RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 SCARB1Q8WTV0 552 aa9.76□□□□□ -0.85
SPG7-221ENST00000569720 GPR146Q96CH1 333 aa9.76□□□□□ -0.85
SPG7-221ENST00000569720 CHRDL1Q9BU40 450 aa9.76□□□□□ -0.85
SPG7-221ENST00000569720 A0A0B4J293 547 aa9.75□□□□□ -0.85
SPG7-221ENST00000569720 KIR2DL5BA0A0G2JN68 375 aa9.75□□□□□ -0.85
SPG7-221ENST00000569720 KIR2DL5BA0A0G2JPC4 375 aa9.75□□□□□ -0.85
SPG7-221ENST00000569720 A0A0J9YWU9 116 aa9.75□□□□□ -0.85
SPG7-221ENST00000569720 PITX3O75364 302 aa9.75□□□□□ -0.85
SPG7-221ENST00000569720 HOXB5P09067 269 aa9.75□□□□□ -0.85
SPG7-221ENST00000569720 FGL1Q08830 312 aa9.75□□□□□ -0.85
SPG7-221ENST00000569720 DEFB135Q30KP9 77 aa9.75□□□□□ -0.85
SPG7-221ENST00000569720 NOXA1Q86UR1 476 aa9.75□□□□□ -0.85
SPG7-221ENST00000569720 KIR2DL5AQ8N109 375 aa9.75□□□□□ -0.85
SPG7-221ENST00000569720 KIR2DL5BQ8NHK3 375 aa9.75□□□□□ -0.85
SPG7-221ENST00000569720 LINC00476Q8WZB0 136 aa9.75□□□□□ -0.85
SPG7-221ENST00000569720 CIB3Q96Q77 187 aaPredicted RBP9.75□□□□□ -0.85
SPG7-221ENST00000569720 NSG2Q9Y328 171 aa9.75□□□□□ -0.85
SPG7-221ENST00000569720 C5orf51A6NDU8 294 aa9.74□□□□□ -0.85
SPG7-221ENST00000569720 C15orf62A8K5M9 175 aa9.74□□□□□ -0.85
SPG7-221ENST00000569720 NUPL2O15504 423 aaKnown RBP9.74□□□□□ -0.85
SPG7-221ENST00000569720 PET100P0DJ07 73 aa9.74□□□□□ -0.85
SPG7-221ENST00000569720 MFAP2P55001 183 aa9.74□□□□□ -0.85
SPG7-221ENST00000569720 CMC4P56277 68 aaPredicted RBP9.74□□□□□ -0.85
SPG7-221ENST00000569720 ID3Q02535 119 aa9.74□□□□□ -0.85
SPG7-221ENST00000569720 RELQ04864 619 aaPredicted RBP9.74□□□□□ -0.85
SPG7-221ENST00000569720 IAH1Q2TAA2 248 aaPredicted RBP9.74□□□□□ -0.85
SPG7-221ENST00000569720 ODF3L2Q3SX64 289 aa9.74□□□□□ -0.85
SPG7-221ENST00000569720 TMEM217Q8N7C4 229 aa9.74□□□□□ -0.85
SPG7-221ENST00000569720 OR1P1Q8NH06 330 aa9.74□□□□□ -0.85
SPG7-221ENST00000569720 OR1S1Q8NH92 325 aa9.74□□□□□ -0.85
SPG7-221ENST00000569720 HSPB7Q9UBY9 170 aa9.74□□□□□ -0.85
SPG7-221ENST00000569720 CACNG5Q9UF02 275 aa9.74□□□□□ -0.85
SPG7-221ENST00000569720 IGHV3OR16-8A0A075B7F1 116 aa9.73□□□□□ -0.85
SPG7-221ENST00000569720 K7EIM0 57 aa9.73□□□□□ -0.85
SPG7-221ENST00000569720 ZNF207O43670 478 aaKnown RBP9.73□□□□□ -0.85
SPG7-221ENST00000569720 LY6G6CO95867 125 aa9.73□□□□□ -0.85
SPG7-221ENST00000569720 RLN2P04090 185 aa9.73□□□□□ -0.85
SPG7-221ENST00000569720 ATF4P18848 351 aaPredicted RBP9.73□□□□□ -0.85
SPG7-221ENST00000569720 ADMP35318 185 aa9.73□□□□□ -0.85
SPG7-221ENST00000569720 TAS2R30P59541 319 aa9.73□□□□□ -0.85
SPG7-221ENST00000569720 RPP30P78346 268 aaKnown RBP9.73□□□□□ -0.85
SPG7-221ENST00000569720 RNF183Q96D59 192 aa9.73□□□□□ -0.85
SPG7-221ENST00000569720 ENY2Q9NPA8 101 aa9.73□□□□□ -0.85
SPG7-221ENST00000569720 MGAT4CQ9UBM8 478 aa9.73□□□□□ -0.85
SPG7-221ENST00000569720 SMPXQ9UHP9 88 aa9.73□□□□□ -0.85
SPG7-221ENST00000569720 KLK5Q9Y337 293 aaPredicted RBP9.73□□□□□ -0.85
SPG7-221ENST00000569720 IGHV7-4-1A0A0J9YVY3 117 aa9.72□□□□□ -0.85
SPG7-221ENST00000569720 F8W735 103 aaPredicted RBP9.72□□□□□ -0.85
SPG7-221ENST00000569720 ST8SIA3O43173 380 aa9.72□□□□□ -0.85
SPG7-221ENST00000569720 ADAP1O75689 374 aa9.72□□□□□ -0.85
SPG7-221ENST00000569720 YIF1AO95070 293 aa9.72□□□□□ -0.85
SPG7-221ENST00000569720 IFNA17P01571 189 aa9.72□□□□□ -0.85
SPG7-221ENST00000569720 CTSGP08311 255 aa9.72□□□□□ -0.85
SPG7-221ENST00000569720 GIPP09681 153 aaPredicted RBP9.72□□□□□ -0.85
SPG7-221ENST00000569720 RPL35AP18077 110 aaKnown RBP9.72□□□□□ -0.85
SPG7-221ENST00000569720 PVALBP20472 110 aaPredicted RBP9.72□□□□□ -0.85
SPG7-221ENST00000569720 NKX2-1P43699 371 aaPredicted RBP9.72□□□□□ -0.85
SPG7-221ENST00000569720 SUB1P53999 127 aaKnown RBP eCLIP9.72□□□□□ -0.85
SPG7-221ENST00000569720 MFAP4P55083 255 aa9.72□□□□□ -0.85
SPG7-221ENST00000569720 RAP2BP61225 183 aa9.72□□□□□ -0.85
SPG7-221ENST00000569720 ERHP84090 104 aaKnown RBP9.72□□□□□ -0.85
SPG7-221ENST00000569720 PRCDQ00LT1 54 aa9.72□□□□□ -0.85
SPG7-221ENST00000569720 IL15RAQ13261 267 aa9.72□□□□□ -0.85
SPG7-221ENST00000569720 CEMP1Q6PRD7 247 aaPredicted RBP9.72□□□□□ -0.85
SPG7-221ENST00000569720 ZBTB8BQ8NAP8 495 aaPredicted RBP9.72□□□□□ -0.85
SPG7-221ENST00000569720 TMEM116Q8NCL8 245 aa9.72□□□□□ -0.85
SPG7-221ENST00000569720 OR4D5Q8NGN0 318 aa9.72□□□□□ -0.85
SPG7-221ENST00000569720 MISP3Q96FF7 219 aa9.72□□□□□ -0.85
SPG7-221ENST00000569720 RAB40CQ96S21 281 aa9.72□□□□□ -0.85
SPG7-221ENST00000569720 TXN2Q99757 166 aa9.72□□□□□ -0.85
SPG7-221ENST00000569720 U3KQ87 197 aa9.72□□□□□ -0.85
SPG7-221ENST00000569720 WRBO00258 174 aa9.71□□□□□ -0.86
SPG7-221ENST00000569720 GOSR2O14653 212 aa9.71□□□□□ -0.86
SPG7-221ENST00000569720 FCGR2BP31994 310 aaPredicted RBP9.71□□□□□ -0.86
SPG7-221ENST00000569720 Q6ZRM9 215 aa9.71□□□□□ -0.86
SPG7-221ENST00000569720 OR10C1Q96KK4 312 aa9.71□□□□□ -0.86
SPG7-221ENST00000569720 RNF2Q99496 336 aa9.71□□□□□ -0.86
SPG7-221ENST00000569720 RHPN1-AS1Q9BWJ2 59 aa9.71□□□□□ -0.86
SPG7-221ENST00000569720 MAP6D1Q9H9H5 199 aa9.71□□□□□ -0.86
SPG7-221ENST00000569720 PRR13Q9NZ81 148 aa9.71□□□□□ -0.86
SPG7-221ENST00000569720 TRAV14DV4A0A0A6YYC5 116 aa9.7□□□□□ -0.86
SPG7-221ENST00000569720 A0A0G2JRQ6 117 aa9.7□□□□□ -0.86
SPG7-221ENST00000569720 FAM25EA8MYX2 175 aa9.7□□□□□ -0.86
SPG7-221ENST00000569720 CHEK1O14757 476 aa9.7□□□□□ -0.86
SPG7-221ENST00000569720 SYNGR2O43760 224 aa9.7□□□□□ -0.86
SPG7-221ENST00000569720 GNG7O60262 68 aa9.7□□□□□ -0.86
SPG7-221ENST00000569720 CD5P06127 495 aa9.7□□□□□ -0.86
SPG7-221ENST00000569720 BCAP31P51572 246 aa9.7□□□□□ -0.86
SPG7-221ENST00000569720 PAFAH1B2P68402 229 aa9.7□□□□□ -0.86
SPG7-221ENST00000569720 EWSR1Q01844 656 aaKnown RBP eCLIP9.7□□□□□ -0.86
SPG7-221ENST00000569720 FCN2Q15485 313 aa9.7□□□□□ -0.86
SPG7-221ENST00000569720 ZNF114Q8NC26 417 aa9.7□□□□□ -0.86
SPG7-221ENST00000569720 GINS3Q9BRX5 216 aa9.7□□□□□ -0.86
SPG7-221ENST00000569720 GSKIPQ9P0R6 139 aa9.7□□□□□ -0.86
SPG7-221ENST00000569720 IGKV3-7A0A075B6H7 116 aa9.69□□□□□ -0.86
SPG7-221ENST00000569720 MPTX1A8MV57 137 aa9.69□□□□□ -0.86
SPG7-221ENST00000569720 I3L2K1 104 aa9.69□□□□□ -0.86
SPG7-221ENST00000569720 CORTO00230 105 aa9.69□□□□□ -0.86
SPG7-221ENST00000569720 MT-CO2P00403 227 aa9.69□□□□□ -0.86
SPG7-221ENST00000569720 HTR2BP41595 481 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms