RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 S100A10P60903 97 aa9.7□□□□□ -0.86
CDT1-203ENST00000569140 VAMP2P63027 116 aa9.7□□□□□ -0.86
CDT1-203ENST00000569140 ID3Q02535 119 aa9.7□□□□□ -0.86
CDT1-203ENST00000569140 DEFB114Q30KQ6 69 aa9.7□□□□□ -0.86
CDT1-203ENST00000569140 PRSS54Q6PEW0 395 aa9.7□□□□□ -0.86
CDT1-203ENST00000569140 RBPMS2Q6ZRY4 209 aaKnown RBP9.7□□□□□ -0.86
CDT1-203ENST00000569140 OR1S2Q8NGQ3 325 aa9.7□□□□□ -0.86
CDT1-203ENST00000569140 OR2K2Q8NGT1 345 aa9.7□□□□□ -0.86
CDT1-203ENST00000569140 MARC2Q969Z3 335 aa9.7□□□□□ -0.86
CDT1-203ENST00000569140 WDR89Q96FK6 387 aaPredicted RBP9.7□□□□□ -0.86
CDT1-203ENST00000569140 MRPL27Q9P0M9 148 aaKnown RBP9.7□□□□□ -0.86
CDT1-203ENST00000569140 RCL1Q9Y2P8 373 aaKnown RBP9.7□□□□□ -0.86
CDT1-203ENST00000569140 IGHV3OR16-13A0A075B7E8 117 aa9.69□□□□□ -0.86
CDT1-203ENST00000569140 IGHV3-74A0A0B4J1X5 117 aa9.69□□□□□ -0.86
CDT1-203ENST00000569140 SMCO3A2RU48 225 aa9.69□□□□□ -0.86
CDT1-203ENST00000569140 ZFP92A6NM28 416 aa9.69□□□□□ -0.86
CDT1-203ENST00000569140 PRAF2O60831 178 aa9.69□□□□□ -0.86
CDT1-203ENST00000569140 TOMM20LQ6UXN7 152 aa9.69□□□□□ -0.86
CDT1-203ENST00000569140 SMAD5-AS1Q9Y6J3 95 aa9.69□□□□□ -0.86
CDT1-203ENST00000569140 NOTCH1P46531 2555 aa9.68□□□□□ -0.86
CDT1-203ENST00000569140 TRAV14DV4A0A0A6YYC5 116 aa9.68□□□□□ -0.86
CDT1-203ENST00000569140 IGHV3-66A0A0C4DH42 116 aa9.68□□□□□ -0.86
CDT1-203ENST00000569140 SSNA1O43805 119 aa9.68□□□□□ -0.86
CDT1-203ENST00000569140 MBPP02686 304 aaPredicted RBP9.68□□□□□ -0.86
CDT1-203ENST00000569140 BMI1P35226 326 aa9.68□□□□□ -0.86
CDT1-203ENST00000569140 BCAP31P51572 246 aa9.68□□□□□ -0.86
CDT1-203ENST00000569140 CD81P60033 236 aa9.68□□□□□ -0.86
CDT1-203ENST00000569140 AKR1C1Q04828 323 aa9.68□□□□□ -0.86
CDT1-203ENST00000569140 OR8G2PQ6IF36 304 aa9.68□□□□□ -0.86
CDT1-203ENST00000569140 TMEM61Q8N0U2 210 aa9.68□□□□□ -0.86
CDT1-203ENST00000569140 TMEM116Q8NCL8 245 aa9.68□□□□□ -0.86
CDT1-203ENST00000569140 Q8WTZ3 238 aa9.68□□□□□ -0.86
CDT1-203ENST00000569140 C2orf50Q96LR7 162 aa9.68□□□□□ -0.86
CDT1-203ENST00000569140 RAB40CQ96S21 281 aa9.68□□□□□ -0.86
CDT1-203ENST00000569140 IGHV7-4-1A0A0J9YVY3 117 aa9.67□□□□□ -0.86
CDT1-203ENST00000569140 SNRPGP15A8MWD9 76 aa9.67□□□□□ -0.86
CDT1-203ENST00000569140 K7EMT4 169 aa9.67□□□□□ -0.86
CDT1-203ENST00000569140 SIX6O95475 246 aa9.67□□□□□ -0.86
CDT1-203ENST00000569140 IGLC1P0CG04 106 aa9.67□□□□□ -0.86
CDT1-203ENST00000569140 GPX4P36969 197 aaPredicted RBP9.67□□□□□ -0.86
CDT1-203ENST00000569140 GAMTQ14353 236 aa9.67□□□□□ -0.86
CDT1-203ENST00000569140 LAMTOR1Q6IAA8 161 aa9.67□□□□□ -0.86
CDT1-203ENST00000569140 NARS2Q96I59 477 aaKnown RBP9.67□□□□□ -0.86
CDT1-203ENST00000569140 SMIM8Q96KF7 97 aa9.67□□□□□ -0.86
CDT1-203ENST00000569140 METTL26Q96S19 204 aa9.67□□□□□ -0.86
CDT1-203ENST00000569140 MARVELD1Q9BSK0 173 aa9.67□□□□□ -0.86
CDT1-203ENST00000569140 RHPN1-AS1Q9BWJ2 59 aa9.67□□□□□ -0.86
CDT1-203ENST00000569140 ZFAND3Q9H8U3 227 aa9.67□□□□□ -0.86
CDT1-203ENST00000569140 DNAH3Q8TD57 4116 aa9.67□□□□□ -0.86
CDT1-203ENST00000569140 IGKV3-7A0A075B6H7 116 aa9.66□□□□□ -0.86
CDT1-203ENST00000569140 K7EPK0 472 aa9.66□□□□□ -0.86
CDT1-203ENST00000569140 PTTG1O95997 202 aa9.66□□□□□ -0.86
CDT1-203ENST00000569140 IGKV1-17P01599 117 aa9.66□□□□□ -0.86
CDT1-203ENST00000569140 IL4P05112 153 aa9.66□□□□□ -0.86
CDT1-203ENST00000569140 METTL15P1P0C7V9 234 aa9.66□□□□□ -0.86
CDT1-203ENST00000569140 C8orf88P0DMB2 117 aa9.66□□□□□ -0.86
CDT1-203ENST00000569140 PVALBP20472 110 aaPredicted RBP9.66□□□□□ -0.86
CDT1-203ENST00000569140 NPPCP23582 126 aa9.66□□□□□ -0.86
CDT1-203ENST00000569140 CAV2P51636 162 aa9.66□□□□□ -0.86
CDT1-203ENST00000569140 RRAS2P62070 204 aaPredicted RBP9.66□□□□□ -0.86
CDT1-203ENST00000569140 RPL11P62913 178 aaKnown RBP9.66□□□□□ -0.86
CDT1-203ENST00000569140 ACOT7LQ6ZUV0 252 aa9.66□□□□□ -0.86
CDT1-203ENST00000569140 PBDC1Q9BVG4 233 aa9.66□□□□□ -0.86
CDT1-203ENST00000569140 SMPXQ9UHP9 88 aa9.66□□□□□ -0.86
CDT1-203ENST00000569140 LSM4Q9Y4Z0 139 aaKnown RBP9.66□□□□□ -0.86
CDT1-203ENST00000569140 CHEK1O14757 476 aa9.65□□□□□ -0.86
CDT1-203ENST00000569140 CCNKO75909 580 aa9.65□□□□□ -0.86
CDT1-203ENST00000569140 FABP1P07148 127 aa9.65□□□□□ -0.86
CDT1-203ENST00000569140 RD3LP0DJH9 198 aa9.65□□□□□ -0.86
CDT1-203ENST00000569140 TFPI2P48307 235 aa9.65□□□□□ -0.86
CDT1-203ENST00000569140 YPEL3P61236 119 aaPredicted RBP9.65□□□□□ -0.86
CDT1-203ENST00000569140 OR2F1Q13607 317 aa9.65□□□□□ -0.86
CDT1-203ENST00000569140 LRRC37A5PQ49AS3 106 aa9.65□□□□□ -0.86
CDT1-203ENST00000569140 ST8SIA2Q92186 375 aa9.65□□□□□ -0.86
CDT1-203ENST00000569140 ZNF414Q96IQ9 312 aa9.65□□□□□ -0.86
CDT1-203ENST00000569140 RNF2Q99496 336 aa9.65□□□□□ -0.86
CDT1-203ENST00000569140 ASCL2Q99929 193 aa9.65□□□□□ -0.86
CDT1-203ENST00000569140 NEURL2Q9BR09 285 aa9.65□□□□□ -0.86
CDT1-203ENST00000569140 TMEM231Q9H6L2 316 aa9.65□□□□□ -0.86
CDT1-203ENST00000569140 TUBA4BQ9H853 241 aa9.65□□□□□ -0.86
CDT1-203ENST00000569140 MGAT4CQ9UBM8 478 aa9.65□□□□□ -0.86
CDT1-203ENST00000569140 TRAV25A0A0B4J276 109 aa9.64□□□□□ -0.87
CDT1-203ENST00000569140 C7orf66A4D0T2 115 aa9.64□□□□□ -0.87
CDT1-203ENST00000569140 ZNF785A8K8V0 405 aa9.64□□□□□ -0.87
CDT1-203ENST00000569140 TSC22D2O75157 780 aa9.64□□□□□ -0.87
CDT1-203ENST00000569140 TOMM40O96008 361 aa9.64□□□□□ -0.87
CDT1-203ENST00000569140 APOHP02749 345 aaPredicted RBP9.64□□□□□ -0.87
CDT1-203ENST00000569140 CD7P09564 240 aa9.64□□□□□ -0.87
CDT1-203ENST00000569140 PAX9P55771 341 aa9.64□□□□□ -0.87
CDT1-203ENST00000569140 TAS2R30P59541 319 aa9.64□□□□□ -0.87
CDT1-203ENST00000569140 LYZP61626 148 aa9.64□□□□□ -0.87
CDT1-203ENST00000569140 RAB32Q13637 225 aa9.64□□□□□ -0.87
CDT1-203ENST00000569140 OR10P1Q8NGE3 313 aa9.64□□□□□ -0.87
CDT1-203ENST00000569140 OR51G1Q8NGK1 321 aa9.64□□□□□ -0.87
CDT1-203ENST00000569140 GRAMD2BQ96HH9 432 aa9.64□□□□□ -0.87
CDT1-203ENST00000569140 A0A1W2PS18 150 aa9.63□□□□□ -0.87
CDT1-203ENST00000569140 HNRNPCP07910 306 aaKnown RBP eCLIP9.63□□□□□ -0.87
CDT1-203ENST00000569140 IGHV4-30-4P0DP06 118 aa9.63□□□□□ -0.87
CDT1-203ENST00000569140 PSG1P11464 419 aa9.63□□□□□ -0.87
CDT1-203ENST00000569140 ZNF90Q03938 601 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms