RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 OR11H4Q8NGC9 324 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 OR1N2Q8NGR9 330 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 C4orf3Q8WVX3 66 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 ATP5SQ99766 215 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 CITED1Q99966 193 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 FBXL17Q9UF56 701 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 NF1P21359 2839 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 BORCS7-ASMTA0A0B4J1R7 106 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 UBE2L5PA0A1B0GUS4 154 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 LINC01619G3V211 115 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 I3L521 148 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 MPDU1O75352 247 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 ZP3P21754 424 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 FGF7P21781 194 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 EIF2B2P49770 351 aaKnown RBP6.02□□□□□ -1.45
CDH1-208ENST00000565810 KRTAP10-3P60369 221 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 CD300CQ08708 224 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 RPEL1Q2QD12 228 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 VWC2Q2TAL6 325 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 FAM106AQ4KMX7 169 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 C18orf65Q6ZTR6 163 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 C8orf86Q6ZUL3 223 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 KCNRGQ8N5I3 272 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 ZNF709Q8N972 641 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 OR11H1Q8NG94 326 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 OR4F17Q8NGA8 305 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 Q8WTZ3 238 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 CCDC140Q96MF4 163 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 OR4F4Q96R69 305 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 ARPC5LQ9BPX5 153 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 ARL6Q9H0F7 186 aa6.02□□□□□ -1.45
CDH1-208ENST00000565810 SETD2Q9BYW2 2564 aaPredicted RBP6.01□□□□□ -1.45
CDH1-208ENST00000565810 IGHV4OR15-8A0A075B7B6 117 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 A0A087WW49 117 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 PPP5D1E7EU14 171 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 C17orf112F2Z3M2 114 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 CCL24O00175 119 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 JTBO76095 146 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 YIF1AO95070 293 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 CFDP00746 253 aaPredicted RBP6.01□□□□□ -1.45
CDH1-208ENST00000565810 PF4P02776 101 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 HNRNPCP07910 306 aaKnown RBP eCLIP6.01□□□□□ -1.45
CDH1-208ENST00000565810 IGLC1P0CG04 106 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 RD3LP0DJH9 198 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 CXCL2P19875 107 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 MYCNOSP40205 109 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 EIF5AP63241 154 aaKnown RBP6.01□□□□□ -1.45
CDH1-208ENST00000565810 ZNF616Q08AN1 781 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 TIGITQ495A1 244 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 HIST2H2BDQ6DRA6 164 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 BTNL8Q6UX41 500 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 TREML4Q6UXN2 200 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 ZNF600Q6ZNG1 722 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 TMUB2Q71RG4 321 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 THAP8Q8NA92 274 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 PPP1R14BQ96C90 147 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 TRGV9Q99603 122 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 MRPL36Q9P0J6 103 aaKnown RBP6.01□□□□□ -1.45
CDH1-208ENST00000565810 WDR83OSQ9Y284 106 aa6.01□□□□□ -1.45
CDH1-208ENST00000565810 F8W735 103 aaPredicted RBP6□□□□□ -1.45
CDH1-208ENST00000565810 M0QZ24 198 aa6□□□□□ -1.45
CDH1-208ENST00000565810 BMPR1BO00238 502 aa6□□□□□ -1.45
CDH1-208ENST00000565810 BCL2L11O43521 198 aa6□□□□□ -1.45
CDH1-208ENST00000565810 OR2C1O95371 312 aa6□□□□□ -1.45
CDH1-208ENST00000565810 TOMM40O96008 361 aa6□□□□□ -1.45
CDH1-208ENST00000565810 TRBV12-3P01733 135 aa6□□□□□ -1.45
CDH1-208ENST00000565810 CTSGP08311 255 aa6□□□□□ -1.45
CDH1-208ENST00000565810 S100A7P31151 101 aa6□□□□□ -1.45
CDH1-208ENST00000565810 CAMLGP49069 296 aa6□□□□□ -1.45
CDH1-208ENST00000565810 YPEL3P61236 119 aaPredicted RBP6□□□□□ -1.45
CDH1-208ENST00000565810 SELENOTP62341 195 aa6□□□□□ -1.45
CDH1-208ENST00000565810 DEFB136Q30KP8 78 aa6□□□□□ -1.45
CDH1-208ENST00000565810 LGALSLQ3ZCW2 172 aaPredicted RBP6□□□□□ -1.45
CDH1-208ENST00000565810 Q6ZRG5 221 aa6□□□□□ -1.45
CDH1-208ENST00000565810 CYP2G1PQ6ZSU1 146 aa6□□□□□ -1.45
CDH1-208ENST00000565810 GPHB5Q86YW7 130 aa6□□□□□ -1.45
CDH1-208ENST00000565810 BPIFCQ8NFQ6 507 aa6□□□□□ -1.45
CDH1-208ENST00000565810 OR51G1Q8NGK1 321 aa6□□□□□ -1.45
CDH1-208ENST00000565810 CHRDL1Q9BU40 450 aa6□□□□□ -1.45
CDH1-208ENST00000565810 ZNF471Q9BX82 626 aaPredicted RBP6□□□□□ -1.45
CDH1-208ENST00000565810 PARD6GQ9BYG4 376 aaPredicted RBP6□□□□□ -1.45
CDH1-208ENST00000565810 WDR61Q9GZS3 305 aaKnown RBP6□□□□□ -1.45
CDH1-208ENST00000565810 WFDC1Q9HC57 220 aa6□□□□□ -1.45
CDH1-208ENST00000565810 KCNIP2Q9NS61 270 aa6□□□□□ -1.45
CDH1-208ENST00000565810 LSM4Q9Y4Z0 139 aaKnown RBP6□□□□□ -1.45
CDH1-208ENST00000565810 FBN1P35555 2871 aaKnown RBP6□□□□□ -1.45
CDH1-208ENST00000565810 IGKV1D-37A0A075B6S9 117 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 IGHV3-35A0A0C4DH35 117 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 ZNF320A2RRD8 509 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 ADARB2-AS1A8MUL3 147 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 NDUFA4O00483 81 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 AGPAT2O15120 278 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 IGKV1-17P01599 117 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 PSG1P11464 419 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 HOXD3P31249 432 aaPredicted RBP5.99□□□□□ -1.45
CDH1-208ENST00000565810 ADMP35318 185 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 ZNF90Q03938 601 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 OPCMLQ14982 345 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 KRTAP21-3Q3LHN1 58 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 RPL7L1Q6DKI1 246 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms