RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 ACACBO00763 2458 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 DANCRP0C864 163 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 FER1L6-AS1Q8NA97 138 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 ARPC1AQ92747 370 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 PAXXQ9BUH6 204 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 IGSF23A1L1A6 192 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 CA2P00918 260 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 IL6RP08887 468 aaPredicted RBP6.22□□□□□ -1.41
TCF4-216ENST00000562680 C8orf88P0DMB2 117 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 HCP5Q6MZN7 132 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 RNF166Q96A37 237 aaPredicted RBP6.22□□□□□ -1.41
TCF4-216ENST00000562680 FBXL15Q9H469 300 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 HSPB1P04792 205 aaKnown RBP6.22□□□□□ -1.41
TCF4-216ENST00000562680 RPL7P18124 248 aaKnown RBP6.22□□□□□ -1.41
TCF4-216ENST00000562680 ATP5G2Q06055 141 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 HSD52Q0P140 79 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 LRRC75BQ2VPJ9 315 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 PPP1R27Q86WC6 154 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 LINC00311Q8N616 119 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 METTL26Q96S19 204 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 SPANXCQ9NY87 97 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 METRNQ9UJH8 293 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 ANKHD1Q8IWZ3 2542 aaKnown RBP6.22□□□□□ -1.41
TCF4-216ENST00000562680 TMEM189A5PLL7 270 aa6.21□□□□□ -1.41
TCF4-216ENST00000562680 ID1P41134 155 aa6.21□□□□□ -1.41
TCF4-216ENST00000562680 SUPT4H1P63272 117 aaKnown RBP6.21□□□□□ -1.41
TCF4-216ENST00000562680 RUNX1Q01196 453 aa6.21□□□□□ -1.41
TCF4-216ENST00000562680 SEM1Q6ZVN7 128 aa6.21□□□□□ -1.41
TCF4-216ENST00000562680 WDR86Q86TI4 376 aa6.21□□□□□ -1.41
TCF4-216ENST00000562680 TMEM167AQ8TBQ9 72 aa6.21□□□□□ -1.41
TCF4-216ENST00000562680 C20orf144Q9BQM9 153 aa6.21□□□□□ -1.41
TCF4-216ENST00000562680 FAM106AQ4KMX7 169 aa6.21□□□□□ -1.42
TCF4-216ENST00000562680 NMSQ5H8A3 153 aa6.21□□□□□ -1.42
TCF4-216ENST00000562680 ZNF343Q6P1L6 599 aa6.21□□□□□ -1.42
TCF4-216ENST00000562680 ZNF418Q8TF45 676 aaPredicted RBP6.21□□□□□ -1.42
TCF4-216ENST00000562680 NPFFR1Q9GZQ6 430 aa6.21□□□□□ -1.42
TCF4-216ENST00000562680 FOXA2Q9Y261 457 aaPredicted RBP6.21□□□□□ -1.42
TCF4-216ENST00000562680 RNF222A6NCQ9 220 aa6.21□□□□□ -1.42
TCF4-216ENST00000562680 DAZAP2Q15038 168 aaPredicted RBP6.21□□□□□ -1.42
TCF4-216ENST00000562680 SRSF8Q9BRL6 282 aaKnown RBP6.21□□□□□ -1.42
TCF4-216ENST00000562680 TRAV14DV4A0A0A6YYC5 116 aa6.21□□□□□ -1.42
TCF4-216ENST00000562680 SPINK8P0C7L1 97 aa6.21□□□□□ -1.42
TCF4-216ENST00000562680 GFI1BQ5VTD9 330 aa6.21□□□□□ -1.42
TCF4-216ENST00000562680 SP5Q6BEB4 398 aaPredicted RBP6.21□□□□□ -1.42
TCF4-216ENST00000562680 C10orf126Q8N4M7 172 aa6.21□□□□□ -1.42
TCF4-216ENST00000562680 OR51G1Q8NGK1 321 aa6.21□□□□□ -1.42
TCF4-216ENST00000562680 NEUROG1Q92886 237 aa6.21□□□□□ -1.42
TCF4-216ENST00000562680 IFITM10A6NMD0 228 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 NBEAP1P0C6P0 100 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 COL8A2P25067 703 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 LOXL3P58215 753 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 IZUMO4Q1ZYL8 232 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 LYPD6Q86Y78 171 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 VKORC1L1Q8N0U8 176 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 KIR3DL3Q8N743 410 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 ATG2AQ2TAZ0 1938 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 SHISA9B4DS77 424 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 TMEM262E9PQX1 116 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 ZNF415Q09FC8 603 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 C2orf68Q2NKX9 166 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 MRPL54Q6P161 138 aaKnown RBP6.2□□□□□ -1.42
TCF4-216ENST00000562680 SRSF12Q8WXF0 261 aaKnown RBP6.2□□□□□ -1.42
TCF4-216ENST00000562680 USF3Q68DE3 2245 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 OR11H12B2RN74 326 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 PAGE4O60829 102 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 ZNF253O75346 499 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 PLAUP00749 431 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 OR11H1Q8NG94 326 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 OR11H2Q8NH07 326 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 OR10AG1Q8NH19 301 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 RAX2Q96IS3 184 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.2□□□□□ -1.42
TCF4-216ENST00000562680 FCN1O00602 326 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 RRHO14718 337 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 TYMSP04818 313 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 MEF2BQ02080 365 aaPredicted RBP6.2□□□□□ -1.42
TCF4-216ENST00000562680 CD300EQ496F6 205 aaPredicted RBP6.2□□□□□ -1.42
TCF4-216ENST00000562680 MIC13Q5XKP0 118 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 CYP2G1PQ6ZSU1 146 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 C8orf31Q8N9H6 132 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 RABAC1Q9UI14 185 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 CACNA1AO00555 2505 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 TIMM23O14925 209 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 TMEM97Q5BJF2 176 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 VMO1Q7Z5L0 202 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 ZNF525Q8N782 197 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 NABP2Q9BQ15 211 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 RNF126Q9BV68 326 aa6.2□□□□□ -1.42
TCF4-216ENST00000562680 FOXI3A8MTJ6 420 aaPredicted RBP6.19□□□□□ -1.42
TCF4-216ENST00000562680 B5MCH6 92 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 PSG3Q16557 428 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 TMEM136Q6ZRR5 245 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 NPIPB3Q92617 1050 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 C21orf62Q9NYP8 219 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 IGHV2-70DA0A0C4DH43 119 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.19□□□□□ -1.42
TCF4-216ENST00000562680 MOB4Q9Y3A3 225 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 IGHV1-3A0A0C4DH29 117 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 MED19A0JLT2 244 aaPredicted RBP6.19□□□□□ -1.42
TCF4-216ENST00000562680 MSGN1A6NI15 193 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms