RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SULT1A3P0DMM9 295 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 SULT1A4P0DMN0 295 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 ANXA3P12429 323 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 FAUP35544 74 aaKnown RBP3.55□□□□□ -1.84
CLK3-219ENST00000567805 AP3S2P59780 193 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 TMEM187Q14656 261 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 C2orf83Q53S99 150 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 TMEM268Q5VZI3 342 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 FAM90A2PQ658T7 463 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 CDPF1Q6NVV7 123 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 NOXA1Q86UR1 476 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 WFDC3Q8IUB2 231 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 KIR2DL5AQ8N109 375 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 KIR2DL5BQ8NHK3 375 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 RNASEH2CQ8TDP1 164 aaKnown RBP3.55□□□□□ -1.84
CLK3-219ENST00000567805 DEDD2Q8WXF8 326 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 ST8SIA2Q92186 375 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 IL22RA2Q969J5 263 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 GPR146Q96CH1 333 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 OVOL2Q9BRP0 275 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 FNDC4Q9H6D8 234 aaPredicted RBP3.55□□□□□ -1.84
CLK3-219ENST00000567805 TMEM231Q9H6L2 316 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 VSIRQ9H7M9 311 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 HEYLQ9NQ87 328 aaPredicted RBP3.55□□□□□ -1.84
CLK3-219ENST00000567805 MCUBQ9NWR8 336 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 CACNG5Q9UF02 275 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 PUS1Q9Y606 427 aaKnown RBP eCLIP3.55□□□□□ -1.84
CLK3-219ENST00000567805 IGKV3-7A0A075B6H7 116 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 IGHV3OR16-13A0A075B7E8 117 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 IGHV3-74A0A0B4J1X5 117 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 TRAV2A0A0B4J234 112 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 A0A0B4J2A0 478 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 LCE6AA0A183 80 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 A0A1B0GU03 582 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 A0A1W2PS18 150 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 CCDC160A6NGH7 325 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 CEBPZOSA8MTT3 80 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 ZNF701M0R085 212 aaPredicted RBP3.54□□□□□ -1.84
CLK3-219ENST00000567805 SPRY2O43597 315 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 DFFBO76075 338 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 APOHP02749 345 aaPredicted RBP3.54□□□□□ -1.84
CLK3-219ENST00000567805 SLC25A4P12235 298 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 AKR1C4P17516 323 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 RPL35AP18077 110 aaKnown RBP3.54□□□□□ -1.84
CLK3-219ENST00000567805 NPPCP23582 126 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 S100A5P33763 92 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 TFPI2P48307 235 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 CCR6P51684 374 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 SUPT4H1P63272 117 aaKnown RBP3.54□□□□□ -1.84
CLK3-219ENST00000567805 SRPXP78539 464 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 TNFRSF9Q07011 255 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 KLF9Q13886 244 aaPredicted RBP3.54□□□□□ -1.84
CLK3-219ENST00000567805 SMCO1Q147U7 214 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 DEFB135Q30KP9 77 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 PYDC2Q56P42 97 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 NMSQ5H8A3 153 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 ETFRF1Q6IPR1 90 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 TCF24Q7RTU0 167 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 APRG1Q8IVJ8 170 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 LGI3Q8N145 548 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 TOMM5Q8N4H5 51 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 STPG3Q8N7X2 389 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 SLC24A4Q8NFF2 622 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 TRIM63Q969Q1 353 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 TMEM230Q96A57 120 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 NARS2Q96I59 477 aaKnown RBP3.54□□□□□ -1.84
CLK3-219ENST00000567805 METTL26Q96S19 204 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 MS4A6AQ9H2W1 248 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 MAP6D1Q9H9H5 199 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 MRPL36Q9P0J6 103 aaKnown RBP3.54□□□□□ -1.84
CLK3-219ENST00000567805 HSPB7Q9UBY9 170 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 SHPKQ9UHJ6 478 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 U3KQ87 197 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 RYR2Q92736 4967 aa3.54□□□□□ -1.84
CLK3-219ENST00000567805 KMT2AQ03164 3969 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 IGHV3-66A0A0C4DH42 116 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 A0A0J9YWU9 116 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 DUXBA0A1W2PPF3 345 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 MPTX1A8MV57 137 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 DNASE2O00115 360 aaPredicted RBP3.53□□□□□ -1.84
CLK3-219ENST00000567805 JTBO76095 146 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 NXPH3O95157 252 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 SCGB1D2O95969 90 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 IGKV1-17P01599 117 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 IGLC1P0CG04 106 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 NPY1RP25929 384 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 CRYBB3P26998 211 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 OR10J1P30954 320 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 P2RY1P47900 373 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 EIF2B2P49770 351 aaKnown RBP3.53□□□□□ -1.84
CLK3-219ENST00000567805 RND2P52198 227 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 ATP5IP56385 69 aaPredicted RBP3.53□□□□□ -1.84
CLK3-219ENST00000567805 YPEL3P61236 119 aaPredicted RBP3.53□□□□□ -1.84
CLK3-219ENST00000567805 RPL11P62913 178 aaKnown RBP3.53□□□□□ -1.84
CLK3-219ENST00000567805 ZNF79Q15937 498 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 ZNF124Q15973 351 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 MLANAQ16655 118 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 TIGITQ495A1 244 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 TMEM128Q5BJH2 165 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 PRSS54Q6PEW0 395 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms