RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 NPY1RP25929 384 aa13.01□□□□□ -0.33
NME3-205ENST00000563854 P2RY1P47900 373 aa13.01□□□□□ -0.33
NME3-205ENST00000563854 C2orf83Q53S99 150 aa13.01□□□□□ -0.33
NME3-205ENST00000563854 ACY3Q96HD9 319 aa13.01□□□□□ -0.33
NME3-205ENST00000563854 DNAH1Q9P2D7 4330 aa13.01□□□□□ -0.33
NME3-205ENST00000563854 NUPR2A6NF83 97 aa13□□□□□ -0.33
NME3-205ENST00000563854 IFNA10P01566 189 aa13□□□□□ -0.33
NME3-205ENST00000563854 SLC25A4P12235 298 aa13□□□□□ -0.33
NME3-205ENST00000563854 OR10J1P30954 320 aa13□□□□□ -0.33
NME3-205ENST00000563854 PYDC2Q56P42 97 aa13□□□□□ -0.33
NME3-205ENST00000563854 PRSS54Q6PEW0 395 aa13□□□□□ -0.33
NME3-205ENST00000563854 TMED4Q7Z7H5 227 aa13□□□□□ -0.33
NME3-205ENST00000563854 TMEM217Q8N7C4 229 aa13□□□□□ -0.33
NME3-205ENST00000563854 OR1S2Q8NGQ3 325 aa13□□□□□ -0.33
NME3-205ENST00000563854 RNASEH2CQ8TDP1 164 aaKnown RBP13□□□□□ -0.33
NME3-205ENST00000563854 IL22RA2Q969J5 263 aa13□□□□□ -0.33
NME3-205ENST00000563854 IGLC1P0CG04 106 aa12.99□□□□□ -0.33
NME3-205ENST00000563854 ANXA3P12429 323 aa12.99□□□□□ -0.33
NME3-205ENST00000563854 CRYBB3P26998 211 aa12.99□□□□□ -0.33
NME3-205ENST00000563854 FAUP35544 74 aaKnown RBP12.99□□□□□ -0.33
NME3-205ENST00000563854 SMCO1Q147U7 214 aa12.99□□□□□ -0.33
NME3-205ENST00000563854 RBMS2Q15434 407 aaKnown RBP12.99□□□□□ -0.33
NME3-205ENST00000563854 LYZL2Q7Z4W2 148 aa12.99□□□□□ -0.33
NME3-205ENST00000563854 STHQ8IWL8 128 aa12.99□□□□□ -0.33
NME3-205ENST00000563854 Q8WTZ3 238 aa12.99□□□□□ -0.33
NME3-205ENST00000563854 TMEM170AQ8WVE7 144 aa12.99□□□□□ -0.33
NME3-205ENST00000563854 GRAMD2BQ96HH9 432 aa12.99□□□□□ -0.33
NME3-205ENST00000563854 RARRES2Q99969 163 aa12.99□□□□□ -0.33
NME3-205ENST00000563854 HYDINQ4G0P3 5121 aa12.98□□□□□ -0.33
NME3-205ENST00000563854 EPPK1P58107 5090 aaKnown RBP12.98□□□□□ -0.33
NME3-205ENST00000563854 TRAV2A0A0B4J234 112 aa12.98□□□□□ -0.33
NME3-205ENST00000563854 ZNF688P0C7X2 276 aa12.98□□□□□ -0.33
NME3-205ENST00000563854 CCR6P51684 374 aa12.98□□□□□ -0.33
NME3-205ENST00000563854 SUPT4H1P63272 117 aaKnown RBP12.98□□□□□ -0.33
NME3-205ENST00000563854 ETFRF1Q6IPR1 90 aa12.98□□□□□ -0.33
NME3-205ENST00000563854 LGI3Q8N145 548 aa12.98□□□□□ -0.33
NME3-205ENST00000563854 OR11H2Q8NH07 326 aa12.98□□□□□ -0.33
NME3-205ENST00000563854 DTD1Q8TEA8 209 aa12.98□□□□□ -0.33
NME3-205ENST00000563854 GATAD1Q8WUU5 269 aa12.98□□□□□ -0.33
NME3-205ENST00000563854 NPIPB3Q92617 1050 aa12.98□□□□□ -0.33
NME3-205ENST00000563854 SOSTQ9BQB4 213 aa12.98□□□□□ -0.33
NME3-205ENST00000563854 RBKSQ9H477 322 aa12.98□□□□□ -0.33
NME3-205ENST00000563854 ALMS1Q8TCU4 4167 aa12.98□□□□□ -0.33
NME3-205ENST00000563854 A0A0B4J2A0 478 aa12.97□□□□□ -0.33
NME3-205ENST00000563854 LY6G6CO95867 125 aa12.97□□□□□ -0.33
NME3-205ENST00000563854 IL4P05112 153 aa12.97□□□□□ -0.33
NME3-205ENST00000563854 HNRNPCP07910 306 aaKnown RBP eCLIP12.97□□□□□ -0.33
NME3-205ENST00000563854 SRPXP78539 464 aa12.97□□□□□ -0.33
NME3-205ENST00000563854 NMSQ5H8A3 153 aa12.97□□□□□ -0.33
NME3-205ENST00000563854 CEMP1Q6PRD7 247 aaPredicted RBP12.97□□□□□ -0.33
NME3-205ENST00000563854 NOXA1Q86UR1 476 aa12.97□□□□□ -0.33
NME3-205ENST00000563854 TOMM5Q8N4H5 51 aa12.97□□□□□ -0.33
NME3-205ENST00000563854 OR1S1Q8NH92 325 aa12.97□□□□□ -0.33
NME3-205ENST00000563854 CACFD1Q9UGQ2 172 aa12.97□□□□□ -0.33
NME3-205ENST00000563854 SHPKQ9UHJ6 478 aa12.97□□□□□ -0.33
NME3-205ENST00000563854 PLECQ15149 4684 aaKnown RBP12.96□□□□□ -0.33
NME3-205ENST00000563854 KNCNA6PVL3 124 aa12.96□□□□□ -0.33
NME3-205ENST00000563854 K7EQG2 157 aa12.96□□□□□ -0.33
NME3-205ENST00000563854 IFNA4P05014 189 aa12.96□□□□□ -0.33
NME3-205ENST00000563854 VAMP1P23763 118 aa12.96□□□□□ -0.33
NME3-205ENST00000563854 EIF2B2P49770 351 aaKnown RBP12.96□□□□□ -0.33
NME3-205ENST00000563854 AP3S2P59780 193 aa12.96□□□□□ -0.33
NME3-205ENST00000563854 KLF9Q13886 244 aaPredicted RBP12.96□□□□□ -0.33
NME3-205ENST00000563854 LINC00476Q8WZB0 136 aa12.96□□□□□ -0.33
NME3-205ENST00000563854 TRIM63Q969Q1 353 aa12.96□□□□□ -0.33
NME3-205ENST00000563854 HSPB7Q9UBY9 170 aa12.96□□□□□ -0.33
NME3-205ENST00000563854 DEFB4AO15263 64 aa12.95□□□□□ -0.34
NME3-205ENST00000563854 S100A5P33763 92 aa12.95□□□□□ -0.34
NME3-205ENST00000563854 YPEL3P61236 119 aaPredicted RBP12.95□□□□□ -0.34
NME3-205ENST00000563854 DHRS2Q13268 280 aa12.95□□□□□ -0.34
NME3-205ENST00000563854 USF2Q15853 346 aaPredicted RBP12.95□□□□□ -0.34
NME3-205ENST00000563854 KLK5Q9Y337 293 aaPredicted RBP12.95□□□□□ -0.34
NME3-205ENST00000563854 V9GYH0 126 aa12.95□□□□□ -0.34
NME3-205ENST00000563854 HELTA6NFD8 242 aa12.94□□□□□ -0.34
NME3-205ENST00000563854 RD3LP0DJH9 198 aa12.94□□□□□ -0.34
NME3-205ENST00000563854 PBDC1Q9BVG4 233 aa12.94□□□□□ -0.34
NME3-205ENST00000563854 FBXL17Q9UF56 701 aa12.94□□□□□ -0.34
NME3-205ENST00000563854 PAIP2BQ9ULR5 123 aaKnown RBP12.94□□□□□ -0.34
NME3-205ENST00000563854 U3KQ87 197 aa12.94□□□□□ -0.34
NME3-205ENST00000563854 BIRC6Q9NR09 4857 aa12.93□□□□□ -0.34
NME3-205ENST00000563854 TOMM40O96008 361 aa12.93□□□□□ -0.34
NME3-205ENST00000563854 IAPPP10997 89 aa12.93□□□□□ -0.34
NME3-205ENST00000563854 ATF4P18848 351 aaPredicted RBP12.93□□□□□ -0.34
NME3-205ENST00000563854 NANOS2P60321 138 aaKnown RBP12.93□□□□□ -0.34
NME3-205ENST00000563854 PSMG4Q5JS54 123 aa12.93□□□□□ -0.34
NME3-205ENST00000563854 ACTL10Q5JWF8 245 aa12.93□□□□□ -0.34
NME3-205ENST00000563854 C16orf54Q6UWD8 224 aa12.93□□□□□ -0.34
NME3-205ENST00000563854 OR51G1Q8NGK1 321 aa12.93□□□□□ -0.34
NME3-205ENST00000563854 DCANP1Q8TF63 244 aa12.93□□□□□ -0.34
NME3-205ENST00000563854 PHLDA1Q8WV24 401 aaPredicted RBP12.93□□□□□ -0.34
NME3-205ENST00000563854 GLMPQ8WWB7 406 aa12.93□□□□□ -0.34
NME3-205ENST00000563854 U3KQE9 123 aa12.93□□□□□ -0.34
NME3-205ENST00000563854 ZFP92A6NM28 416 aa12.92□□□□□ -0.34
NME3-205ENST00000563854 PSG1P11464 419 aa12.92□□□□□ -0.34
NME3-205ENST00000563854 ZNF79Q15937 498 aa12.92□□□□□ -0.34
NME3-205ENST00000563854 TMEM128Q5BJH2 165 aa12.92□□□□□ -0.34
NME3-205ENST00000563854 TRPT1Q86TN4 253 aaKnown RBP12.92□□□□□ -0.34
NME3-205ENST00000563854 C11orf45Q8TAV5 145 aa12.92□□□□□ -0.34
NME3-205ENST00000563854 SLC35E1Q96K37 410 aa12.92□□□□□ -0.34
NME3-205ENST00000563854 PIGBOS1A0A0B4J2F0 54 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms