RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 OPCMLQ14982 345 aa13.14□□□□□ -0.31
CMTM3-208ENST00000564247 VWC2Q2TAL6 325 aa13.14□□□□□ -0.31
CMTM3-208ENST00000564247 TEPPQ6URK8 271 aa13.14□□□□□ -0.31
CMTM3-208ENST00000564247 WIPF2Q8TF74 440 aaPredicted RBP13.14□□□□□ -0.31
CMTM3-208ENST00000564247 UBE2E2Q96LR5 201 aa13.14□□□□□ -0.31
CMTM3-208ENST00000564247 ATP6V0BQ99437 205 aa13.14□□□□□ -0.31
CMTM3-208ENST00000564247 WFDC1Q9HC57 220 aa13.14□□□□□ -0.31
CMTM3-208ENST00000564247 S4R3C0 116 aa13.14□□□□□ -0.31
CMTM3-208ENST00000564247 UBE2L5PA0A1B0GUS4 154 aa13.13□□□□□ -0.31
CMTM3-208ENST00000564247 ZFP92A6NM28 416 aa13.13□□□□□ -0.31
CMTM3-208ENST00000564247 CLN5O75503 358 aa13.13□□□□□ -0.31
CMTM3-208ENST00000564247 IGHV3-11P01762 117 aa13.13□□□□□ -0.31
CMTM3-208ENST00000564247 IGHV3-23P01764 117 aa13.13□□□□□ -0.31
CMTM3-208ENST00000564247 KHDC1LQ5JSQ8 128 aa13.13□□□□□ -0.31
CMTM3-208ENST00000564247 LAMTOR1Q6IAA8 161 aa13.13□□□□□ -0.31
CMTM3-208ENST00000564247 ZNF502Q8TBZ5 544 aa13.13□□□□□ -0.31
CMTM3-208ENST00000564247 ZNF471Q9BX82 626 aaPredicted RBP13.13□□□□□ -0.31
CMTM3-208ENST00000564247 MPDU1O75352 247 aa13.12□□□□□ -0.31
CMTM3-208ENST00000564247 CLEC3BP05452 202 aa13.12□□□□□ -0.31
CMTM3-208ENST00000564247 FABP1P07148 127 aa13.12□□□□□ -0.31
CMTM3-208ENST00000564247 CD28P10747 220 aa13.12□□□□□ -0.31
CMTM3-208ENST00000564247 CDX1P47902 265 aaPredicted RBP13.12□□□□□ -0.31
CMTM3-208ENST00000564247 KIAA0141Q14154 515 aaPredicted RBP13.12□□□□□ -0.31
CMTM3-208ENST00000564247 ZNF343Q6P1L6 599 aa13.12□□□□□ -0.31
CMTM3-208ENST00000564247 BTNL8Q6UX41 500 aa13.12□□□□□ -0.31
CMTM3-208ENST00000564247 CLEC19AQ6UXS0 136 aa13.12□□□□□ -0.31
CMTM3-208ENST00000564247 ZNF709Q8N972 641 aa13.12□□□□□ -0.31
CMTM3-208ENST00000564247 MYOZ3Q8TDC0 251 aa13.12□□□□□ -0.31
CMTM3-208ENST00000564247 WDR83OSQ9Y284 106 aa13.12□□□□□ -0.31
CMTM3-208ENST00000564247 NUPL2O15504 423 aaKnown RBP13.11□□□□□ -0.31
CMTM3-208ENST00000564247 FGF7P21781 194 aa13.11□□□□□ -0.31
CMTM3-208ENST00000564247 OR10J1P30954 320 aa13.11□□□□□ -0.31
CMTM3-208ENST00000564247 TCTEX1D4Q5JR98 221 aa13.11□□□□□ -0.31
CMTM3-208ENST00000564247 RPL7L1Q6DKI1 246 aaKnown RBP13.11□□□□□ -0.31
CMTM3-208ENST00000564247 C11orf44Q8N8P7 122 aa13.11□□□□□ -0.31
CMTM3-208ENST00000564247 THAP8Q8NA92 274 aa13.11□□□□□ -0.31
CMTM3-208ENST00000564247 PARD6GQ9BYG4 376 aaPredicted RBP13.11□□□□□ -0.31
CMTM3-208ENST00000564247 WDR61Q9GZS3 305 aaKnown RBP13.11□□□□□ -0.31
CMTM3-208ENST00000564247 CYTL1Q9NRR1 136 aa13.11□□□□□ -0.31
CMTM3-208ENST00000564247 MRPL36Q9P0J6 103 aaKnown RBP13.11□□□□□ -0.31
CMTM3-208ENST00000564247 PEF1Q9UBV8 284 aaKnown RBP13.11□□□□□ -0.31
CMTM3-208ENST00000564247 TSSC4Q9Y5U2 329 aaPredicted RBP13.11□□□□□ -0.31
CMTM3-208ENST00000564247 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.1□□□□□ -0.31
CMTM3-208ENST00000564247 OR2T8A6NH00 312 aa13.1□□□□□ -0.31
CMTM3-208ENST00000564247 C17orf112F2Z3M2 114 aa13.1□□□□□ -0.31
CMTM3-208ENST00000564247 TSPAN15O95858 294 aa13.1□□□□□ -0.31
CMTM3-208ENST00000564247 GPR183P32249 361 aa13.1□□□□□ -0.31
CMTM3-208ENST00000564247 SPSB3Q6PJ21 355 aa13.1□□□□□ -0.31
CMTM3-208ENST00000564247 SLC51BQ86UW2 128 aa13.1□□□□□ -0.31
CMTM3-208ENST00000564247 OR5B12Q96R08 314 aa13.1□□□□□ -0.31
CMTM3-208ENST00000564247 TRGV9Q99603 122 aa13.1□□□□□ -0.31
CMTM3-208ENST00000564247 ANKRD34BA5PLL1 514 aa13.09□□□□□ -0.31
CMTM3-208ENST00000564247 NUDT19A8MXV4 375 aa13.09□□□□□ -0.31
CMTM3-208ENST00000564247 LGALS1P09382 135 aaKnown RBP13.09□□□□□ -0.31
CMTM3-208ENST00000564247 TPT1P13693 172 aaKnown RBP13.09□□□□□ -0.31
CMTM3-208ENST00000564247 ARL3P36405 182 aa13.09□□□□□ -0.31
CMTM3-208ENST00000564247 CAMLGP49069 296 aa13.09□□□□□ -0.31
CMTM3-208ENST00000564247 SELENOTP62341 195 aa13.09□□□□□ -0.31
CMTM3-208ENST00000564247 GNPNAT1Q96EK6 184 aaPredicted RBP13.09□□□□□ -0.31
CMTM3-208ENST00000564247 CCDC140Q96MF4 163 aa13.09□□□□□ -0.31
CMTM3-208ENST00000564247 GNB4Q9HAV0 340 aa13.09□□□□□ -0.31
CMTM3-208ENST00000564247 BOLA1Q9Y3E2 137 aa13.09□□□□□ -0.31
CMTM3-208ENST00000564247 LSM4Q9Y4Z0 139 aaKnown RBP13.09□□□□□ -0.31
CMTM3-208ENST00000564247 AGPAT2O15120 278 aa13.08□□□□□ -0.32
CMTM3-208ENST00000564247 TGOLN2O43493 480 aa13.08□□□□□ -0.32
CMTM3-208ENST00000564247 CTSGP08311 255 aa13.08□□□□□ -0.32
CMTM3-208ENST00000564247 IGLC1P0CG04 106 aa13.08□□□□□ -0.32
CMTM3-208ENST00000564247 TIGITQ495A1 244 aa13.08□□□□□ -0.32
CMTM3-208ENST00000564247 HIST2H2BDQ6DRA6 164 aa13.08□□□□□ -0.32
CMTM3-208ENST00000564247 HSD17B11Q8NBQ5 300 aa13.08□□□□□ -0.32
CMTM3-208ENST00000564247 Q8WTZ3 238 aa13.08□□□□□ -0.32
CMTM3-208ENST00000564247 C4orf3Q8WVX3 66 aa13.08□□□□□ -0.32
CMTM3-208ENST00000564247 CITED2Q99967 270 aaPredicted RBP13.08□□□□□ -0.32
CMTM3-208ENST00000564247 KCNIP2Q9NS61 270 aa13.08□□□□□ -0.32
CMTM3-208ENST00000564247 IGKV1OR2-108A0A075B7D4 117 aa13.07□□□□□ -0.32
CMTM3-208ENST00000564247 F8W735 103 aaPredicted RBP13.07□□□□□ -0.32
CMTM3-208ENST00000564247 GGCTO75223 188 aaKnown RBP13.07□□□□□ -0.32
CMTM3-208ENST00000564247 HSPB1P04792 205 aaKnown RBP13.07□□□□□ -0.32
CMTM3-208ENST00000564247 YPEL3P61236 119 aaPredicted RBP13.07□□□□□ -0.32
CMTM3-208ENST00000564247 RUNX1Q01196 453 aa13.07□□□□□ -0.32
CMTM3-208ENST00000564247 RELQ04864 619 aaPredicted RBP13.07□□□□□ -0.32
CMTM3-208ENST00000564247 CYP2G1PQ6ZSU1 146 aa13.07□□□□□ -0.32
CMTM3-208ENST00000564247 BAP18Q8IXM2 172 aa13.07□□□□□ -0.32
CMTM3-208ENST00000564247 KLHL30-AS1Q8NEE0 82 aa13.07□□□□□ -0.32
CMTM3-208ENST00000564247 DPF1Q92782 380 aa13.07□□□□□ -0.32
CMTM3-208ENST00000564247 MGST2Q99735 147 aa13.07□□□□□ -0.32
CMTM3-208ENST00000564247 GINS3Q9BRX5 216 aa13.07□□□□□ -0.32
CMTM3-208ENST00000564247 NPCDR1Q9BY65 106 aa13.07□□□□□ -0.32
CMTM3-208ENST00000564247 NOTCH1P46531 2555 aa13.06□□□□□ -0.32
CMTM3-208ENST00000564247 IGKV1D-37A0A075B6S9 117 aa13.06□□□□□ -0.32
CMTM3-208ENST00000564247 CFDP00746 253 aaPredicted RBP13.06□□□□□ -0.32
CMTM3-208ENST00000564247 RD3LP0DJH9 198 aa13.06□□□□□ -0.32
CMTM3-208ENST00000564247 ZNF616Q08AN1 781 aa13.06□□□□□ -0.32
CMTM3-208ENST00000564247 EIF5AL1Q6IS14 154 aaKnown RBP13.06□□□□□ -0.32
CMTM3-208ENST00000564247 NDUFA11Q86Y39 141 aa13.06□□□□□ -0.32
CMTM3-208ENST00000564247 BPIFCQ8NFQ6 507 aa13.06□□□□□ -0.32
CMTM3-208ENST00000564247 STOML3Q8TAV4 291 aa13.06□□□□□ -0.32
CMTM3-208ENST00000564247 CHRDL1Q9BU40 450 aa13.06□□□□□ -0.32
CMTM3-208ENST00000564247 ARV1Q9H2C2 271 aa13.06□□□□□ -0.32
CMTM3-208ENST00000564247 SLC45A2Q9UMX9 530 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms