RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 C4BPBP20851 252 aa17.35■□□□□ 0.37
NME3-206ENST00000564252 SURF2Q15527 256 aaPredicted RBP17.35■□□□□ 0.37
NME3-206ENST00000564252 PRSS54Q6PEW0 395 aa17.35■□□□□ 0.37
NME3-206ENST00000564252 MORN3Q6PF18 240 aaPredicted RBP17.35■□□□□ 0.37
NME3-206ENST00000564252 OR1S2Q8NGQ3 325 aa17.35■□□□□ 0.37
NME3-206ENST00000564252 CTDSP2O14595 271 aa17.34■□□□□ 0.37
NME3-206ENST00000564252 RBMY1A1P0DJD3 496 aaKnown RBP17.34■□□□□ 0.37
NME3-206ENST00000564252 RBMY1CP0DJD4 496 aa17.34■□□□□ 0.37
NME3-206ENST00000564252 SPP1P10451 314 aa17.34■□□□□ 0.37
NME3-206ENST00000564252 RND2P52198 227 aa17.34■□□□□ 0.37
NME3-206ENST00000564252 DHODHQ02127 395 aa17.34■□□□□ 0.37
NME3-206ENST00000564252 RBMY1FQ15415 496 aaKnown RBP17.34■□□□□ 0.37
NME3-206ENST00000564252 TMEM41BQ5BJD5 291 aa17.34■□□□□ 0.37
NME3-206ENST00000564252 RNASEH2CQ8TDP1 164 aaKnown RBP17.34■□□□□ 0.37
NME3-206ENST00000564252 TMEM170AQ8WVE7 144 aa17.34■□□□□ 0.37
NME3-206ENST00000564252 SMIM4Q8WVI0 70 aa17.34■□□□□ 0.37
NME3-206ENST00000564252 HRH4Q9H3N8 390 aa17.34■□□□□ 0.37
NME3-206ENST00000564252 GPR132Q9UNW8 380 aa17.34■□□□□ 0.37
NME3-206ENST00000564252 IGHV4-28A0A0C4DH34 117 aa17.33■□□□□ 0.36
NME3-206ENST00000564252 CRYM-AS1A6NIL9 109 aa17.33■□□□□ 0.36
NME3-206ENST00000564252 DISC1C4P0D8 188 aa17.33■□□□□ 0.36
NME3-206ENST00000564252 RGS5O15539 181 aa17.33■□□□□ 0.36
NME3-206ENST00000564252 SLC25A4P12235 298 aa17.33■□□□□ 0.36
NME3-206ENST00000564252 OR10J1P30954 320 aa17.33■□□□□ 0.36
NME3-206ENST00000564252 TMEM268Q5VZI3 342 aa17.33■□□□□ 0.36
NME3-206ENST00000564252 C16orf54Q6UWD8 224 aa17.33■□□□□ 0.36
NME3-206ENST00000564252 SLC24A4Q8NFF2 622 aa17.33■□□□□ 0.36
NME3-206ENST00000564252 OR4C16Q8NGL9 310 aa17.33■□□□□ 0.36
NME3-206ENST00000564252 GLMPQ8WWB7 406 aa17.33■□□□□ 0.36
NME3-206ENST00000564252 ZNF705EA8MWA4 302 aaPredicted RBP17.32■□□□□ 0.36
NME3-206ENST00000564252 HNRNPCP07910 306 aaKnown RBP eCLIP17.32■□□□□ 0.36
NME3-206ENST00000564252 TCTAP57738 103 aa17.32■□□□□ 0.36
NME3-206ENST00000564252 YPEL3P61236 119 aaPredicted RBP17.32■□□□□ 0.36
NME3-206ENST00000564252 Q8WTZ3 238 aa17.32■□□□□ 0.36
NME3-206ENST00000564252 TMEM56-RWDD3S4R434 201 aa17.32■□□□□ 0.36
NME3-206ENST00000564252 HELTA6NFD8 242 aa17.31■□□□□ 0.36
NME3-206ENST00000564252 CEBPZOSA8MTT3 80 aa17.31■□□□□ 0.36
NME3-206ENST00000564252 AKAIN1P0CW23 69 aa17.31■□□□□ 0.36
NME3-206ENST00000564252 MIFP14174 115 aa17.31■□□□□ 0.36
NME3-206ENST00000564252 EIF2B2P49770 351 aaKnown RBP17.31■□□□□ 0.36
NME3-206ENST00000564252 PRR20EP86478 221 aa17.31■□□□□ 0.36
NME3-206ENST00000564252 PRR20CP86479 221 aa17.31■□□□□ 0.36
NME3-206ENST00000564252 PRR20DP86480 221 aa17.31■□□□□ 0.36
NME3-206ENST00000564252 PRR20BP86481 221 aa17.31■□□□□ 0.36
NME3-206ENST00000564252 PRR20AP86496 221 aa17.31■□□□□ 0.36
NME3-206ENST00000564252 DHRS2Q13268 280 aa17.31■□□□□ 0.36
NME3-206ENST00000564252 SPCS2Q15005 226 aa17.31■□□□□ 0.36
NME3-206ENST00000564252 ACTL10Q5JWF8 245 aa17.31■□□□□ 0.36
NME3-206ENST00000564252 X6R8D5 127 aa17.31■□□□□ 0.36
NME3-206ENST00000564252 C11orf94C9JXX5 98 aa17.3■□□□□ 0.36
NME3-206ENST00000564252 USF2Q15853 346 aaPredicted RBP17.3■□□□□ 0.36
NME3-206ENST00000564252 CSNK1G2-AS1Q8NCQ2 148 aa17.3■□□□□ 0.36
NME3-206ENST00000564252 APLNQ9ULZ1 77 aa17.3■□□□□ 0.36
NME3-206ENST00000564252 IGLL5B9A064 214 aa17.29■□□□□ 0.36
NME3-206ENST00000564252 CTDSPLO15194 276 aa17.29■□□□□ 0.36
NME3-206ENST00000564252 NXPH3O95157 252 aa17.29■□□□□ 0.36
NME3-206ENST00000564252 NPY1RP25929 384 aa17.29■□□□□ 0.36
NME3-206ENST00000564252 ALDH3B2P48448 385 aa17.29■□□□□ 0.36
NME3-206ENST00000564252 PSMG4Q5JS54 123 aa17.29■□□□□ 0.36
NME3-206ENST00000564252 OR51S1Q8NGJ8 323 aa17.29■□□□□ 0.36
NME3-206ENST00000564252 RAB40CQ96S21 281 aa17.29■□□□□ 0.36
NME3-206ENST00000564252 IL4P05112 153 aa17.28■□□□□ 0.36
NME3-206ENST00000564252 AP2S1P53680 142 aaPredicted RBP17.28■□□□□ 0.36
NME3-206ENST00000564252 NMSQ5H8A3 153 aa17.28■□□□□ 0.36
NME3-206ENST00000564252 ETFRF1Q6IPR1 90 aa17.28■□□□□ 0.36
NME3-206ENST00000564252 GPR141Q7Z602 305 aa17.28■□□□□ 0.36
NME3-206ENST00000564252 NPIPB3Q92617 1050 aa17.28■□□□□ 0.36
NME3-206ENST00000564252 PRRT1Q99946 306 aa17.28■□□□□ 0.36
NME3-206ENST00000564252 MRPS26Q9BYN8 205 aaKnown RBP17.28■□□□□ 0.36
NME3-206ENST00000564252 CLEC5AQ9NY25 188 aa17.28■□□□□ 0.36
NME3-206ENST00000564252 HERC2O95714 4834 aa17.27■□□□□ 0.36
NME3-206ENST00000564252 ELOA3CA0A087WX78 387 aaPredicted RBP17.27■□□□□ 0.36
NME3-206ENST00000564252 SULT1A3P0DMM9 295 aa17.27■□□□□ 0.36
NME3-206ENST00000564252 SULT1A4P0DMN0 295 aa17.27■□□□□ 0.36
NME3-206ENST00000564252 HLA-DMBP28068 263 aa17.27■□□□□ 0.36
NME3-206ENST00000564252 IL18Q14116 193 aa17.27■□□□□ 0.36
NME3-206ENST00000564252 IL22RA2Q969J5 263 aa17.27■□□□□ 0.36
NME3-206ENST00000564252 DIRAS2Q96HU8 199 aa17.27■□□□□ 0.36
NME3-206ENST00000564252 PRR13Q9NZ81 148 aa17.27■□□□□ 0.36
NME3-206ENST00000564252 TBC1D24Q9ULP9 559 aa17.27■□□□□ 0.36
NME3-206ENST00000564252 FAM90A26D6RGX4 464 aa17.26■□□□□ 0.35
NME3-206ENST00000564252 TOMM40O96008 361 aa17.26■□□□□ 0.35
NME3-206ENST00000564252 Q6ZTC4 211 aa17.26■□□□□ 0.35
NME3-206ENST00000564252 NOXA1Q86UR1 476 aa17.26■□□□□ 0.35
NME3-206ENST00000564252 CLVS1Q8IUQ0 354 aaPredicted RBP17.26■□□□□ 0.35
NME3-206ENST00000564252 ACY3Q96HD9 319 aa17.26■□□□□ 0.35
NME3-206ENST00000564252 RABL2AQ9UBK7 228 aaPredicted RBP17.26■□□□□ 0.35
NME3-206ENST00000564252 CACFD1Q9UGQ2 172 aa17.26■□□□□ 0.35
NME3-206ENST00000564252 RABL2BQ9UNT1 228 aa17.26■□□□□ 0.35
NME3-206ENST00000564252 ANKRD20A5PA0PJZ0 165 aa17.25■□□□□ 0.35
NME3-206ENST00000564252 BUB3O43684 328 aa17.25■□□□□ 0.35
NME3-206ENST00000564252 RD3LP0DJH9 198 aa17.25■□□□□ 0.35
NME3-206ENST00000564252 NRN1Q9NPD7 142 aa17.25■□□□□ 0.35
NME3-206ENST00000564252 SIGLEC15Q6ZMC9 328 aa17.24■□□□□ 0.35
NME3-206ENST00000564252 SEPSECSQ9HD40 501 aaKnown RBP17.24■□□□□ 0.35
NME3-206ENST00000564252 CCDC59Q9P031 241 aaKnown RBP17.24■□□□□ 0.35
NME3-206ENST00000564252 HSPB7Q9UBY9 170 aa17.24■□□□□ 0.35
NME3-206ENST00000564252 KCNIP3Q9Y2W7 256 aa17.24■□□□□ 0.35
NME3-206ENST00000564252 DNAH2Q9P225 4427 aa17.24■□□□□ 0.35
NME3-206ENST00000564252 FAT2Q9NYQ8 4349 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms