RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 SEC14L6B5MCN3 397 aa5.59□□□□□ -1.51
SMG1-215ENST00000568239 OR5G3P0C626 314 aa5.59□□□□□ -1.51
SMG1-215ENST00000568239 ORM2P19652 201 aa5.59□□□□□ -1.51
SMG1-215ENST00000568239 ZNF674Q2M3X9 581 aa5.59□□□□□ -1.51
SMG1-215ENST00000568239 C10orf91Q5T1B1 145 aa5.59□□□□□ -1.51
SMG1-215ENST00000568239 SPNS3Q6ZMD2 512 aa5.59□□□□□ -1.51
SMG1-215ENST00000568239 OR4F5Q8NH21 305 aa5.59□□□□□ -1.51
SMG1-215ENST00000568239 OR4X1Q8NH49 305 aa5.59□□□□□ -1.51
SMG1-215ENST00000568239 UHRF2Q96PU4 802 aa5.59□□□□□ -1.51
SMG1-215ENST00000568239 OR4F4Q96R69 305 aa5.59□□□□□ -1.51
SMG1-215ENST00000568239 HSPB9Q9BQS6 159 aa5.59□□□□□ -1.51
SMG1-215ENST00000568239 BEX4Q9NWD9 120 aaPredicted RBP5.59□□□□□ -1.51
SMG1-215ENST00000568239 TEX15Q9BXT5 2789 aa5.59□□□□□ -1.51
SMG1-215ENST00000568239 NOTCH2Q04721 2471 aa5.59□□□□□ -1.51
SMG1-215ENST00000568239 TCRBV4S1A1TA0A5B7 111 aa5.59□□□□□ -1.51
SMG1-215ENST00000568239 COX7A2P2O60397 106 aa5.59□□□□□ -1.51
SMG1-215ENST00000568239 OR7C2O60412 319 aa5.59□□□□□ -1.51
SMG1-215ENST00000568239 CXorf1O96002 111 aa5.59□□□□□ -1.51
SMG1-215ENST00000568239 MEF2BQ02080 365 aaPredicted RBP5.59□□□□□ -1.51
SMG1-215ENST00000568239 TM4SF20Q53R12 229 aa5.59□□□□□ -1.51
SMG1-215ENST00000568239 H3BUX3 64 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 TSPAN4O14817 238 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 STAG3L2P0CL84 134 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 STAG3L3P0CL85 134 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 UNQ5815/PRO19632Q6UWF5 114 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 CLRN3Q8NCR9 226 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 OR1B1Q8NGR6 318 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 NANPQ8TBE9 248 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 TMEM37Q8WXS4 190 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 SRSF8Q9BRL6 282 aaKnown RBP5.58□□□□□ -1.52
SMG1-215ENST00000568239 RPS10P5Q9NQ39 176 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 MANBALQ9NQG1 85 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 HECTD1Q9ULT8 2610 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 GCN1Q92616 2671 aaKnown RBP5.58□□□□□ -1.52
SMG1-215ENST00000568239 ITPR2Q14571 2701 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 IGKV1D-37A0A075B6S9 117 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 FAM74A7A6NL05 159 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 C11orf94C9JXX5 98 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 ATP6V0E1O15342 81 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 IGHV3-23P01764 117 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 CRYGCP07315 174 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 SNRPCP09234 159 aaKnown RBP5.58□□□□□ -1.52
SMG1-215ENST00000568239 OR10J4P0C629 311 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 GATA3P23771 443 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 LINC01559Q495D7 138 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 FAM74A3Q4VXF1 159 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 ASPHD1Q5U4P2 390 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 CBLN2Q8IUK8 224 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 LINC00469Q8N7U9 141 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 TMEM116Q8NCL8 245 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 RPUSD4Q96CM3 377 aaKnown RBP5.58□□□□□ -1.52
SMG1-215ENST00000568239 PSMG3-AS1Q96PY0 264 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 NIPSNAP3BQ9BS92 247 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 DNAJC4Q9NNZ3 241 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 LINC00527Q9UJ94 153 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 FUT9Q9Y231 359 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 CR1P17927 2039 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 TRAV5A0A0B4J249 113 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 MDFIC2A0A1B0GVS7 189 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 LINC01548A6NM66 108 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 I3L2K1 104 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 OR2J3O76001 311 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 HLA-DRB1P01911 266 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 CD81P60033 236 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 SELENOTP62341 195 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 TMEM249Q2WGJ8 235 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 AWAT1Q58HT5 328 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 C10orf113Q5VZT2 155 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 OR1L6Q8NGR2 347 aa5.58□□□□□ -1.52
SMG1-215ENST00000568239 ACANP16112 2415 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 ITPR3Q14573 2671 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 ZNF469Q96JG9 3925 aaPredicted RBP5.57□□□□□ -1.52
SMG1-215ENST00000568239 A0A096LNT2 108 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 ZNF727A8MUV8 499 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 G3V318 75 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 H3BQ15 152 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 K7EIM0 57 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 GCHFRP30047 84 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 ATP5G3P48201 142 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 TAS2R45P59539 299 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 LYZP61626 148 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 LOXL1Q08397 574 aaPredicted RBP5.57□□□□□ -1.52
SMG1-215ENST00000568239 MAJINQ3KP22 176 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 Q56UQ5 140 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 C5orf56Q8N8D9 126 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 THAP8Q8NA92 274 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 MEGF9Q9H1U4 602 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 TECRQ9NZ01 308 aaKnown RBP5.57□□□□□ -1.52
SMG1-215ENST00000568239 THYN1Q9P016 225 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 MOB4Q9Y3A3 225 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 FLNAP21333 2647 aaKnown RBP5.57□□□□□ -1.52
SMG1-215ENST00000568239 NPIPB5A8MRT5 1133 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 GNG7O60262 68 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 EGR2P11161 476 aaPredicted RBP5.57□□□□□ -1.52
SMG1-215ENST00000568239 TIGITQ495A1 244 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 MORN5Q5VZ52 161 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 PVRIGQ6DKI7 326 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 LINC00305Q7Z4B0 112 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 BCL6BQ8N143 479 aaPredicted RBP5.57□□□□□ -1.52
SMG1-215ENST00000568239 LRRC75A-AS1Q8N1F1 130 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms