RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 NUP35Q8NFH5 326 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 C18orf32Q8TCD1 76 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 C22orf15Q8WYQ4 148 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 TNFRSF14Q92956 283 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 BORCS7Q96B45 105 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 RCHY1Q96PM5 261 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 YLPM1P49750 1951 aaKnown RBP10.54□□□□□ -0.72
USB1-207ENST00000563149 A0A1W2PPI3 338 aa10.53□□□□□ -0.72
USB1-207ENST00000563149 CORTO00230 105 aa10.53□□□□□ -0.72
USB1-207ENST00000563149 PRRG2O14669 202 aa10.53□□□□□ -0.72
USB1-207ENST00000563149 PMCHP20382 165 aa10.53□□□□□ -0.72
USB1-207ENST00000563149 TMEM155Q4W5P6 130 aa10.53□□□□□ -0.72
USB1-207ENST00000563149 NIT1Q86X76 327 aa10.53□□□□□ -0.72
USB1-207ENST00000563149 TMEM190Q8WZ59 177 aa10.53□□□□□ -0.72
USB1-207ENST00000563149 FAM168AQ92567 244 aa10.53□□□□□ -0.72
USB1-207ENST00000563149 LINC00479Q96M42 142 aa10.53□□□□□ -0.72
USB1-207ENST00000563149 RBM14Q96PK6 669 aaKnown RBP10.53□□□□□ -0.72
USB1-207ENST00000563149 C7orf69Q9H7B7 122 aa10.53□□□□□ -0.72
USB1-207ENST00000563149 TNFRSF19Q9NS68 423 aa10.53□□□□□ -0.72
USB1-207ENST00000563149 A0A0G2JNJ9 132 aa10.52□□□□□ -0.72
USB1-207ENST00000563149 LOXP28300 417 aaPredicted RBP10.52□□□□□ -0.72
USB1-207ENST00000563149 MFAP2P55001 183 aa10.52□□□□□ -0.72
USB1-207ENST00000563149 PLP1P60201 277 aa10.52□□□□□ -0.72
USB1-207ENST00000563149 BSPH1Q075Z2 132 aa10.52□□□□□ -0.72
USB1-207ENST00000563149 GAGE1Q13065 139 aa10.52□□□□□ -0.72
USB1-207ENST00000563149 PMCHL1Q16048 86 aa10.52□□□□□ -0.72
USB1-207ENST00000563149 CT83Q5H943 113 aa10.52□□□□□ -0.72
USB1-207ENST00000563149 C10orf55Q5SWW7 151 aa10.52□□□□□ -0.72
USB1-207ENST00000563149 LYPD2Q6UXB3 125 aa10.52□□□□□ -0.72
USB1-207ENST00000563149 KLHDC1Q8N7A1 406 aa10.52□□□□□ -0.72
USB1-207ENST00000563149 GPR82Q96P67 336 aa10.52□□□□□ -0.72
USB1-207ENST00000563149 SSBP3Q9BWW4 388 aaPredicted RBP10.52□□□□□ -0.72
USB1-207ENST00000563149 JKAMPQ9P055 326 aa10.52□□□□□ -0.72
USB1-207ENST00000563149 Q9UFV3 132 aa10.52□□□□□ -0.72
USB1-207ENST00000563149 RNF114Q9Y508 228 aa10.52□□□□□ -0.72
USB1-207ENST00000563149 SOX21Q9Y651 276 aaPredicted RBP10.52□□□□□ -0.72
USB1-207ENST00000563149 SLC25A17O43808 307 aa10.52□□□□□ -0.73
USB1-207ENST00000563149 SLC25A5P05141 298 aaKnown RBP10.52□□□□□ -0.73
USB1-207ENST00000563149 THBDP07204 575 aa10.52□□□□□ -0.73
USB1-207ENST00000563149 C3orf79P0CE67 100 aa10.52□□□□□ -0.73
USB1-207ENST00000563149 SLAQ13239 276 aa10.52□□□□□ -0.73
USB1-207ENST00000563149 DIAPH2-AS1Q14236 149 aa10.52□□□□□ -0.73
USB1-207ENST00000563149 MRGPRG-AS1Q2M3A8 158 aa10.52□□□□□ -0.73
USB1-207ENST00000563149 SPATA45Q537H7 98 aa10.52□□□□□ -0.73
USB1-207ENST00000563149 SPACA3Q8IXA5 215 aa10.52□□□□□ -0.73
USB1-207ENST00000563149 NHLRC2Q8NBF2 726 aa10.52□□□□□ -0.73
USB1-207ENST00000563149 TMEM116Q8NCL8 245 aa10.52□□□□□ -0.73
USB1-207ENST00000563149 CCL17Q92583 94 aa10.52□□□□□ -0.73
USB1-207ENST00000563149 FMC1Q96HJ9 113 aa10.52□□□□□ -0.73
USB1-207ENST00000563149 ZNF492Q9P255 531 aa10.52□□□□□ -0.73
USB1-207ENST00000563149 UQCR10Q9UDW1 63 aa10.52□□□□□ -0.73
USB1-207ENST00000563149 TRAV34A0A0B4J273 112 aa10.51□□□□□ -0.73
USB1-207ENST00000563149 IGLC7A0M8Q6 106 aa10.51□□□□□ -0.73
USB1-207ENST00000563149 PGPA6NDG6 321 aa10.51□□□□□ -0.73
USB1-207ENST00000563149 CA1P00915 261 aaPredicted RBP10.51□□□□□ -0.73
USB1-207ENST00000563149 CRYGBP07316 175 aa10.51□□□□□ -0.73
USB1-207ENST00000563149 NBEAP1P0C6P0 100 aa10.51□□□□□ -0.73
USB1-207ENST00000563149 IGHV1-8P0DP01 117 aa10.51□□□□□ -0.73
USB1-207ENST00000563149 RPL27AP46776 148 aaKnown RBP10.51□□□□□ -0.73
USB1-207ENST00000563149 RNASE6Q93091 150 aaKnown RBP10.51□□□□□ -0.73
USB1-207ENST00000563149 MLST8Q9BVC4 326 aa10.51□□□□□ -0.73
USB1-207ENST00000563149 MRPL36Q9P0J6 103 aaKnown RBP10.51□□□□□ -0.73
USB1-207ENST00000563149 CTSZQ9UBR2 303 aa10.51□□□□□ -0.73
USB1-207ENST00000563149 A0A1B0GXF2 115 aa10.5□□□□□ -0.73
USB1-207ENST00000563149 C22orf46C9J442 243 aa10.5□□□□□ -0.73
USB1-207ENST00000563149 HYPMO75409 117 aa10.5□□□□□ -0.73
USB1-207ENST00000563149 TOMM40O96008 361 aa10.5□□□□□ -0.73
USB1-207ENST00000563149 ZNF25P17030 456 aaPredicted RBP10.5□□□□□ -0.73
USB1-207ENST00000563149 C5orf17Q8NAS9 161 aa10.5□□□□□ -0.73
USB1-207ENST00000563149 ALKBH7Q9BT30 221 aaPredicted RBP10.5□□□□□ -0.73
USB1-207ENST00000563149 TMEM133Q9H2Q1 129 aa10.5□□□□□ -0.73
USB1-207ENST00000563149 NGBQ9NPG2 151 aa10.5□□□□□ -0.73
USB1-207ENST00000563149 URB1O60287 2271 aaKnown RBP10.5□□□□□ -0.73
USB1-207ENST00000563149 C20orf202A1L168 122 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 HIGD1CA8MV81 97 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 A8MWL6 223 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 K7EM74 188 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 DLEU1O43261 78 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 HSBP1O75506 76 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 ORM2P19652 201 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 OR1B1Q8NGR6 318 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 C8orf46Q8TAG6 207 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 PRSS22Q9GZN4 317 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 GFRA4Q9GZZ7 299 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 CELSR3Q9NYQ7 3312 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 NCOR1O75376 2440 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 FAM231BA6NCW3 169 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 ENSAO43768 121 aaKnown RBP10.49□□□□□ -0.73
USB1-207ENST00000563149 IGLC2P0DOY2 106 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 IGLC3P0DOY3 106 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 CASP6P55212 293 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 MMDQ15546 238 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 COL5A1-AS1Q5SY13 56 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 GDF5OSQ5U4N7 250 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 CYB5R2Q6BCY4 276 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 PRR27Q6MZM9 219 aa10.49□□□□□ -0.73
USB1-207ENST00000563149 RPP21Q9H633 154 aaKnown RBP10.49□□□□□ -0.73
USB1-207ENST00000563149 TNCP24821 2201 aa10.48□□□□□ -0.73
USB1-207ENST00000563149 MOSP00540 346 aa10.48□□□□□ -0.73
USB1-207ENST00000563149 LTAP01374 205 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms