RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 NPIPB3Q92617 1050 aa7.65□□□□□ -1.18
UBFD1-202ENST00000563366 TRGV9Q99603 122 aa7.65□□□□□ -1.18
UBFD1-202ENST00000563366 FAM103A1Q9BTL3 118 aaKnown RBP7.65□□□□□ -1.18
UBFD1-202ENST00000563366 MRPL32Q9BYC8 188 aaKnown RBP7.65□□□□□ -1.18
UBFD1-202ENST00000563366 FNDC4Q9H6D8 234 aaPredicted RBP7.65□□□□□ -1.18
UBFD1-202ENST00000563366 VSIRQ9H7M9 311 aa7.65□□□□□ -1.18
UBFD1-202ENST00000563366 SLC25A22Q9H936 323 aa7.65□□□□□ -1.18
UBFD1-202ENST00000563366 MANBALQ9NQG1 85 aa7.65□□□□□ -1.18
UBFD1-202ENST00000563366 GAR1Q9NY12 217 aaKnown RBP7.65□□□□□ -1.18
UBFD1-202ENST00000563366 RFNGQ9Y644 331 aa7.65□□□□□ -1.18
UBFD1-202ENST00000563366 POLQO75417 2590 aa7.65□□□□□ -1.19
UBFD1-202ENST00000563366 IGLV11-55A0A075B6I3 123 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 IGKV1OR2-108A0A075B7D4 117 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 RBFOX3A6NFN3 312 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 I3L2K1 104 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 ATP6V0E1O15342 81 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 CXorf1O96002 111 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 CD5P06127 495 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 APELAP0DMC3 54 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 MFAP2P55001 183 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 NDPQ00604 133 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 KLK9Q2XQG4 91 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 FBLN7Q53RD9 439 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 KHDC3LQ587J8 217 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 HIST2H2BCQ6DN03 193 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 SPSB3Q6PJ21 355 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 UNQ5815/PRO19632Q6UWF5 114 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 LCN15Q6UWW0 184 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 WFDC11Q8NEX6 87 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 BPIFCQ8NFQ6 507 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 OR2T6Q8NHC8 308 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 RAB24Q969Q5 203 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 TXN2Q99757 166 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 TXNDC17Q9BRA2 123 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 SEC11CQ9BY50 192 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 TNFRSF19Q9NS68 423 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 ZNF580Q9UK33 172 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 KLK9Q9UKQ9 250 aa7.64□□□□□ -1.19
UBFD1-202ENST00000563366 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.64□□□□□ -1.19
UBFD1-202ENST00000563366 CREBBPQ92793 2442 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 TMEM218A2RU14 115 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 H3BUA1 57 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 CLN5O75503 358 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 YIF1AO95070 293 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 IGHG2P01859 326 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 HSPB1P04792 205 aaKnown RBP7.63□□□□□ -1.19
UBFD1-202ENST00000563366 IGF1P05019 195 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 LINC00869P0C866 280 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 HNF1AP20823 631 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 MFAP4P55083 255 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 ZNF726P1Q15940 193 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 ASPHD1Q5U4P2 390 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 SLC35E3Q7Z769 313 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 TMEM219Q86XT9 240 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 CCDC28AQ8IWP9 274 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 SUN5Q8TC36 379 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 VN1R17PQ8TDU5 208 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 ATP6V0BQ99437 205 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 HSPB9Q9BQS6 159 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 RNF24Q9Y225 148 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 VPS13CQ709C8 3753 aa7.63□□□□□ -1.19
UBFD1-202ENST00000563366 CSMD2Q7Z408 3487 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 TRAV41A0A0B4J266 112 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 A0A1B0GV50 99 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 F8W036 122 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 K7EIM0 57 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 AP4M1O00189 453 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 COX7A2P2O60397 106 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 BRI3O95415 125 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 OR5G3P0C626 314 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 STAG3L2P0CL84 134 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 STAG3L3P0CL85 134 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 BCL2P10415 239 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 S100A7P31151 101 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 FCGR2BP31994 310 aaPredicted RBP7.62□□□□□ -1.19
UBFD1-202ENST00000563366 IER3P46695 156 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 ECSCRQ19T08 205 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 DEFB112Q30KQ8 113 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 ZNF506Q5JVG8 444 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 FAM78BQ5VT40 261 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 PQLC2Q6ZP29 291 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 SVBPQ8N300 66 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 NECAP1Q8NC96 275 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 STXBP6Q8NFX7 210 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 SLC35B3Q9H1N7 401 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 PRDM13Q9H4Q3 707 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 GNG13Q9P2W3 67 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 VAX2Q9UIW0 290 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 VPREB3Q9UKI3 123 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 FUT9Q9Y231 359 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 DMRT1Q9Y5R6 373 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 ARL2-SNX15V9GYD0 113 aa7.62□□□□□ -1.19
UBFD1-202ENST00000563366 UNC79Q9P2D8 2635 aa7.61□□□□□ -1.19
UBFD1-202ENST00000563366 IGKV1D-37A0A075B6S9 117 aa7.61□□□□□ -1.19
UBFD1-202ENST00000563366 LOC102723971A0A1B0GUV8 181 aa7.61□□□□□ -1.19
UBFD1-202ENST00000563366 FAM223BA6NKX1 122 aa7.61□□□□□ -1.19
UBFD1-202ENST00000563366 CD5LO43866 347 aa7.61□□□□□ -1.19
UBFD1-202ENST00000563366 GNG7O60262 68 aa7.61□□□□□ -1.19
UBFD1-202ENST00000563366 AMY1AP04745 511 aa7.61□□□□□ -1.19
UBFD1-202ENST00000563366 SFTA3P0C7M3 94 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms