RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	SCO1	O75880	301 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	YIF1A	O95070	293 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	SNAPIN	O95295	136 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	TMEM50A	O95807	157 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	H2AFB2	P0C5Z0	115 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	OR5AC1	P0C628	307 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	C4BPB	P20851	252 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	NPBWR1	P48145	328 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	SPCS3	P61009	180 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	FAAP20	Q6NZ36	180 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635		Q6ZRM9	215 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	FAM219A	Q8IW50	185 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	SELENOH	Q8IZQ5	122 aa	Known RBP	5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	TMEM116	Q8NCL8	245 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	OR51S1	Q8NGJ8	323 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	PINX1	Q96BK5	328 aa	Known RBP	5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	SCGB3A2	Q96PL1	93 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	SPAG8	Q99932	426 aa	Predicted RBP	5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	WFDC10A	Q9H1F0	79 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	NAA60	Q9H7X0	242 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	EDA2R	Q9HAV5	297 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	SMPX	Q9UHP9	88 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	SCP2D1	Q9UJQ7	156 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	KCNIP3	Q9Y2W7	256 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	TRAV14DV4	A0A0A6YYC5	116 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	IGHV7-4-1	A0A0J9YVY3	117 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	CRYM-AS1	A6NIL9	109 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635		F8W036	122 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	CORT	O00230	105 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	CHEK1	O14757	476 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	IL5	P05113	134 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	RNASE2	P10153	161 aa	Known RBP	5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	CCR6	P51684	374 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	CMC4	P56277	68 aa	Predicted RBP	5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	AARD	Q4LEZ3	155 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	TMEM268	Q5VZI3	342 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	PVRIG	Q6DKI7	326 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	STX12	Q86Y82	276 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	OR52E5	Q8NH55	327 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	RBPMS	Q93062	196 aa	Known RBP	5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	GPR146	Q96CH1	333 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	OR10C1	Q96KK4	312 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	SLC25A21	Q9BQT8	299 aa	Predicted RBP	5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	RHPN1-AS1	Q9BWJ2	59 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	GGTLC1	Q9BX51	225 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	RETN	Q9HD89	108 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	MCUB	Q9NWR8	336 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	UBQLN2	Q9UHD9	624 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	DNAH9	Q9NYC9	4486 aa		5.16	□□□□□ -1.58
SF3B3-209	ENST00000567635	TRAV6	A0A075B6T7	132 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635		A0A0G2JRQ6	117 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	TMEM238L	A0A1B0GVL6	79 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	C7orf66	A4D0T2	115 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	OR4C46	A6NHA9	309 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	PRAF2	O60831	178 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	NDUFB6	O95139	128 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	CD5	P06127	495 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	AKR1C4	P17516	323 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	BMI1	P35226	326 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	NUP62	P37198	522 aa	Predicted RBP	5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	MLANA	Q16655	118 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	LCE2A	Q5TA79	106 aa	Predicted RBP	5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	ZFAND6	Q6FIF0	208 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	TEX261	Q6UWH6	196 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	TOMM20L	Q6UXN7	152 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	C9orf62	Q8N4C0	152 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	CLRN3	Q8NCR9	226 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	ZNF680	Q8NEM1	530 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	IL17D	Q8TAD2	202 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	IL22RA2	Q969J5	263 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	GALNT14	Q96FL9	552 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	ZNF414	Q96IQ9	312 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	RNF2	Q99496	336 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	C12orf57	Q99622	126 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	FAM110A	Q9BQ89	295 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	GINS3	Q9BRX5	216 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	HEYL	Q9NQ87	328 aa	Predicted RBP	5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	NUDT15	Q9NV35	164 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	MED9	Q9NWA0	146 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	CACNG5	Q9UF02	275 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	CACFD1	Q9UGQ2	172 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	ALG5	Q9Y673	324 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	TMEM56-RWDD3	S4R434	201 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635		U3KQ87	197 aa		5.15	□□□□□ -1.59
SF3B3-209	ENST00000567635	TRAV30	A0A087WSZ9	112 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	IGHV3-49	A0A0A0MS15	119 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	RPS10-NUDT3	A0A1W2PQS6	291 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	CEBPZOS	A8MTT3	80 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	UBE2C	O00762	179 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	TSC22D2	O75157	780 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	CLN5	O75503	358 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	SCGB2A1	O75556	95 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	IFNA4	P05014	189 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	SULT1A3	P0DMM9	295 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	SULT1A4	P0DMN0	295 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	NPPC	P23582	126 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	OPRK1	P41145	380 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	MEOX2	P50222	304 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	APOC4	P55056	127 aa		5.14	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 207.1 ms