9 319 aa11.61□□□□□ -0.55
CRLF3-203ENST00000578692 RBKSQ9H477 322 aa11.61□□□□□ -0.55
CRLF3-203ENST00000578692 ALMS1Q8TCU4 4167 aa11.6□□□□□ -0.55
CRLF3-203ENST00000578692 HELTA6NFD8 242 aa11.6□□□□□ -0.55
CRLF3-203ENST00000578692 IL4P05112 153 aa11.6□□□□□ -0.55
CRLF3-203ENST00000578692 RD3LP0DJH9 198 aa11.6□□□□□ -0.55
CRLF3-203ENST00000578692 SRPXP78539 464 aa11.6□□□□□ -0.55
CRLF3-203ENST00000578692 DHRS2Q13268 280 aa11.6□□□□□ -0.55
CRLF3-203ENST00000578692 PYDC2Q56P42 97 aa11.6□□□□□ -0.55
CRLF3-203ENST00000578692 TRPT1Q86TN4 253 aaKnown RBP11.6□□□□□ -0.55
CRLF3-203ENST00000578692 C11orf45Q8TAV5 145 aa11.6□□□□□ -0.55
CRLF3-203ENST00000578692 C11orf68Q9H3H3 251 aaKnown RBP11.6□□□□□ -0.55
CRLF3-203ENST00000578692 EPPK1P58107 5090 aaKnown RBP11.6□□□□□ -0.55
CRLF3-203ENST00000578692 PIGBOS1A0A0B4J2F0 54 aa11.59□□□□□ -0.55
CRLF3-203ENST00000578692 TOMM40O96008 361 aa11.59□□□□□ -0.55
CRLF3-203ENST00000578692 AP3S2P59780 193 aa11.59□□□□□ -0.55
CRLF3-203ENST00000578692 KLF9Q13886 244 aaPredicted RBP11.59□□□□□ -0.55
CRLF3-203ENST00000578692 USF2Q15853 346 aaPredicted RBP11.59□□□□□ -0.55
CRLF3-203ENST00000578692 TOMM5Q8N4H5 51 aa11.59□□□□□ -0.55
CRLF3-203ENST00000578692 OR1S1Q8NH92 325 aa11.59□□□□□ -0.55
CRLF3-203ENST00000578692 GLMPQ8WWB7 406 aa11.59□□□□□ -0.55
CRLF3-203ENST00000578692 KNCNA6PVL3 124 aa11.58□□□□□ -0.56
CRLF3-203ENST00000578692 IFNA4P05014 189 aa11.58□□□□□ -0.56
CRLF3-203ENST00000578692 PSG1P11464 419 aa11.58□□□□□ -0.56
CRLF3-203ENST00000578692 ATP5IP56385 69 aaPredicted RBP11.58□□□□□ -0.56
CRLF3-203ENST00000578692 NANOS2P60321 138 aaKnown RBP11.58□□□□□ -0.56
CRLF3-203ENST00000578692 TMEM41BQ5BJD5 291 aa11.58□□□□□ -0.56
CRLF3-203ENST00000578692 TMEM128Q5BJH2 165 aa11.58□□□□□ -0.56
CRLF3-203ENST00000578692 MORN3Q6PF18 240 aaPredicted RBP11.58□□□□□ -0.56
CRLF3-203ENST00000578692 TMED4Q7Z7H5 227 aa11.58□□□□□ -0.56
CRLF3-203ENST00000578692 MFFQ9GZY8 342 aa11.58□□□□□ -0.56
CRLF3-203ENST00000578692 DEFB4AO15263 64 aa11.57□□□□□ -0.56
CRLF3-203ENST00000578692 BUB3O43684 328 aa11.57□□□□□ -0.56
CRLF3-203ENST00000578692 GIG44P09565 113 aaPredicted RBP11.57□□□□□ -0.56
CRLF3-203ENST00000578692 SPP1P10451 314 aa11.57□□□□□ -0.56
CRLF3-203ENST00000578692 ACTL10Q5JWF8 245 aa11.57□□□□□ -0.56
CRLF3-203ENST00000578692 TRIM63Q969Q1 353 aa11.57□□□□□ -0.56
CRLF3-203ENST00000578692 RAB40CQ96S21 281 aa11.57□□□□□ -0.56
CRLF3-203ENST00000578692 V9GYH0 126 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms