RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 TMEM50AO95807 157 aa9.61□□□□□ -0.87
CCDC57-211ENST00000578187 CD81P60033 236 aa9.61□□□□□ -0.87
CCDC57-211ENST00000578187 PRSS54Q6PEW0 395 aa9.61□□□□□ -0.87
CCDC57-211ENST00000578187 TMEM116Q8NCL8 245 aa9.61□□□□□ -0.87
CCDC57-211ENST00000578187 OR4D5Q8NGN0 318 aa9.61□□□□□ -0.87
CCDC57-211ENST00000578187 ENKURQ8TC29 256 aa9.61□□□□□ -0.87
CCDC57-211ENST00000578187 ZNF431Q8TF32 576 aaPredicted RBP9.61□□□□□ -0.87
CCDC57-211ENST00000578187 CIB3Q96Q77 187 aaPredicted RBP9.61□□□□□ -0.87
CCDC57-211ENST00000578187 SEC22CQ9BRL7 303 aa9.61□□□□□ -0.87
CCDC57-211ENST00000578187 IGHV3OR16-8A0A075B7F1 116 aa9.6□□□□□ -0.87
CCDC57-211ENST00000578187 IAPPP10997 89 aa9.6□□□□□ -0.87
CCDC57-211ENST00000578187 ID3Q02535 119 aa9.6□□□□□ -0.87
CCDC57-211ENST00000578187 HAGHQ16775 308 aa9.6□□□□□ -0.87
CCDC57-211ENST00000578187 ETFRF1Q6IPR1 90 aa9.6□□□□□ -0.87
CCDC57-211ENST00000578187 BTNL8Q6UX41 500 aa9.6□□□□□ -0.87
CCDC57-211ENST00000578187 ZNF600Q6ZNG1 722 aa9.6□□□□□ -0.87
CCDC57-211ENST00000578187 SLC16A13Q7RTY0 426 aa9.6□□□□□ -0.87
CCDC57-211ENST00000578187 TMEM61Q8N0U2 210 aa9.6□□□□□ -0.87
CCDC57-211ENST00000578187 C20orf24Q9BUV8 137 aa9.6□□□□□ -0.87
CCDC57-211ENST00000578187 MAGT1Q9H0U3 335 aa9.6□□□□□ -0.87
CCDC57-211ENST00000578187 TRAV30A0A087WSZ9 112 aa9.59□□□□□ -0.87
CCDC57-211ENST00000578187 ZNF785A8K8V0 405 aa9.59□□□□□ -0.87
CCDC57-211ENST00000578187 SCGB2A1O75556 95 aa9.59□□□□□ -0.87
CCDC57-211ENST00000578187 IGKV1-17P01599 117 aa9.59□□□□□ -0.87
CCDC57-211ENST00000578187 IL5P05113 134 aa9.59□□□□□ -0.87
CCDC57-211ENST00000578187 IGLC1P0CG04 106 aa9.59□□□□□ -0.87
CCDC57-211ENST00000578187 NKX2-1P43699 371 aaPredicted RBP9.59□□□□□ -0.87
CCDC57-211ENST00000578187 RND2P52198 227 aa9.59□□□□□ -0.87
CCDC57-211ENST00000578187 GUCA2BQ16661 112 aa9.59□□□□□ -0.87
CCDC57-211ENST00000578187 ZFAND6Q6FIF0 208 aa9.59□□□□□ -0.87
CCDC57-211ENST00000578187 TOMM20LQ6UXN7 152 aa9.59□□□□□ -0.87
CCDC57-211ENST00000578187 NRARPQ7Z6K4 114 aa9.59□□□□□ -0.87
CCDC57-211ENST00000578187 ZBTB8BQ8NAP8 495 aaPredicted RBP9.59□□□□□ -0.87
CCDC57-211ENST00000578187 OR1S2Q8NGQ3 325 aa9.59□□□□□ -0.87
CCDC57-211ENST00000578187 IL17DQ8TAD2 202 aa9.59□□□□□ -0.87
CCDC57-211ENST00000578187 NEURL2Q9BR09 285 aa9.59□□□□□ -0.87
CCDC57-211ENST00000578187 PUS1Q9Y606 427 aaKnown RBP eCLIP9.59□□□□□ -0.87
CCDC57-211ENST00000578187 TRAV25A0A0B4J276 109 aa9.58□□□□□ -0.88
CCDC57-211ENST00000578187 WRBO00258 174 aa9.58□□□□□ -0.88
CCDC57-211ENST00000578187 CCSO14618 274 aa9.58□□□□□ -0.88
CCDC57-211ENST00000578187 ZNF207O43670 478 aaKnown RBP9.58□□□□□ -0.88
CCDC57-211ENST00000578187 YIF1AO95070 293 aa9.58□□□□□ -0.88
CCDC57-211ENST00000578187 IFNA4P05014 189 aa9.58□□□□□ -0.88
CCDC57-211ENST00000578187 GPX4P36969 197 aaPredicted RBP9.58□□□□□ -0.88
CCDC57-211ENST00000578187 DEFA1P59665 94 aa9.58□□□□□ -0.88
CCDC57-211ENST00000578187 DEFA3P59666 94 aa9.58□□□□□ -0.88
CCDC57-211ENST00000578187 IAH1Q2TAA2 248 aaPredicted RBP9.58□□□□□ -0.88
CCDC57-211ENST00000578187 C12orf45Q8N5I9 185 aaPredicted RBP9.58□□□□□ -0.88
CCDC57-211ENST00000578187 WDR89Q96FK6 387 aaPredicted RBP9.58□□□□□ -0.88
CCDC57-211ENST00000578187 GINS3Q9BRX5 216 aa9.58□□□□□ -0.88
CCDC57-211ENST00000578187 EDA2RQ9HAV5 297 aa9.58□□□□□ -0.88
CCDC57-211ENST00000578187 SMPXQ9UHP9 88 aa9.58□□□□□ -0.88
CCDC57-211ENST00000578187 IGHV7-4-1A0A0J9YVY3 117 aa9.57□□□□□ -0.88
CCDC57-211ENST00000578187 PRSS46E5RG02 174 aa9.57□□□□□ -0.88
CCDC57-211ENST00000578187 SCAF4O95104 1147 aaKnown RBP9.57□□□□□ -0.88
CCDC57-211ENST00000578187 OR10J1P30954 320 aa9.57□□□□□ -0.88
CCDC57-211ENST00000578187 POLR2GP62487 172 aaKnown RBP eCLIP9.57□□□□□ -0.88
CCDC57-211ENST00000578187 RAB11AP62491 216 aa9.57□□□□□ -0.88
CCDC57-211ENST00000578187 RPP30P78346 268 aaKnown RBP9.57□□□□□ -0.88
CCDC57-211ENST00000578187 TIGITQ495A1 244 aa9.57□□□□□ -0.88
CCDC57-211ENST00000578187 NPIPB3Q92617 1050 aa9.57□□□□□ -0.88
CCDC57-211ENST00000578187 ACY3Q96HD9 319 aa9.57□□□□□ -0.88
CCDC57-211ENST00000578187 SELENOKQ9Y6D0 94 aa9.57□□□□□ -0.88
CCDC57-211ENST00000578187 HUWE1Q7Z6Z7 4374 aaKnown RBP9.56□□□□□ -0.88
CCDC57-211ENST00000578187 TRAV14DV4A0A0A6YYC5 116 aa9.56□□□□□ -0.88
CCDC57-211ENST00000578187 LCE6AA0A183 80 aa9.56□□□□□ -0.88
CCDC57-211ENST00000578187 H3BP45 60 aa9.56□□□□□ -0.88
CCDC57-211ENST00000578187 CHEK1O14757 476 aa9.56□□□□□ -0.88
CCDC57-211ENST00000578187 SSSCA1O60232 199 aa9.56□□□□□ -0.88
CCDC57-211ENST00000578187 YPEL3P61236 119 aaPredicted RBP9.56□□□□□ -0.88
CCDC57-211ENST00000578187 GAMTQ14353 236 aa9.56□□□□□ -0.88
CCDC57-211ENST00000578187 SPANXN5Q5MJ07 72 aa9.56□□□□□ -0.88
CCDC57-211ENST00000578187 MARVELD1Q9BSK0 173 aa9.56□□□□□ -0.88
CCDC57-211ENST00000578187 RCL1Q9Y2P8 373 aaKnown RBP9.56□□□□□ -0.88
CCDC57-211ENST00000578187 RYR3Q15413 4870 aa9.56□□□□□ -0.88
CCDC57-211ENST00000578187 STAB2Q8WWQ8 2551 aa9.55□□□□□ -0.88
CCDC57-211ENST00000578187 OR11H12B2RN74 326 aa9.55□□□□□ -0.88
CCDC57-211ENST00000578187 TSPAN4O14817 238 aa9.55□□□□□ -0.88
CCDC57-211ENST00000578187 PRAF2O60831 178 aa9.55□□□□□ -0.88
CCDC57-211ENST00000578187 SCGB1D2O95969 90 aa9.55□□□□□ -0.88
CCDC57-211ENST00000578187 TOMM40O96008 361 aa9.55□□□□□ -0.88
CCDC57-211ENST00000578187 CD7P09564 240 aa9.55□□□□□ -0.88
CCDC57-211ENST00000578187 PAX9P55771 341 aa9.55□□□□□ -0.88
CCDC57-211ENST00000578187 RBPMS2Q6ZRY4 209 aaKnown RBP9.55□□□□□ -0.88
CCDC57-211ENST00000578187 SLC35E1Q96K37 410 aa9.55□□□□□ -0.88
CCDC57-211ENST00000578187 SMIM8Q96KF7 97 aa9.55□□□□□ -0.88
CCDC57-211ENST00000578187 RAB40CQ96S21 281 aa9.55□□□□□ -0.88
CCDC57-211ENST00000578187 SPAG8Q99932 426 aaPredicted RBP9.55□□□□□ -0.88
CCDC57-211ENST00000578187 RHPN1-AS1Q9BWJ2 59 aa9.55□□□□□ -0.88
CCDC57-211ENST00000578187 VSIRQ9H7M9 311 aa9.55□□□□□ -0.88
CCDC57-211ENST00000578187 SRD5A3Q9H8P0 318 aa9.55□□□□□ -0.88
CCDC57-211ENST00000578187 GPN1Q9HCN4 374 aaPredicted RBP9.55□□□□□ -0.88
CCDC57-211ENST00000578187 GSKIPQ9P0R6 139 aa9.55□□□□□ -0.88
CCDC57-211ENST00000578187 STRAPQ9Y3F4 350 aaKnown RBP9.55□□□□□ -0.88
CCDC57-211ENST00000578187 IGKV1D-37A0A075B6S9 117 aa9.54□□□□□ -0.88
CCDC57-211ENST00000578187 IGHV3-49A0A0A0MS15 119 aa9.54□□□□□ -0.88
CCDC57-211ENST00000578187 PMS2P5A8MQ11 134 aa9.54□□□□□ -0.88
CCDC57-211ENST00000578187 SNRPGP15A8MWD9 76 aa9.54□□□□□ -0.88
CCDC57-211ENST00000578187 INMT-MINDY4F8WBC2 141 aa9.54□□□□□ -0.88
CCDC57-211ENST00000578187 TSC22D2O75157 780 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms