RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 S4R3C0 116 aa5.13□□□□□ -1.59
CTDNEP1-204ENST00000570484 MAST4O15021 2626 aa5.13□□□□□ -1.59
CTDNEP1-204ENST00000570484 TRAV30A0A087WSZ9 112 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 A0A1W2PRX2 142 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 OR2T8A6NH00 312 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 PRSS46E5RG02 174 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 K7EIM0 57 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 MPDU1O75352 247 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 JTBO76095 146 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 IGHV3-48P01763 117 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 TPT1P13693 172 aaKnown RBP5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 CXCL2P19875 107 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 OR10J1P30954 320 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 ARL3P36405 182 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 PROK1P58294 105 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 RELQ04864 619 aaPredicted RBP5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 GAMTQ14353 236 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 KRTAP24-1Q3LI83 254 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 AWAT1Q58HT5 328 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 PVRIGQ6DKI7 326 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 C10orf99Q6UWK7 81 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 BTNL8Q6UX41 500 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 CLEC19AQ6UXS0 136 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 TMUB2Q71RG4 321 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 TMEM144Q7Z5S9 345 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 HAPLN4Q86UW8 402 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 C9orf62Q8N4C0 152 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 RNF152Q8N8N0 203 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 HSD17B11Q8NBQ5 300 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 TMEM116Q8NCL8 245 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 OR4X1Q8NH49 305 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 ZNF502Q8TBZ5 544 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 C4orf3Q8WVX3 66 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 NPIPB3Q92617 1050 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 BSCL2Q96G97 398 aaPredicted RBP5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 UBE2E2Q96LR5 201 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 OR5B12Q96R08 314 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 ATP6V0BQ99437 205 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 TXN2Q99757 166 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 KLK15Q9H2R5 256 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 FNDC4Q9H6D8 234 aaPredicted RBP5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 NPVFQ9HCQ7 196 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 DMRT1Q9Y5R6 373 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 TSSC4Q9Y5U2 329 aaPredicted RBP5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 ZNF469Q96JG9 3925 aaPredicted RBP5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 TLN2Q9Y4G6 2542 aa5.12□□□□□ -1.59
CTDNEP1-204ENST00000570484 NSD1Q96L73 2696 aaPredicted RBP5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 SONP18583 2426 aaKnown RBP5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 KRTAP9-6A0A140TA67 174 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 SCO2A0A1W2PP80 73 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 PMS2P5A8MQ11 134 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 TGOLN2O43493 480 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 CLN5O75503 358 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 CD28P10747 220 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 CAMLGP49069 296 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 ARL16Q0P5N6 197 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 OPCMLQ14982 345 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 RPEL1Q2QD12 228 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 VWC2Q2TAL6 325 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 EIF5AL1Q6IS14 154 aaKnown RBP5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 SPSB3Q6PJ21 355 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 C12orf54Q6X4T0 127 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 S100A7AQ86SG5 101 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 PRIMA1Q86XR5 153 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 ZNF491Q8N8L2 437 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 BPIFCQ8NFQ6 507 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 DPF1Q92782 380 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 GNPNAT1Q96EK6 184 aaPredicted RBP5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 CITED2Q99967 270 aaPredicted RBP5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 NPCDR1Q9BY65 106 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 AP5S1Q9NUS5 200 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 PEF1Q9UBV8 284 aaKnown RBP5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 WDR83OSQ9Y284 106 aa5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 FN1P02751 2386 aaKnown RBP5.11□□□□□ -1.59
CTDNEP1-204ENST00000570484 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 LINC01619G3V211 115 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 AGPAT2O15120 278 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 GGCTO75223 188 aaKnown RBP5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 YIF1AO95070 293 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 ZP3P21754 424 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 S100A7P31151 101 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 FCGR2BP31994 310 aaPredicted RBP5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 CDX1P47902 265 aaPredicted RBP5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 RIPPLY3P57055 190 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 LYZP61626 148 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 SELENOTP62341 195 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 ZNF616Q08AN1 781 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 KLK9Q2XQG4 91 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 NSUN5P1Q3KNT7 163 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 TIGITQ495A1 244 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 RPL7L1Q6DKI1 246 aaKnown RBP5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 ZNF343Q6P1L6 599 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 Q6ZRG5 221 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 CYP2G1PQ6ZSU1 146 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 SLC51BQ86UW2 128 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 NDUFA11Q86Y39 141 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 LURAP1LQ8IV03 231 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 C3orf56Q8N813 242 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 MYOZ3Q8TDC0 251 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 NARS2Q96I59 477 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms