RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 THBDP07204 575 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 NPC2P61916 151 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 CSRP2Q16527 193 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 TDRG1Q3Y452 100 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 RNF208Q9H0X6 261 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 CCL26Q9Y258 94 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 FANCMQ8IYD8 2048 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 IGHV3-43A0A0B4J1X8 118 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 PRSS29PA6NIE9 313 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 NPIPB5A8MRT5 1133 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 IGHV3-43DP0DP04 118 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 TNFRSF1AP19438 455 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 IFI27L2Q9H2X8 130 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 DLL3Q9NYJ7 618 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 IDI2-AS1Q9NZ38 188 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 LRRK1Q38SD2 2015 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 A0A096LPE4 126 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 A0A1W2PPZ6 126 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 NRN1LQ496H8 165 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 PHLDA3Q9Y5J5 127 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 MYMXA0A1B0GTQ4 84 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 LGALS7P47929 136 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 RFESDQ8TAC1 157 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 PRR32B1ATL7 298 aa5.21□□□□□ -1.57
CLK3-212ENST00000563418 HEATR1Q9H583 2144 aaKnown RBP5.21□□□□□ -1.57
CLK3-212ENST00000563418 SRD5A1P18405 259 aa5.21□□□□□ -1.57
CLK3-212ENST00000563418 MRPS21P82921 87 aaKnown RBP5.21□□□□□ -1.57
CLK3-212ENST00000563418 EGR4Q05215 589 aa5.21□□□□□ -1.57
CLK3-212ENST00000563418 ZC2HC1BQ5TFG8 222 aa5.21□□□□□ -1.57
CLK3-212ENST00000563418 GTSCR1Q86UQ5 136 aa5.21□□□□□ -1.57
CLK3-212ENST00000563418 TMEM219Q86XT9 240 aa5.21□□□□□ -1.57
CLK3-212ENST00000563418 WFDC12Q8WWY7 111 aa5.21□□□□□ -1.57
CLK3-212ENST00000563418 Q6ZVH6 145 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 Q9H3A6 140 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 D6R8Y8 96 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 NDUFB8O95169 186 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 TRBV6-6A0A0A6YYG2 114 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 C15orf61A6NNL5 157 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 ANKRD29Q8N6D5 301 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 LOXL2Q9Y4K0 774 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 LOC102723996A0A087X1L8 192 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 IGKV1-8A0A0C4DH67 115 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 RPL11P62913 178 aaKnown RBP5.21□□□□□ -1.58
CLK3-212ENST00000563418 CENPVQ7Z7K6 275 aaPredicted RBP5.21□□□□□ -1.58
CLK3-212ENST00000563418 LRRC75A-AS1Q8N1F1 130 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 RCHY1Q96PM5 261 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 PLXNB2O15031 1838 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 UQCRQO14949 82 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 EFEMP2O95967 443 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 GNG5P63218 68 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 C12orf74Q32Q52 190 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 Q6ZS92 163 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 PLEKHB2Q96CS7 222 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 PROCRQ9UNN8 238 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 IGLL5B9A064 214 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 FZR1Q9UM11 496 aa5.21□□□□□ -1.58
CLK3-212ENST00000563418 CTRLP40313 264 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 C1QL2Q7Z5L3 287 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 HAX1O00165 279 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 CNEP1R1Q8N9A8 125 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 RNF166Q96A37 237 aaPredicted RBP5.2□□□□□ -1.58
CLK3-212ENST00000563418 NABP1Q96AH0 204 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 SPATA31B1PQ5VZV4 182 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 FOXI3A8MTJ6 420 aaPredicted RBP5.2□□□□□ -1.58
CLK3-212ENST00000563418 MGST3O14880 152 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 CXCL13O43927 109 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 TMEM54Q969K7 222 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 SCRT1Q9BWW7 348 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 ELNP15502 786 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 GLRXP35754 106 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 IGLV3-21P80748 117 aaPredicted RBP5.2□□□□□ -1.58
CLK3-212ENST00000563418 SPACA3Q8IXA5 215 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 GTF3C1Q12789 2109 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 IGHV3-15A0A0B4J1V0 119 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 PRSS57Q6UWY2 283 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 ASCL5Q7RTU5 278 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 C12orf49Q9H741 205 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 HLA-DRB4P13762 266 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 C6orf15Q6UXA7 325 aaPredicted RBP5.2□□□□□ -1.58
CLK3-212ENST00000563418 HLA-DRB4X5D2U9 266 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 SFTA2Q6UW10 78 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 DUX5Q96PT3 197 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 ASCL2Q99929 193 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 PRO1854Q9UHT4 67 aa5.2□□□□□ -1.58
CLK3-212ENST00000563418 RBMY1BA6NDE4 496 aaKnown RBP5.19□□□□□ -1.58
CLK3-212ENST00000563418 RBMY1EA6NEQ0 496 aaKnown RBP5.19□□□□□ -1.58
CLK3-212ENST00000563418 RBMY1DP0C7P1 496 aaKnown RBP5.19□□□□□ -1.58
CLK3-212ENST00000563418 RBMY1A1P0DJD3 496 aaKnown RBP5.19□□□□□ -1.58
CLK3-212ENST00000563418 RBMY1CP0DJD4 496 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 CTGFP29279 349 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 TICRRQ7Z2Z1 1910 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 XIRP1Q702N8 1843 aaKnown RBP5.19□□□□□ -1.58
CLK3-212ENST00000563418 FAM159AQ6UWV7 190 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 OSR1Q8TAX0 266 aaPredicted RBP5.19□□□□□ -1.58
CLK3-212ENST00000563418 SARAFQ96BY9 339 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 ABHD12Q8N2K0 398 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 DNAJC30Q96LL9 226 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 SLC25A15Q9Y619 301 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 CFIP05156 583 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 IGHV3-9P01782 118 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms