RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 CR1P17927 2039 aa15.4■□□□□ 0.06
CLN6-205ENST00000564846 PSMB11A5LHX3 300 aa15.39■□□□□ 0.05
CLN6-205ENST00000564846 CLN5O75503 358 aa15.39■□□□□ 0.05
CLN6-205ENST00000564846 AMY1AP04745 511 aa15.39■□□□□ 0.05
CLN6-205ENST00000564846 ARL14EPLP0DKL9 152 aa15.39■□□□□ 0.05
CLN6-205ENST00000564846 HIST1H1BP16401 226 aaKnown RBP15.39■□□□□ 0.05
CLN6-205ENST00000564846 GUCA2BQ16661 112 aa15.39■□□□□ 0.05
CLN6-205ENST00000564846 AKIRIN2Q53H80 203 aa15.39■□□□□ 0.05
CLN6-205ENST00000564846 UNQ5815/PRO19632Q6UWF5 114 aa15.39■□□□□ 0.05
CLN6-205ENST00000564846 C16orf82Q7Z2V1 217 aa15.39■□□□□ 0.05
CLN6-205ENST00000564846 IGLC1P0CG04 106 aa15.39■□□□□ 0.05
CLN6-205ENST00000564846 LY6EQ16553 131 aa15.39■□□□□ 0.05
CLN6-205ENST00000564846 KLK9Q2XQG4 91 aa15.39■□□□□ 0.05
CLN6-205ENST00000564846 SOHLH1Q5JUK2 328 aa15.39■□□□□ 0.05
CLN6-205ENST00000564846 SPATA31B1PQ5VZV4 182 aa15.39■□□□□ 0.05
CLN6-205ENST00000564846 SPNS3Q6ZMD2 512 aa15.39■□□□□ 0.05
CLN6-205ENST00000564846 WFDC11Q8NEX6 87 aa15.39■□□□□ 0.05
CLN6-205ENST00000564846 TMEM37Q8WXS4 190 aa15.39■□□□□ 0.05
CLN6-205ENST00000564846 TECRQ9NZ01 308 aaKnown RBP15.39■□□□□ 0.05
CLN6-205ENST00000564846 KLK9Q9UKQ9 250 aa15.39■□□□□ 0.05
CLN6-205ENST00000564846 COX7A2P2O60397 106 aa15.38■□□□□ 0.05
CLN6-205ENST00000564846 NDUFS6O75380 124 aaKnown RBP15.38■□□□□ 0.05
CLN6-205ENST00000564846 NPBWR1P48145 328 aa15.38■□□□□ 0.05
CLN6-205ENST00000564846 TAS2R45P59539 299 aa15.38■□□□□ 0.05
CLN6-205ENST00000564846 ECSCRQ19T08 205 aa15.38■□□□□ 0.05
CLN6-205ENST00000564846 DEFB112Q30KQ8 113 aa15.38■□□□□ 0.05
CLN6-205ENST00000564846 C9orf139Q6ZV77 190 aa15.38■□□□□ 0.05
CLN6-205ENST00000564846 MIR17HGQ75NE6 70 aa15.38■□□□□ 0.05
CLN6-205ENST00000564846 ZNF48Q96MX3 618 aaPredicted RBP15.38■□□□□ 0.05
CLN6-205ENST00000564846 FOXC2Q99958 501 aa15.38■□□□□ 0.05
CLN6-205ENST00000564846 ELOA3CA0A087WX78 387 aaPredicted RBP15.37■□□□□ 0.05
CLN6-205ENST00000564846 SH2D7A6NKC9 451 aaPredicted RBP15.37■□□□□ 0.05
CLN6-205ENST00000564846 SCO1O75880 301 aa15.37■□□□□ 0.05
CLN6-205ENST00000564846 SNAPINO95295 136 aa15.37■□□□□ 0.05
CLN6-205ENST00000564846 FABP1P07148 127 aa15.37■□□□□ 0.05
CLN6-205ENST00000564846 MEF2BQ02080 365 aaPredicted RBP15.37■□□□□ 0.05
CLN6-205ENST00000564846 MFAP4P55083 255 aa15.36■□□□□ 0.05
CLN6-205ENST00000564846 C10orf113Q5VZT2 155 aa15.36■□□□□ 0.05
CLN6-205ENST00000564846 BCL6BQ8N143 479 aaPredicted RBP15.36■□□□□ 0.05
CLN6-205ENST00000564846 CYB561D1Q8N8Q1 229 aa15.36■□□□□ 0.05
CLN6-205ENST00000564846 TRAV30A0A087WSZ9 112 aa15.36■□□□□ 0.05
CLN6-205ENST00000564846 MDFIC2A0A1B0GVS7 189 aa15.36■□□□□ 0.05
CLN6-205ENST00000564846 LINC01548A6NM66 108 aa15.36■□□□□ 0.05
CLN6-205ENST00000564846 GCHFRP30047 84 aa15.36■□□□□ 0.05
CLN6-205ENST00000564846 CRIP2P52943 208 aaPredicted RBP15.36■□□□□ 0.05
CLN6-205ENST00000564846 PQLC2Q6ZP29 291 aa15.36■□□□□ 0.05
CLN6-205ENST00000564846 NKX6-2Q9C056 277 aaPredicted RBP15.36■□□□□ 0.05
CLN6-205ENST00000564846 PRRC2AP48634 2157 aaKnown RBP15.35■□□□□ 0.05
CLN6-205ENST00000564846 PAGE4O60829 102 aa15.35■□□□□ 0.05
CLN6-205ENST00000564846 OR2J3O76001 311 aa15.35■□□□□ 0.05
CLN6-205ENST00000564846 C8orf88P0DMB2 117 aa15.35■□□□□ 0.05
CLN6-205ENST00000564846 PLP1P60201 277 aa15.35■□□□□ 0.05
CLN6-205ENST00000564846 ATRAIDQ6UW56 229 aa15.35■□□□□ 0.05
CLN6-205ENST00000564846 GSX1Q9H4S2 264 aaPredicted RBP15.35■□□□□ 0.05
CLN6-205ENST00000564846 C21orf62Q9NYP8 219 aa15.35■□□□□ 0.05
CLN6-205ENST00000564846 NDUFB8O95169 186 aa15.34■□□□□ 0.05
CLN6-205ENST00000564846 IGKV1-17P01599 117 aa15.34■□□□□ 0.05
CLN6-205ENST00000564846 CD81P60033 236 aa15.34■□□□□ 0.05
CLN6-205ENST00000564846 PATE2Q6UY27 113 aa15.34■□□□□ 0.05
CLN6-205ENST00000564846 DOK5Q9P104 306 aa15.34■□□□□ 0.05
CLN6-205ENST00000564846 FBXL7Q9UJT9 491 aa15.34■□□□□ 0.05
CLN6-205ENST00000564846 ABCA1O95477 2261 aa15.34■□□□□ 0.05
CLN6-205ENST00000564846 G3V318 75 aa15.34■□□□□ 0.05
CLN6-205ENST00000564846 IGHG2P01859 326 aa15.34■□□□□ 0.05
CLN6-205ENST00000564846 IGF1P05019 195 aa15.34■□□□□ 0.05
CLN6-205ENST00000564846 PSG1P11464 419 aa15.34■□□□□ 0.05
CLN6-205ENST00000564846 IER3P46695 156 aa15.34■□□□□ 0.05
CLN6-205ENST00000564846 CEBPGP53567 150 aa15.34■□□□□ 0.05
CLN6-205ENST00000564846 TIGITQ495A1 244 aa15.34■□□□□ 0.05
CLN6-205ENST00000564846 TEX29Q8N6K0 151 aa15.34■□□□□ 0.05
CLN6-205ENST00000564846 OR5R1Q8NH85 324 aa15.34■□□□□ 0.05
CLN6-205ENST00000564846 VN1R17PQ8TDU5 208 aa15.34■□□□□ 0.05
CLN6-205ENST00000564846 TXNDC17Q9BRA2 123 aa15.34■□□□□ 0.05
CLN6-205ENST00000564846 TMEM167BQ9NRX6 74 aa15.34■□□□□ 0.05
CLN6-205ENST00000564846 TRAV41A0A0B4J266 112 aa15.33■□□□□ 0.04
CLN6-205ENST00000564846 TMEM250H0YL14 139 aa15.33■□□□□ 0.04
CLN6-205ENST00000564846 GNG7O60262 68 aa15.33■□□□□ 0.04
CLN6-205ENST00000564846 HYPMO75409 117 aa15.33■□□□□ 0.04
CLN6-205ENST00000564846 SCGB2A1O75556 95 aa15.33■□□□□ 0.04
CLN6-205ENST00000564846 RD3LP0DJH9 198 aa15.33■□□□□ 0.04
CLN6-205ENST00000564846 ORM2P19652 201 aa15.33■□□□□ 0.04
CLN6-205ENST00000564846 FCGR2BP31994 310 aaPredicted RBP15.33■□□□□ 0.04
CLN6-205ENST00000564846 CIARTQ8N365 385 aaPredicted RBP15.33■□□□□ 0.04
CLN6-205ENST00000564846 OR1B1Q8NGR6 318 aa15.33■□□□□ 0.04
CLN6-205ENST00000564846 TXN2Q99757 166 aa15.33■□□□□ 0.04
CLN6-205ENST00000564846 CREBBPQ92793 2442 aa15.33■□□□□ 0.04
CLN6-205ENST00000564846 TRBV9A0A0B4J1U6 114 aa15.32■□□□□ 0.04
CLN6-205ENST00000564846 C11orf94C9JXX5 98 aa15.32■□□□□ 0.04
CLN6-205ENST00000564846 IGHV4-59P01825 116 aa15.32■□□□□ 0.04
CLN6-205ENST00000564846 C19orf54Q5BKX5 351 aa15.32■□□□□ 0.04
CLN6-205ENST00000564846 C9orf152Q5JTZ5 239 aa15.32■□□□□ 0.04
CLN6-205ENST00000564846 CLRN3Q8NCR9 226 aa15.32■□□□□ 0.04
CLN6-205ENST00000564846 OR4F5Q8NH21 305 aa15.32■□□□□ 0.04
CLN6-205ENST00000564846 OR4F4Q96R69 305 aa15.32■□□□□ 0.04
CLN6-205ENST00000564846 OR7C2O60412 319 aa15.31■□□□□ 0.04
CLN6-205ENST00000564846 TOMM40O96008 361 aa15.31■□□□□ 0.04
CLN6-205ENST00000564846 YPEL3P61236 119 aaPredicted RBP15.31■□□□□ 0.04
CLN6-205ENST00000564846 Q56UQ5 140 aa15.31■□□□□ 0.04
CLN6-205ENST00000564846 FAM90A2PQ658T7 463 aa15.31■□□□□ 0.04
CLN6-205ENST00000564846 LINC00305Q7Z4B0 112 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms