RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 ZFAND3Q9H8U3 227 aa17.61■□□□□ 0.41
SNF8-217ENST00000576353 COL7A1Q02388 2944 aa17.61■□□□□ 0.41
SNF8-217ENST00000576353 CD5P06127 495 aa17.6■□□□□ 0.41
SNF8-217ENST00000576353 IGLC1P0CG04 106 aa17.6■□□□□ 0.41
SNF8-217ENST00000576353 IAPPP10997 89 aa17.6■□□□□ 0.41
SNF8-217ENST00000576353 OR10J1P30954 320 aa17.6■□□□□ 0.41
SNF8-217ENST00000576353 RAB11AP62491 216 aa17.6■□□□□ 0.41
SNF8-217ENST00000576353 DEFB125Q8N687 156 aa17.6■□□□□ 0.41
SNF8-217ENST00000576353 MITD1Q8WV92 249 aa17.6■□□□□ 0.41
SNF8-217ENST00000576353 NPIPB3Q92617 1050 aa17.6■□□□□ 0.41
SNF8-217ENST00000576353 RNF2Q99496 336 aa17.6■□□□□ 0.41
SNF8-217ENST00000576353 IGHV3-49A0A0A0MS15 119 aa17.59■□□□□ 0.41
SNF8-217ENST00000576353 NPPCP23582 126 aa17.59■□□□□ 0.41
SNF8-217ENST00000576353 GPX4P36969 197 aaPredicted RBP17.59■□□□□ 0.41
SNF8-217ENST00000576353 YPEL3P61236 119 aaPredicted RBP17.59■□□□□ 0.41
SNF8-217ENST00000576353 Q8WTZ3 238 aa17.59■□□□□ 0.41
SNF8-217ENST00000576353 ACY3Q96HD9 319 aa17.59■□□□□ 0.41
SNF8-217ENST00000576353 MAGT1Q9H0U3 335 aa17.59■□□□□ 0.41
SNF8-217ENST00000576353 NUDT15Q9NV35 164 aa17.59■□□□□ 0.41
SNF8-217ENST00000576353 TRAV6A0A075B6T7 132 aa17.58■□□□□ 0.4
SNF8-217ENST00000576353 FAM240BA0A1B0GVZ2 78 aa17.58■□□□□ 0.4
SNF8-217ENST00000576353 OR4C46A6NHA9 309 aa17.58■□□□□ 0.4
SNF8-217ENST00000576353 ID3Q02535 119 aa17.58■□□□□ 0.4
SNF8-217ENST00000576353 METTL26Q96S19 204 aa17.58■□□□□ 0.4
SNF8-217ENST00000576353 TM2D3Q9BRN9 247 aa17.58■□□□□ 0.4
SNF8-217ENST00000576353 TMEM231Q9H6L2 316 aa17.58■□□□□ 0.4
SNF8-217ENST00000576353 SRD5A3Q9H8P0 318 aa17.58■□□□□ 0.4
SNF8-217ENST00000576353 IGHV3OR16-13A0A075B7E8 117 aa17.57■□□□□ 0.4
SNF8-217ENST00000576353 IGHV3-74A0A0B4J1X5 117 aa17.57■□□□□ 0.4
SNF8-217ENST00000576353 A0A1W2PS18 150 aa17.57■□□□□ 0.4
SNF8-217ENST00000576353 MPTX1A8MV57 137 aa17.57■□□□□ 0.4
SNF8-217ENST00000576353 WRBO00258 174 aa17.57■□□□□ 0.4
SNF8-217ENST00000576353 ASAH1Q13510 395 aa17.57■□□□□ 0.4
SNF8-217ENST00000576353 HAGHQ16775 308 aa17.57■□□□□ 0.4
SNF8-217ENST00000576353 SLC35E1Q96K37 410 aa17.57■□□□□ 0.4
SNF8-217ENST00000576353 WWC2-AS2Q96NR7 200 aa17.57■□□□□ 0.4
SNF8-217ENST00000576353 WFDC10AQ9H1F0 79 aa17.57■□□□□ 0.4
SNF8-217ENST00000576353 VSIRQ9H7M9 311 aa17.57■□□□□ 0.4
SNF8-217ENST00000576353 PAIP2BQ9ULR5 123 aaKnown RBP17.57■□□□□ 0.4
SNF8-217ENST00000576353 UPK1BO75841 260 aa17.56■□□□□ 0.4
SNF8-217ENST00000576353 NKX2-1P43699 371 aaPredicted RBP17.56■□□□□ 0.4
SNF8-217ENST00000576353 LINC00322Q6ZN03 302 aaPredicted RBP17.56■□□□□ 0.4
SNF8-217ENST00000576353 NARS2Q96I59 477 aaKnown RBP17.56■□□□□ 0.4
SNF8-217ENST00000576353 RCHY1Q96PM5 261 aa17.56■□□□□ 0.4
SNF8-217ENST00000576353 TBC1D24Q9ULP9 559 aa17.56■□□□□ 0.4
SNF8-217ENST00000576353 H2AFB2P0C5Z0 115 aa17.55■□□□□ 0.4
SNF8-217ENST00000576353 FAM90A2PQ658T7 463 aa17.55■□□□□ 0.4
SNF8-217ENST00000576353 OR4D5Q8NGN0 318 aa17.55■□□□□ 0.4
SNF8-217ENST00000576353 ST8SIA2Q92186 375 aa17.55■□□□□ 0.4
SNF8-217ENST00000576353 APOHP02749 345 aaPredicted RBP17.54■□□□□ 0.4
SNF8-217ENST00000576353 RD3LP0DJH9 198 aa17.54■□□□□ 0.4
SNF8-217ENST00000576353 CRYBB3P26998 211 aa17.54■□□□□ 0.4
SNF8-217ENST00000576353 PAFAH1B2P68402 229 aa17.54■□□□□ 0.4
SNF8-217ENST00000576353 GAMTQ14353 236 aa17.54■□□□□ 0.4
SNF8-217ENST00000576353 IAH1Q2TAA2 248 aaPredicted RBP17.54■□□□□ 0.4
SNF8-217ENST00000576353 SPANXN5Q5MJ07 72 aa17.54■□□□□ 0.4
SNF8-217ENST00000576353 TCF24Q7RTU0 167 aa17.54■□□□□ 0.4
SNF8-217ENST00000576353 ZNF431Q8TF32 576 aaPredicted RBP17.54■□□□□ 0.4
SNF8-217ENST00000576353 SPATA25Q9BR10 227 aa17.54■□□□□ 0.4
SNF8-217ENST00000576353 STRAPQ9Y3F4 350 aaKnown RBP17.54■□□□□ 0.4
SNF8-217ENST00000576353 RBMY1BA6NDE4 496 aaKnown RBP17.53■□□□□ 0.4
SNF8-217ENST00000576353 RBMY1EA6NEQ0 496 aaKnown RBP17.53■□□□□ 0.4
SNF8-217ENST00000576353 TOMM40O96008 361 aa17.53■□□□□ 0.4
SNF8-217ENST00000576353 RBMY1DP0C7P1 496 aaKnown RBP17.53■□□□□ 0.4
SNF8-217ENST00000576353 CMC4P56277 68 aaPredicted RBP17.53■□□□□ 0.4
SNF8-217ENST00000576353 POLR2GP62487 172 aaKnown RBP eCLIP17.53■□□□□ 0.4
SNF8-217ENST00000576353 FAM110AQ9BQ89 295 aa17.53■□□□□ 0.4
SNF8-217ENST00000576353 IGHV3-66A0A0C4DH42 116 aa17.52■□□□□ 0.4
SNF8-217ENST00000576353 ZFP92A6NM28 416 aa17.52■□□□□ 0.4
SNF8-217ENST00000576353 LILRB2Q8N423 598 aa17.52■□□□□ 0.4
SNF8-217ENST00000576353 GRAMD2BQ96HH9 432 aa17.52■□□□□ 0.4
SNF8-217ENST00000576353 GSKIPQ9P0R6 139 aa17.52■□□□□ 0.4
SNF8-217ENST00000576353 DNAH9Q9NYC9 4486 aa17.51■□□□□ 0.39
SNF8-217ENST00000576353 IGKV3-7A0A075B6H7 116 aa17.51■□□□□ 0.39
SNF8-217ENST00000576353 DFFBO76075 338 aa17.51■□□□□ 0.39
SNF8-217ENST00000576353 FABP1P07148 127 aa17.51■□□□□ 0.39
SNF8-217ENST00000576353 RPL11P62913 178 aaKnown RBP17.51■□□□□ 0.39
SNF8-217ENST00000576353 ZBTB8BQ8NAP8 495 aaPredicted RBP17.51■□□□□ 0.39
SNF8-217ENST00000576353 SEC22CQ9BRL7 303 aa17.51■□□□□ 0.39
SNF8-217ENST00000576353 PSENENQ9NZ42 101 aa17.51■□□□□ 0.39
SNF8-217ENST00000576353 UBQLN2Q9UHD9 624 aa17.51■□□□□ 0.39
SNF8-217ENST00000576353 SSSCA1O60232 199 aa17.5■□□□□ 0.39
SNF8-217ENST00000576353 IL4P05112 153 aa17.5■□□□□ 0.39
SNF8-217ENST00000576353 HNRNPCP07910 306 aaKnown RBP eCLIP17.5■□□□□ 0.39
SNF8-217ENST00000576353 PSG1P11464 419 aa17.5■□□□□ 0.39
SNF8-217ENST00000576353 TFPI2P48307 235 aa17.5■□□□□ 0.39
SNF8-217ENST00000576353 GBGT1Q8N5D6 347 aa17.5■□□□□ 0.39
SNF8-217ENST00000576353 C12orf45Q8N5I9 185 aaPredicted RBP17.5■□□□□ 0.39
SNF8-217ENST00000576353 OR51G1Q8NGK1 321 aa17.5■□□□□ 0.39
SNF8-217ENST00000576353 ENKURQ8TC29 256 aa17.5■□□□□ 0.39
SNF8-217ENST00000576353 SMIM8Q96KF7 97 aa17.5■□□□□ 0.39
SNF8-217ENST00000576353 LOC102724200A0A096LPH7 203 aaPredicted RBP17.49■□□□□ 0.39
SNF8-217ENST00000576353 H3BP45 60 aa17.49■□□□□ 0.39
SNF8-217ENST00000576353 DNASE2O00115 360 aaPredicted RBP17.49■□□□□ 0.39
SNF8-217ENST00000576353 SCGB1D2O95969 90 aa17.49■□□□□ 0.39
SNF8-217ENST00000576353 P2RY1P47900 373 aa17.49■□□□□ 0.39
SNF8-217ENST00000576353 ODF3L2Q3SX64 289 aa17.49■□□□□ 0.39
SNF8-217ENST00000576353 RAB40CQ96S21 281 aa17.49■□□□□ 0.39
SNF8-217ENST00000576353 GGTLC1Q9BX51 225 aa17.49■□□□□ 0.39
SNF8-217ENST00000576353 U3KQE9 123 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms