RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 RPP25LQ8N5L8 163 aaKnown RBP5.92□□□□□ -1.46
TPM1-231ENST00000561395 STPG3Q8N7X2 389 aa5.92□□□□□ -1.46
TPM1-231ENST00000561395 THAP8Q8NA92 274 aa5.92□□□□□ -1.46
TPM1-231ENST00000561395 LFNGQ8NES3 379 aa5.92□□□□□ -1.46
TPM1-231ENST00000561395 OR1L6Q8NGR2 347 aa5.92□□□□□ -1.46
TPM1-231ENST00000561395 OR2T6Q8NHC8 308 aa5.92□□□□□ -1.46
TPM1-231ENST00000561395 NANPQ8TBE9 248 aa5.92□□□□□ -1.46
TPM1-231ENST00000561395 MBD3L1Q8WWY6 194 aa5.92□□□□□ -1.46
TPM1-231ENST00000561395 MISP3Q96FF7 219 aa5.92□□□□□ -1.46
TPM1-231ENST00000561395 ACY3Q96HD9 319 aa5.92□□□□□ -1.46
TPM1-231ENST00000561395 SSX3Q99909 188 aa5.92□□□□□ -1.46
TPM1-231ENST00000561395 HSPB9Q9BQS6 159 aa5.92□□□□□ -1.46
TPM1-231ENST00000561395 SLC25A33Q9BSK2 321 aa5.92□□□□□ -1.46
TPM1-231ENST00000561395 FAM103A1Q9BTL3 118 aaKnown RBP5.92□□□□□ -1.46
TPM1-231ENST00000561395 SLC45A2Q9UMX9 530 aa5.92□□□□□ -1.46
TPM1-231ENST00000561395 SOX21Q9Y651 276 aaPredicted RBP5.92□□□□□ -1.46
TPM1-231ENST00000561395 PXMP4Q9Y6I8 212 aa5.92□□□□□ -1.46
TPM1-231ENST00000561395 CTXND1A0A1B0GTU2 59 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 A0A1B0GV50 99 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 A6NDX4 124 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 SEC14L6B5MCN3 397 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 KRBOX1C9JBD0 128 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 H3BUX3 64 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 MT-CO2P00403 227 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 EGR2P11161 476 aaPredicted RBP5.91□□□□□ -1.46
TPM1-231ENST00000561395 DEFA4P12838 97 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 ZP3P21754 424 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 OR10J1P30954 320 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 B2MP61769 119 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 SRSF3P84103 164 aaKnown RBP5.91□□□□□ -1.46
TPM1-231ENST00000561395 MLANAQ16655 118 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 C9orf139Q6ZV77 190 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 TTC9CQ8N5M4 171 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 BPIFCQ8NFQ6 507 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 OR10G4Q8NGN3 311 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 OR10G9Q8NGN4 311 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 OR10G7Q8NGN6 311 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 SFT2D1Q8WV19 159 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 LINC00052Q96N35 136 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 FAM210AQ96ND0 272 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 ACTR3CQ9C0K3 210 aaPredicted RBP5.91□□□□□ -1.46
TPM1-231ENST00000561395 WNT10AQ9GZT5 417 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 SLC25A22Q9H936 323 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 SLC39A9Q9NUM3 307 aa5.91□□□□□ -1.46
TPM1-231ENST00000561395 MRPL36Q9P0J6 103 aaKnown RBP5.91□□□□□ -1.46
TPM1-231ENST00000561395 RYR3Q15413 4870 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 IGKV1D-37A0A075B6S9 117 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 MDFIC2A0A1B0GVS7 189 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 TCRBV4S1A1TA0A5B7 111 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 MAP1LC3B2A6NCE7 125 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 I3L2K1 104 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 K7EIM0 57 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 ATP6V0E1O15342 81 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 IGHV3-48P01763 117 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 AMY1AP04745 511 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 CD5P06127 495 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 LINC00869P0C866 280 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 CDC34P49427 236 aaPredicted RBP5.9□□□□□ -1.46
TPM1-231ENST00000561395 RND2P52198 227 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 CCL20P78556 96 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 DEFB112Q30KQ8 113 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 GCSAMLQ5JQS6 135 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 FAM122CQ6P4D5 195 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 LCN15Q6UWW0 184 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 CYP2G1PQ6ZSU1 146 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 C16orf82Q7Z2V1 217 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 BCL6BQ8N143 479 aaPredicted RBP5.9□□□□□ -1.46
TPM1-231ENST00000561395 TMEM116Q8NCL8 245 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 C22orf15Q8WYQ4 148 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 NPIPB3Q92617 1050 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 NARS2Q96I59 477 aaKnown RBP5.9□□□□□ -1.46
TPM1-231ENST00000561395 FANCD2OSQ96PS1 177 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 PBDC1Q9BVG4 233 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 SCRT1Q9BWW7 348 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 MAP1LC3BQ9GZQ8 125 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 TMEM231Q9H6L2 316 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 PITPNC1Q9UKF7 332 aa5.9□□□□□ -1.46
TPM1-231ENST00000561395 IGLV11-55A0A075B6I3 123 aa5.89□□□□□ -1.47
TPM1-231ENST00000561395 IGHV3-21A0A0B4J1V1 117 aa5.89□□□□□ -1.47
TPM1-231ENST00000561395 A0A1B0GUS0 222 aa5.89□□□□□ -1.47
TPM1-231ENST00000561395 TMEM218A2RU14 115 aa5.89□□□□□ -1.47
TPM1-231ENST00000561395 SH2D7A6NKC9 451 aaPredicted RBP5.89□□□□□ -1.47
TPM1-231ENST00000561395 ZFP92A6NM28 416 aa5.89□□□□□ -1.47
TPM1-231ENST00000561395 M0QZK8 103 aa5.89□□□□□ -1.47
TPM1-231ENST00000561395 CYB5BO43169 146 aa5.89□□□□□ -1.47
TPM1-231ENST00000561395 CRYBA1P05813 215 aa5.89□□□□□ -1.47
TPM1-231ENST00000561395 CRIP2P52943 208 aaPredicted RBP5.89□□□□□ -1.47
TPM1-231ENST00000561395 FGF8P55075 233 aaPredicted RBP5.89□□□□□ -1.47
TPM1-231ENST00000561395 SELENOTP62341 195 aa5.89□□□□□ -1.47
TPM1-231ENST00000561395 LY6EQ16553 131 aa5.89□□□□□ -1.47
TPM1-231ENST00000561395 GUK1Q16774 197 aa5.89□□□□□ -1.47
TPM1-231ENST00000561395 KLK9Q2XQG4 91 aa5.89□□□□□ -1.47
TPM1-231ENST00000561395 OR4X1Q8NH49 305 aa5.89□□□□□ -1.47
TPM1-231ENST00000561395 FAM110DQ8TAY7 271 aaPredicted RBP5.89□□□□□ -1.47
TPM1-231ENST00000561395 RAB24Q969Q5 203 aa5.89□□□□□ -1.47
TPM1-231ENST00000561395 TRGV9Q99603 122 aa5.89□□□□□ -1.47
TPM1-231ENST00000561395 TREM1Q9NP99 234 aa5.89□□□□□ -1.47
TPM1-231ENST00000561395 KLK9Q9UKQ9 250 aa5.89□□□□□ -1.47
TPM1-231ENST00000561395 LOC102723971A0A1B0GUV8 181 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 A0A1W2PPV4 95 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms