RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 C15orf61A6NNL5 157 aa12.2□□□□□ -0.46
TSR3-202ENST00000566296 K7EIM0 57 aa12.2□□□□□ -0.46
TSR3-202ENST00000566296 NUPL2O15504 423 aaKnown RBP12.2□□□□□ -0.46
TSR3-202ENST00000566296 HOXB5P09067 269 aa12.2□□□□□ -0.46
TSR3-202ENST00000566296 SLC25A6P12236 298 aa12.2□□□□□ -0.46
TSR3-202ENST00000566296 MFAP2P55001 183 aa12.2□□□□□ -0.46
TSR3-202ENST00000566296 CMC4P56277 68 aaPredicted RBP12.2□□□□□ -0.46
TSR3-202ENST00000566296 PHLDA1Q8WV24 401 aaPredicted RBP12.2□□□□□ -0.46
TSR3-202ENST00000566296 GPR146Q96CH1 333 aa12.2□□□□□ -0.46
TSR3-202ENST00000566296 CACFD1Q9UGQ2 172 aa12.2□□□□□ -0.46
TSR3-202ENST00000566296 A0A0B4J293 547 aa12.19□□□□□ -0.46
TSR3-202ENST00000566296 A0A1B0GU03 582 aa12.19□□□□□ -0.46
TSR3-202ENST00000566296 F8W735 103 aaPredicted RBP12.19□□□□□ -0.46
TSR3-202ENST00000566296 SULT1A3P0DMM9 295 aa12.19□□□□□ -0.46
TSR3-202ENST00000566296 SULT1A4P0DMN0 295 aa12.19□□□□□ -0.46
TSR3-202ENST00000566296 FCGR2BP31994 310 aaPredicted RBP12.19□□□□□ -0.46
TSR3-202ENST00000566296 IZUMO4Q1ZYL8 232 aa12.19□□□□□ -0.46
TSR3-202ENST00000566296 GGNBP1Q5YKI7 109 aa12.19□□□□□ -0.46
TSR3-202ENST00000566296 TMEM116Q8NCL8 245 aa12.19□□□□□ -0.46
TSR3-202ENST00000566296 GATAD1Q8WUU5 269 aa12.19□□□□□ -0.46
TSR3-202ENST00000566296 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.19□□□□□ -0.46
TSR3-202ENST00000566296 TMEM14BQ9NUH8 114 aa12.19□□□□□ -0.46
TSR3-202ENST00000566296 CACNG5Q9UF02 275 aa12.19□□□□□ -0.46
TSR3-202ENST00000566296 SMPXQ9UHP9 88 aa12.19□□□□□ -0.46
TSR3-202ENST00000566296 ALG5Q9Y673 324 aa12.19□□□□□ -0.46
TSR3-202ENST00000566296 IGHV7-4-1A0A0J9YVY3 117 aa12.18□□□□□ -0.46
TSR3-202ENST00000566296 MPTX1A8MV57 137 aa12.18□□□□□ -0.46
TSR3-202ENST00000566296 SSNA1O43805 119 aa12.18□□□□□ -0.46
TSR3-202ENST00000566296 ADAP1O75689 374 aa12.18□□□□□ -0.46
TSR3-202ENST00000566296 YIF1AO95070 293 aa12.18□□□□□ -0.46
TSR3-202ENST00000566296 TFPI2P48307 235 aa12.18□□□□□ -0.46
TSR3-202ENST00000566296 SMCO1Q147U7 214 aa12.18□□□□□ -0.46
TSR3-202ENST00000566296 Q6ZRM9 215 aa12.18□□□□□ -0.46
TSR3-202ENST00000566296 APRG1Q8IVJ8 170 aa12.18□□□□□ -0.46
TSR3-202ENST00000566296 RPP25LQ8N5L8 163 aaKnown RBP12.18□□□□□ -0.46
TSR3-202ENST00000566296 OR1P1Q8NH06 330 aa12.18□□□□□ -0.46
TSR3-202ENST00000566296 MISP3Q96FF7 219 aa12.18□□□□□ -0.46
TSR3-202ENST00000566296 RNF2Q99496 336 aa12.18□□□□□ -0.46
TSR3-202ENST00000566296 PDCD10Q9BUL8 212 aa12.18□□□□□ -0.46
TSR3-202ENST00000566296 RHPN1-AS1Q9BWJ2 59 aa12.18□□□□□ -0.46
TSR3-202ENST00000566296 MFFQ9GZY8 342 aa12.18□□□□□ -0.46
TSR3-202ENST00000566296 CSTL1Q9H114 145 aa12.18□□□□□ -0.46
TSR3-202ENST00000566296 IGKV3-7A0A075B6H7 116 aa12.17□□□□□ -0.46
TSR3-202ENST00000566296 CHEK1O14757 476 aa12.17□□□□□ -0.46
TSR3-202ENST00000566296 MFAP4P55083 255 aa12.17□□□□□ -0.46
TSR3-202ENST00000566296 HSPE1P61604 102 aaKnown RBP12.17□□□□□ -0.46
TSR3-202ENST00000566296 AARDQ4LEZ3 155 aa12.17□□□□□ -0.46
TSR3-202ENST00000566296 LGALS9CQ6DKI2 356 aa12.17□□□□□ -0.46
TSR3-202ENST00000566296 IGHV3-49A0A0A0MS15 119 aa12.16□□□□□ -0.46
TSR3-202ENST00000566296 DEDDO75618 318 aa12.16□□□□□ -0.46
TSR3-202ENST00000566296 CTSGP08311 255 aa12.16□□□□□ -0.46
TSR3-202ENST00000566296 OR52E5Q8NH55 327 aa12.16□□□□□ -0.46
TSR3-202ENST00000566296 OR1S1Q8NH92 325 aa12.16□□□□□ -0.46
TSR3-202ENST00000566296 RARRES2Q99969 163 aa12.16□□□□□ -0.46
TSR3-202ENST00000566296 GINS3Q9BRX5 216 aa12.16□□□□□ -0.46
TSR3-202ENST00000566296 C11orf68Q9H3H3 251 aaKnown RBP12.16□□□□□ -0.46
TSR3-202ENST00000566296 FBXL17Q9UF56 701 aa12.16□□□□□ -0.46
TSR3-202ENST00000566296 ST8SIA3O43173 380 aa12.15□□□□□ -0.46
TSR3-202ENST00000566296 PITX3O75364 302 aa12.15□□□□□ -0.46
TSR3-202ENST00000566296 IFNA17P01571 189 aa12.15□□□□□ -0.46
TSR3-202ENST00000566296 IFNA4P05014 189 aa12.15□□□□□ -0.46
TSR3-202ENST00000566296 PAFAH1B2P68402 229 aa12.15□□□□□ -0.46
TSR3-202ENST00000566296 PRCDQ00LT1 54 aa12.15□□□□□ -0.46
TSR3-202ENST00000566296 ZNF124Q15973 351 aa12.15□□□□□ -0.46
TSR3-202ENST00000566296 GSG1LQ6UXU4 331 aa12.15□□□□□ -0.46
TSR3-202ENST00000566296 C11orf45Q8TAV5 145 aa12.15□□□□□ -0.46
TSR3-202ENST00000566296 OR10C1Q96KK4 312 aa12.15□□□□□ -0.46
TSR3-202ENST00000566296 TXN2Q99757 166 aa12.15□□□□□ -0.46
TSR3-202ENST00000566296 DNAH6Q9C0G6 4158 aa12.14□□□□□ -0.47
TSR3-202ENST00000566296 VPS13DQ5THJ4 4388 aa12.14□□□□□ -0.47
TSR3-202ENST00000566296 TRAV14DV4A0A0A6YYC5 116 aa12.14□□□□□ -0.47
TSR3-202ENST00000566296 C5orf51A6NDU8 294 aa12.14□□□□□ -0.47
TSR3-202ENST00000566296 FAM90A26D6RGX4 464 aa12.14□□□□□ -0.47
TSR3-202ENST00000566296 CCSO14618 274 aa12.14□□□□□ -0.47
TSR3-202ENST00000566296 GNG7O60262 68 aa12.14□□□□□ -0.47
TSR3-202ENST00000566296 MT-CO2P00403 227 aa12.14□□□□□ -0.47
TSR3-202ENST00000566296 CD5P06127 495 aa12.14□□□□□ -0.47
TSR3-202ENST00000566296 SPCS3P61009 180 aa12.14□□□□□ -0.47
TSR3-202ENST00000566296 IAH1Q2TAA2 248 aaPredicted RBP12.14□□□□□ -0.47
TSR3-202ENST00000566296 ZNF114Q8NC26 417 aa12.14□□□□□ -0.47
TSR3-202ENST00000566296 OR11H2Q8NH07 326 aa12.14□□□□□ -0.47
TSR3-202ENST00000566296 PINX1Q96BK5 328 aaKnown RBP12.14□□□□□ -0.47
TSR3-202ENST00000566296 HERC2O95714 4834 aa12.13□□□□□ -0.47
TSR3-202ENST00000566296 IGHV3OR16-13A0A075B7E8 117 aa12.13□□□□□ -0.47
TSR3-202ENST00000566296 IGHV3-74A0A0B4J1X5 117 aa12.13□□□□□ -0.47
TSR3-202ENST00000566296 FAM25EA8MYX2 175 aa12.13□□□□□ -0.47
TSR3-202ENST00000566296 I3L2K1 104 aa12.13□□□□□ -0.47
TSR3-202ENST00000566296 GOSR2O14653 212 aa12.13□□□□□ -0.47
TSR3-202ENST00000566296 CA1P00915 261 aaPredicted RBP12.13□□□□□ -0.47
TSR3-202ENST00000566296 NANOS2P60321 138 aaKnown RBP12.13□□□□□ -0.47
TSR3-202ENST00000566296 TCF24Q7RTU0 167 aa12.13□□□□□ -0.47
TSR3-202ENST00000566296 GBGT1Q8N5D6 347 aa12.13□□□□□ -0.47
TSR3-202ENST00000566296 C2orf50Q96LR7 162 aa12.13□□□□□ -0.47
TSR3-202ENST00000566296 MED28Q9H204 178 aa12.13□□□□□ -0.47
TSR3-202ENST00000566296 HSPB7Q9UBY9 170 aa12.13□□□□□ -0.47
TSR3-202ENST00000566296 INS-IGF2F8WCM5 200 aa12.12□□□□□ -0.47
TSR3-202ENST00000566296 DNASE2O00115 360 aaPredicted RBP12.12□□□□□ -0.47
TSR3-202ENST00000566296 MED6O75586 246 aa12.12□□□□□ -0.47
TSR3-202ENST00000566296 ERHP84090 104 aaKnown RBP12.12□□□□□ -0.47
TSR3-202ENST00000566296 FAM90A2PQ658T7 463 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms