RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 CHAC2Q8WUX2 184 aa12.35□□□□□ -0.43
USB1-215ENST00000569252 CCDC140Q96MF4 163 aa12.35□□□□□ -0.43
USB1-215ENST00000569252 DUX3Q96PT4 197 aa12.35□□□□□ -0.43
USB1-215ENST00000569252 FNDC4Q9H6D8 234 aaPredicted RBP12.35□□□□□ -0.43
USB1-215ENST00000569252 NPVFQ9HCQ7 196 aa12.35□□□□□ -0.43
USB1-215ENST00000569252 ZFP92A6NM28 416 aa12.34□□□□□ -0.43
USB1-215ENST00000569252 G3V4G9 280 aa12.34□□□□□ -0.43
USB1-215ENST00000569252 OR2C1O95371 312 aa12.34□□□□□ -0.43
USB1-215ENST00000569252 OR10J1P30954 320 aa12.34□□□□□ -0.43
USB1-215ENST00000569252 DLK1P80370 383 aa12.34□□□□□ -0.43
USB1-215ENST00000569252 SLC38A11Q08AI6 406 aa12.34□□□□□ -0.43
USB1-215ENST00000569252 RAB31Q13636 194 aa12.34□□□□□ -0.43
USB1-215ENST00000569252 GAMTQ14353 236 aa12.34□□□□□ -0.43
USB1-215ENST00000569252 OR1S2Q8NGQ3 325 aa12.34□□□□□ -0.43
USB1-215ENST00000569252 C11orf1Q9H5F2 150 aa12.34□□□□□ -0.43
USB1-215ENST00000569252 FXYD6-FXYD2A0A087WZ82 144 aa12.33□□□□□ -0.44
USB1-215ENST00000569252 IGSF23A1L1A6 192 aa12.33□□□□□ -0.44
USB1-215ENST00000569252 ZNF320A2RRD8 509 aa12.33□□□□□ -0.44
USB1-215ENST00000569252 FNDC10F2Z333 226 aa12.33□□□□□ -0.44
USB1-215ENST00000569252 YIF1AO95070 293 aa12.33□□□□□ -0.44
USB1-215ENST00000569252 TRBV12-3P01733 135 aa12.33□□□□□ -0.44
USB1-215ENST00000569252 LYL1P12980 280 aa12.33□□□□□ -0.44
USB1-215ENST00000569252 CD33P20138 364 aa12.33□□□□□ -0.44
USB1-215ENST00000569252 HOXD3P31249 432 aaPredicted RBP12.33□□□□□ -0.44
USB1-215ENST00000569252 EWSR1Q01844 656 aaKnown RBP eCLIP12.33□□□□□ -0.44
USB1-215ENST00000569252 ACOT7LQ6ZUV0 252 aa12.33□□□□□ -0.44
USB1-215ENST00000569252 AKAP14Q86UN6 197 aa12.33□□□□□ -0.44
USB1-215ENST00000569252 Q8WTZ3 238 aa12.33□□□□□ -0.44
USB1-215ENST00000569252 TRAV14DV4A0A0A6YYC5 116 aa12.32□□□□□ -0.44
USB1-215ENST00000569252 PMS2P5A8MQ11 134 aa12.32□□□□□ -0.44
USB1-215ENST00000569252 BMPR1BO00238 502 aa12.32□□□□□ -0.44
USB1-215ENST00000569252 CTSGP08311 255 aa12.32□□□□□ -0.44
USB1-215ENST00000569252 NHLH2Q02577 135 aa12.32□□□□□ -0.44
USB1-215ENST00000569252 GPHB5Q86YW7 130 aa12.32□□□□□ -0.44
USB1-215ENST00000569252 ELOVL1Q9BW60 279 aa12.32□□□□□ -0.44
USB1-215ENST00000569252 UQCC1Q9NVA1 299 aa12.32□□□□□ -0.44
USB1-215ENST00000569252 PEMTQ9UBM1 199 aa12.32□□□□□ -0.44
USB1-215ENST00000569252 DNAH3Q8TD57 4116 aa12.32□□□□□ -0.44
USB1-215ENST00000569252 SLURP1P55000 103 aa12.31□□□□□ -0.44
USB1-215ENST00000569252 SYNJ2BPP57105 145 aa12.31□□□□□ -0.44
USB1-215ENST00000569252 TEPPQ6URK8 271 aa12.31□□□□□ -0.44
USB1-215ENST00000569252 ZNF600Q6ZNG1 722 aa12.31□□□□□ -0.44
USB1-215ENST00000569252 TMEM144Q7Z5S9 345 aa12.31□□□□□ -0.44
USB1-215ENST00000569252 OR5C1Q8NGR4 320 aa12.31□□□□□ -0.44
USB1-215ENST00000569252 NOTCH3Q9UM47 2321 aa12.31□□□□□ -0.44
USB1-215ENST00000569252 IGHV3-35A0A0C4DH35 117 aa12.3□□□□□ -0.44
USB1-215ENST00000569252 A0A1B0GVG6 124 aa12.3□□□□□ -0.44
USB1-215ENST00000569252 PRSS46E5RG02 174 aa12.3□□□□□ -0.44
USB1-215ENST00000569252 NDUFA4O00483 81 aa12.3□□□□□ -0.44
USB1-215ENST00000569252 OVOL1O14753 267 aa12.3□□□□□ -0.44
USB1-215ENST00000569252 DFFBO76075 338 aa12.3□□□□□ -0.44
USB1-215ENST00000569252 RD3LP0DJH9 198 aa12.3□□□□□ -0.44
USB1-215ENST00000569252 AP2S1P53680 142 aaPredicted RBP12.3□□□□□ -0.44
USB1-215ENST00000569252 ARL16Q0P5N6 197 aa12.3□□□□□ -0.44
USB1-215ENST00000569252 FHL3Q13643 280 aa12.3□□□□□ -0.44
USB1-215ENST00000569252 KLF5Q13887 457 aaPredicted RBP12.3□□□□□ -0.44
USB1-215ENST00000569252 TIGITQ495A1 244 aa12.3□□□□□ -0.44
USB1-215ENST00000569252 Q5BKY6 102 aa12.3□□□□□ -0.44
USB1-215ENST00000569252 CHRDL1Q9BU40 450 aa12.3□□□□□ -0.44
USB1-215ENST00000569252 MCRIP2Q9BUT9 160 aaKnown RBP12.3□□□□□ -0.44
USB1-215ENST00000569252 TMEM147Q9BVK8 224 aa12.3□□□□□ -0.44
USB1-215ENST00000569252 MRPL36Q9P0J6 103 aaKnown RBP12.3□□□□□ -0.44
USB1-215ENST00000569252 HSPB11Q9Y547 144 aa12.3□□□□□ -0.44
USB1-215ENST00000569252 F8W735 103 aaPredicted RBP12.29□□□□□ -0.44
USB1-215ENST00000569252 SMLR1H3BR10 107 aa12.29□□□□□ -0.44
USB1-215ENST00000569252 IFNA5P01569 189 aa12.29□□□□□ -0.44
USB1-215ENST00000569252 YPEL3P61236 119 aaPredicted RBP12.29□□□□□ -0.44
USB1-215ENST00000569252 SCGB1C1Q8TD33 95 aa12.29□□□□□ -0.44
USB1-215ENST00000569252 DLX4Q92988 240 aaPredicted RBP12.29□□□□□ -0.44
USB1-215ENST00000569252 GINS3Q9BRX5 216 aa12.29□□□□□ -0.44
USB1-215ENST00000569252 C20orf24Q9BUV8 137 aa12.29□□□□□ -0.44
USB1-215ENST00000569252 UFC1Q9Y3C8 167 aa12.29□□□□□ -0.44
USB1-215ENST00000569252 CFDP00746 253 aaPredicted RBP12.28□□□□□ -0.44
USB1-215ENST00000569252 IGLC1P0CG04 106 aa12.28□□□□□ -0.44
USB1-215ENST00000569252 S100A7P31151 101 aa12.28□□□□□ -0.44
USB1-215ENST00000569252 CLINT1Q14677 625 aa12.28□□□□□ -0.44
USB1-215ENST00000569252 HAPLN4Q86UW8 402 aa12.28□□□□□ -0.44
USB1-215ENST00000569252 TCTE3Q8IZS6 198 aa12.28□□□□□ -0.44
USB1-215ENST00000569252 LINC00482Q8N8I6 264 aa12.28□□□□□ -0.44
USB1-215ENST00000569252 AQP10Q96PS8 301 aa12.28□□□□□ -0.44
USB1-215ENST00000569252 TRGV9Q99603 122 aa12.28□□□□□ -0.44
USB1-215ENST00000569252 PFDN2Q9UHV9 154 aa12.28□□□□□ -0.44
USB1-215ENST00000569252 LGALS9O00182 355 aa12.27□□□□□ -0.45
USB1-215ENST00000569252 ARPC5O15511 151 aa12.27□□□□□ -0.45
USB1-215ENST00000569252 TOMM40O96008 361 aa12.27□□□□□ -0.45
USB1-215ENST00000569252 ADMP35318 185 aa12.27□□□□□ -0.45
USB1-215ENST00000569252 SELENOTP62341 195 aa12.27□□□□□ -0.45
USB1-215ENST00000569252 BEAN1Q3B7T3 259 aa12.27□□□□□ -0.45
USB1-215ENST00000569252 ZNF709Q8N972 641 aa12.27□□□□□ -0.45
USB1-215ENST00000569252 THAP8Q8NA92 274 aa12.27□□□□□ -0.45
USB1-215ENST00000569252 BPIFCQ8NFQ6 507 aa12.27□□□□□ -0.45
USB1-215ENST00000569252 OR9G4Q8NGQ1 327 aa12.27□□□□□ -0.45
USB1-215ENST00000569252 NARS2Q96I59 477 aaKnown RBP12.27□□□□□ -0.45
USB1-215ENST00000569252 ST6GAL2Q96JF0 529 aa12.27□□□□□ -0.45
USB1-215ENST00000569252 ATP5SQ99766 215 aa12.27□□□□□ -0.45
USB1-215ENST00000569252 GPR61Q9BZJ8 451 aa12.27□□□□□ -0.45
USB1-215ENST00000569252 SMIM3Q9BZL3 60 aa12.27□□□□□ -0.45
USB1-215ENST00000569252 MFFQ9GZY8 342 aa12.27□□□□□ -0.45
USB1-215ENST00000569252 TNFSF18Q9UNG2 199 aa12.27□□□□□ -0.45
USB1-215ENST00000569252 PUS1Q9Y606 427 aaKnown RBP eCLIP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms