RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 CSTL1Q9H114 145 aa12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 HSPB7Q9UBY9 170 aa12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 U3KQE9 123 aa12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 IGHV3OR16-13A0A075B7E8 117 aa12.57□□□□□ -0.4
MAP1LC3B-208ENST00000570189 IGHV3-74A0A0B4J1X5 117 aa12.57□□□□□ -0.4
MAP1LC3B-208ENST00000570189 A0A0J9YWU9 116 aa12.57□□□□□ -0.4
MAP1LC3B-208ENST00000570189 DUXBA0A1W2PPF3 345 aa12.57□□□□□ -0.4
MAP1LC3B-208ENST00000570189 FAUP35544 74 aaKnown RBP12.57□□□□□ -0.4
MAP1LC3B-208ENST00000570189 KLF9Q13886 244 aaPredicted RBP12.57□□□□□ -0.4
MAP1LC3B-208ENST00000570189 MLANAQ16655 118 aa12.57□□□□□ -0.4
MAP1LC3B-208ENST00000570189 U3KQ87 197 aa12.57□□□□□ -0.4
MAP1LC3B-208ENST00000570189 CEBPZOSA8MTT3 80 aa12.56□□□□□ -0.4
MAP1LC3B-208ENST00000570189 MPTX1A8MV57 137 aa12.56□□□□□ -0.4
MAP1LC3B-208ENST00000570189 ANXA3P12429 323 aa12.56□□□□□ -0.4
MAP1LC3B-208ENST00000570189 RPL35AP18077 110 aaKnown RBP12.56□□□□□ -0.4
MAP1LC3B-208ENST00000570189 NPY1RP25929 384 aa12.56□□□□□ -0.4
MAP1LC3B-208ENST00000570189 AP3S2P59780 193 aa12.56□□□□□ -0.4
MAP1LC3B-208ENST00000570189 TMEM217Q8N7C4 229 aa12.56□□□□□ -0.4
MAP1LC3B-208ENST00000570189 V9GYH0 126 aa12.56□□□□□ -0.4
MAP1LC3B-208ENST00000570189 NUPR2A6NF83 97 aa12.55□□□□□ -0.4
MAP1LC3B-208ENST00000570189 K7EQG2 157 aa12.55□□□□□ -0.4
MAP1LC3B-208ENST00000570189 TFPI2P48307 235 aa12.55□□□□□ -0.4
MAP1LC3B-208ENST00000570189 SMCO1Q147U7 214 aa12.55□□□□□ -0.4
MAP1LC3B-208ENST00000570189 ZNF124Q15973 351 aa12.55□□□□□ -0.4
MAP1LC3B-208ENST00000570189 TIGITQ495A1 244 aa12.55□□□□□ -0.4
MAP1LC3B-208ENST00000570189 LGI3Q8N145 548 aa12.55□□□□□ -0.4
MAP1LC3B-208ENST00000570189 GBGT1Q8N5D6 347 aa12.55□□□□□ -0.4
MAP1LC3B-208ENST00000570189 NARS2Q96I59 477 aaKnown RBP12.55□□□□□ -0.4
MAP1LC3B-208ENST00000570189 MCUBQ9NWR8 336 aa12.55□□□□□ -0.4
MAP1LC3B-208ENST00000570189 IGKV3-7A0A075B6H7 116 aa12.54□□□□□ -0.4
MAP1LC3B-208ENST00000570189 ZNF701M0R085 212 aaPredicted RBP12.54□□□□□ -0.4
MAP1LC3B-208ENST00000570189 DNASE2O00115 360 aaPredicted RBP12.54□□□□□ -0.4
MAP1LC3B-208ENST00000570189 OR10J1P30954 320 aa12.54□□□□□ -0.4
MAP1LC3B-208ENST00000570189 P2RY1P47900 373 aa12.54□□□□□ -0.4
MAP1LC3B-208ENST00000570189 RND2P52198 227 aa12.54□□□□□ -0.4
MAP1LC3B-208ENST00000570189 EWSR1Q01844 656 aaKnown RBP eCLIP12.54□□□□□ -0.4
MAP1LC3B-208ENST00000570189 TMEM128Q5BJH2 165 aa12.54□□□□□ -0.4
MAP1LC3B-208ENST00000570189 LYZL2Q7Z4W2 148 aa12.54□□□□□ -0.4
MAP1LC3B-208ENST00000570189 LRTM2Q8N967 370 aa12.54□□□□□ -0.4
MAP1LC3B-208ENST00000570189 DCANP1Q8TF63 244 aa12.54□□□□□ -0.4
MAP1LC3B-208ENST00000570189 C11orf68Q9H3H3 251 aaKnown RBP12.54□□□□□ -0.4
MAP1LC3B-208ENST00000570189 AGRNO00468 2067 aa12.53□□□□□ -0.4
MAP1LC3B-208ENST00000570189 PITX3O75364 302 aa12.53□□□□□ -0.4
MAP1LC3B-208ENST00000570189 SLC25A6P12236 298 aa12.53□□□□□ -0.4
MAP1LC3B-208ENST00000570189 AKR1C4P17516 323 aa12.53□□□□□ -0.4
MAP1LC3B-208ENST00000570189 ZNF79Q15937 498 aa12.53□□□□□ -0.4
MAP1LC3B-208ENST00000570189 CCDC190Q86UF4 302 aa12.53□□□□□ -0.4
MAP1LC3B-208ENST00000570189 TOMM5Q8N4H5 51 aa12.53□□□□□ -0.4
MAP1LC3B-208ENST00000570189 DTD1Q8TEA8 209 aa12.53□□□□□ -0.4
MAP1LC3B-208ENST00000570189 Q8WTZ3 238 aa12.53□□□□□ -0.4
MAP1LC3B-208ENST00000570189 SLC25A21Q9BQT8 299 aaPredicted RBP12.53□□□□□ -0.4
MAP1LC3B-208ENST00000570189 RBM38Q9H0Z9 239 aaKnown RBP12.53□□□□□ -0.4
MAP1LC3B-208ENST00000570189 SEPSECSQ9HD40 501 aaKnown RBP12.53□□□□□ -0.4
MAP1LC3B-208ENST00000570189 IGHV3-66A0A0C4DH42 116 aa12.52□□□□□ -0.41
MAP1LC3B-208ENST00000570189 HELTA6NFD8 242 aa12.52□□□□□ -0.41
MAP1LC3B-208ENST00000570189 NXPH3O95157 252 aa12.52□□□□□ -0.41
MAP1LC3B-208ENST00000570189 TOMM40O96008 361 aa12.52□□□□□ -0.41
MAP1LC3B-208ENST00000570189 HNRNPCP07910 306 aaKnown RBP eCLIP12.52□□□□□ -0.41
MAP1LC3B-208ENST00000570189 EIF2B2P49770 351 aaKnown RBP12.52□□□□□ -0.41
MAP1LC3B-208ENST00000570189 AP2S1P53680 142 aaPredicted RBP12.52□□□□□ -0.41
MAP1LC3B-208ENST00000570189 DEFB131AP59861 70 aa12.52□□□□□ -0.41
MAP1LC3B-208ENST00000570189 TMEM41BQ5BJD5 291 aa12.52□□□□□ -0.41
MAP1LC3B-208ENST00000570189 C16orf54Q6UWD8 224 aa12.52□□□□□ -0.41
MAP1LC3B-208ENST00000570189 FAM24BQ8N5W8 94 aa12.52□□□□□ -0.41
MAP1LC3B-208ENST00000570189 GLMPQ8WWB7 406 aa12.52□□□□□ -0.41
MAP1LC3B-208ENST00000570189 FAM90A26D6RGX4 464 aa12.51□□□□□ -0.41
MAP1LC3B-208ENST00000570189 S100A5P33763 92 aa12.51□□□□□ -0.41
MAP1LC3B-208ENST00000570189 GPX4P36969 197 aaPredicted RBP12.51□□□□□ -0.41
MAP1LC3B-208ENST00000570189 RPL11P62913 178 aaKnown RBP12.51□□□□□ -0.41
MAP1LC3B-208ENST00000570189 RBMS2Q15434 407 aaKnown RBP12.51□□□□□ -0.41
MAP1LC3B-208ENST00000570189 CEMP1Q6PRD7 247 aaPredicted RBP12.51□□□□□ -0.41
MAP1LC3B-208ENST00000570189 RBKSQ9H477 322 aa12.51□□□□□ -0.41
MAP1LC3B-208ENST00000570189 PRR13Q9NZ81 148 aa12.51□□□□□ -0.41
MAP1LC3B-208ENST00000570189 IFNA10P01566 189 aa12.5□□□□□ -0.41
MAP1LC3B-208ENST00000570189 PYDC2Q56P42 97 aa12.5□□□□□ -0.41
MAP1LC3B-208ENST00000570189 TRPT1Q86TN4 253 aaKnown RBP12.5□□□□□ -0.41
MAP1LC3B-208ENST00000570189 STXBP6Q8NFX7 210 aa12.5□□□□□ -0.41
MAP1LC3B-208ENST00000570189 LINC00476Q8WZB0 136 aa12.5□□□□□ -0.41
MAP1LC3B-208ENST00000570189 NPIPB3Q92617 1050 aa12.5□□□□□ -0.41
MAP1LC3B-208ENST00000570189 RARRES2Q99969 163 aa12.5□□□□□ -0.41
MAP1LC3B-208ENST00000570189 RABAC1Q9UI14 185 aa12.5□□□□□ -0.41
MAP1LC3B-208ENST00000570189 EPPK1P58107 5090 aaKnown RBP12.49□□□□□ -0.41
MAP1LC3B-208ENST00000570189 CXorf65A6NEN9 183 aa12.49□□□□□ -0.41
MAP1LC3B-208ENST00000570189 BUB3O43684 328 aa12.49□□□□□ -0.41
MAP1LC3B-208ENST00000570189 IL4P05112 153 aa12.49□□□□□ -0.41
MAP1LC3B-208ENST00000570189 SPP1P10451 314 aa12.49□□□□□ -0.41
MAP1LC3B-208ENST00000570189 NUP62P37198 522 aaPredicted RBP12.49□□□□□ -0.41
MAP1LC3B-208ENST00000570189 USF2Q15853 346 aaPredicted RBP12.49□□□□□ -0.41
MAP1LC3B-208ENST00000570189 MORN3Q6PF18 240 aaPredicted RBP12.49□□□□□ -0.41
MAP1LC3B-208ENST00000570189 STHQ8IWL8 128 aa12.49□□□□□ -0.41
MAP1LC3B-208ENST00000570189 TMED3Q9Y3Q3 217 aa12.49□□□□□ -0.41
MAP1LC3B-208ENST00000570189 CA1P00915 261 aaPredicted RBP12.48□□□□□ -0.41
MAP1LC3B-208ENST00000570189 GIG44P09565 113 aaPredicted RBP12.48□□□□□ -0.41
MAP1LC3B-208ENST00000570189 RD3LP0DJH9 198 aa12.48□□□□□ -0.41
MAP1LC3B-208ENST00000570189 UBE2MP61081 183 aaKnown RBP12.48□□□□□ -0.41
MAP1LC3B-208ENST00000570189 LEMD1Q68G75 181 aa12.48□□□□□ -0.41
MAP1LC3B-208ENST00000570189 OR8G2PQ6IF36 304 aa12.48□□□□□ -0.41
MAP1LC3B-208ENST00000570189 OR11H2Q8NH07 326 aa12.48□□□□□ -0.41
MAP1LC3B-208ENST00000570189 OR1S1Q8NH92 325 aa12.48□□□□□ -0.41
MAP1LC3B-208ENST00000570189 PSG1P11464 419 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms