RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 LY6HO94772 140 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 IL6P05231 212 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 ATP5G1P05496 136 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 COX5BP10606 129 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 HIST1H1CP16403 213 aaKnown RBP1.19□□□□□ -2.22
PALB2-203ENST00000565038 ATP6V0CP27449 155 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 HSPA9P38646 679 aaKnown RBP1.19□□□□□ -2.22
PALB2-203ENST00000565038 CD200P41217 278 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 EMP2P54851 167 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 RWDD2BP57060 319 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 LINC00313P59037 77 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 RPL26P61254 145 aaKnown RBP1.19□□□□□ -2.22
PALB2-203ENST00000565038 DCDP81605 110 aaKnown RBP1.19□□□□□ -2.22
PALB2-203ENST00000565038 AKAP6Q13023 2319 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 EIF3IQ13347 325 aaKnown RBP1.19□□□□□ -2.22
PALB2-203ENST00000565038 GNA13Q14344 377 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 TAF1AQ15573 450 aaPredicted RBP1.19□□□□□ -2.22
PALB2-203ENST00000565038 MRPL51Q4U2R6 128 aaKnown RBP1.19□□□□□ -2.22
PALB2-203ENST00000565038 LCN8Q6JVE9 175 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 RASL11AQ6T310 242 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 Q6ZS92 163 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 SLC51BQ86UW2 128 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 NAA40Q86UY6 237 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 ADGRG4Q8IZF6 3080 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 ZFAND2AQ8N6M9 145 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 OR51H1Q8NH63 302 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 OR10D3Q8NH80 312 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 Q8WTZ3 238 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 EEF1AKMT1Q8WVE0 214 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 LCN9Q8WX39 176 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 TMBIM1Q969X1 311 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 SMIM19Q96E16 107 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 DCUN1D1Q96GG9 259 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 OR7D2Q96RA2 312 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 TBX5Q99593 518 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 SMR3AQ99954 134 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 TMEM109Q9BVC6 243 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 SLC22A4Q9H015 551 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 UCK1Q9HA47 277 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 SPANXB1Q9NS25 103 aaPredicted RBP1.19□□□□□ -2.22
PALB2-203ENST00000565038 FGFR1OP2Q9NVK5 253 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 RPL26L1Q9UNX3 145 aaKnown RBP1.19□□□□□ -2.22
PALB2-203ENST00000565038 TP53TG1Q9Y2A0 90 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 MYH10P35580 1976 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 KIAA1549LQ6ZVL6 1849 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 NBEAL1Q6ZS30 2694 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 JMJD1CQ15652 2540 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 MUC22E2RYF6 1773 aaPredicted RBP1.19□□□□□ -2.22
PALB2-203ENST00000565038 PCNX1Q96RV3 2341 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 ESPL1Q14674 2120 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 MYO7BQ6PIF6 2116 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 TNRC6AQ8NDV7 1962 aaKnown RBP1.18□□□□□ -2.22
PALB2-203ENST00000565038 CELSR1Q9NYQ6 3014 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 TRAV8-1A0A0A6YYK1 113 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 A0A0G2JMM0 328 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 A0A0J9YX75 114 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 A0A1W2PPB8 328 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 A0A1W2PRS3 328 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 KIR3DP1A8MWS1 328 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 C21orf140B9A014 251 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 E7EQ34 232 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 H0Y980 276 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 APOC4-APOC2K7ER74 178 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 OR2B3O76000 313 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 APOC2P02655 101 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 OCM2P0CE71 109 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 ARL14EPLP0DKL9 152 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 GZMBP10144 247 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 COX6A1P12074 109 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 MSNP26038 577 aaKnown RBP1.18□□□□□ -2.22
PALB2-203ENST00000565038 OR10J1P30954 320 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 CA7P43166 264 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 CAPZBP47756 277 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 SERPINB10P48595 397 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 CDC34P49427 236 aaPredicted RBP1.18□□□□□ -2.22
PALB2-203ENST00000565038 RPL14P50914 215 aaKnown RBP1.18□□□□□ -2.22
PALB2-203ENST00000565038 DAPP51397 102 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 TMEM33P57088 247 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 ZNF117Q03924 483 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 PTRHD1Q6GMV3 140 aaKnown RBP1.18□□□□□ -2.22
PALB2-203ENST00000565038 RASSF6Q6ZTQ3 369 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 GLT6D1Q7Z4J2 308 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 FAM19A5Q7Z5A7 132 aaPredicted RBP1.18□□□□□ -2.22
PALB2-203ENST00000565038 COMMD7Q86VX2 200 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 OOSP2Q86WS3 158 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 IQCF2Q8IXL9 164 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 PACRGLQ8N7B6 248 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 ASB13Q8WXK3 278 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 TSLPQ969D9 159 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 C12orf43Q96C57 262 aaKnown RBP1.18□□□□□ -2.22
PALB2-203ENST00000565038 MND1Q9BWT6 205 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 TRABDQ9H4I3 376 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 PROK2Q9HC23 129 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 SLC2A9Q9NRM0 540 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 UBQLN4Q9NRR5 601 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 EMC3Q9P0I2 261 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 C3orf18Q9UK00 162 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 GUCA1BQ9UMX6 200 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 AMMECR1Q9Y4X0 333 aaPredicted RBP1.18□□□□□ -2.22
PALB2-203ENST00000565038 POLR3HQ9Y535 204 aaPredicted RBP1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms