RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 TNFAIP6P98066 277 aaPredicted RBP2.47□□□□□ -2.01
SPG11-225ENST00000561391 MEF2CQ06413 473 aaPredicted RBP2.47□□□□□ -2.01
SPG11-225ENST00000561391 AESQ08117 197 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 Q3ZCU0 254 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 SPRNQ5BIV9 151 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 RPL7L1Q6DKI1 246 aaKnown RBP2.47□□□□□ -2.01
SPG11-225ENST00000561391 ZNF818PQ6ZRF7 136 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 RBPMS2Q6ZRY4 209 aaKnown RBP2.47□□□□□ -2.01
SPG11-225ENST00000561391 WDR86Q86TI4 376 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 RTN4RL2Q86UN3 420 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 C11orf53Q8IXP5 236 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 FGFRL1Q8N441 504 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 THAP8Q8NA92 274 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 OR1S2Q8NGQ3 325 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 OR8U1Q8NH10 309 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 OR52E5Q8NH55 327 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 OR51H1Q8NH63 302 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 LYPD6BQ8NI32 183 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 SUN5Q8TC36 379 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 LRRC29Q8WV35 223 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 CORO2AQ92828 525 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 SDSLQ96GA7 329 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 NARS2Q96I59 477 aaKnown RBP2.47□□□□□ -2.01
SPG11-225ENST00000561391 ZNF488Q96MN9 340 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 C18orf15Q96N68 181 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 YPEL2Q96QA6 119 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 TP53RKQ96S44 253 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 ZNF251Q9BRH9 671 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 GGACTQ9BVM4 153 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 SEC11CQ9BY50 192 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 PARD6GQ9BYG4 376 aaPredicted RBP2.47□□□□□ -2.01
SPG11-225ENST00000561391 FGF23Q9GZV9 251 aaPredicted RBP2.47□□□□□ -2.01
SPG11-225ENST00000561391 LINC00574Q9H8X3 128 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 FKBP11Q9NYL4 201 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 OR5AC2Q9NZP5 309 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 GNG12Q9UBI6 72 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 PPP1R3CQ9UQK1 317 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 PRELID3BQ9Y3B1 194 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 FBXO7Q9Y3I1 522 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 VPS13DQ5THJ4 4388 aa2.47□□□□□ -2.01
SPG11-225ENST00000561391 SRRM2Q9UQ35 2752 aaKnown RBP2.46□□□□□ -2.02
SPG11-225ENST00000561391 A0A087WYN8 130 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 TRAV1-1A0A0B4J248 108 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 IGKV1-6A0A0C4DH72 117 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 KBTBD11-OT1A0A1B0GTJ5 212 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 A0A1W2PRV1 198 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 NKX6-3A6NJ46 265 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 ZNF729A6NN14 1252 aaPredicted RBP2.46□□□□□ -2.02
SPG11-225ENST00000561391 C12orf77C9JDV5 145 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 F8W036 122 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 H3BUX3 64 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 RAB29O14966 203 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 TXNL1O43396 289 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 SSSCA1O60232 199 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 MPDU1O75352 247 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 ZNF737O75373 536 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 HPRT1P00492 218 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 HRASP01112 189 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 APOC3P02656 99 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 FBP1P09467 338 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 PSG2P11465 335 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 CNTFRP26992 372 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 LPAR6P43657 344 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 OR3A1P47881 315 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 CAMLGP49069 296 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 PPT1P50897 306 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 SPCS3P61009 180 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 UBE2KP61086 200 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 ERVK-16P61578 105 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 ARF6P62330 175 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 POLR2GP62487 172 aaKnown RBP eCLIP2.46□□□□□ -2.02
SPG11-225ENST00000561391 DEFA5Q01523 94 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 EWSR1Q01844 656 aaKnown RBP eCLIP2.46□□□□□ -2.02
SPG11-225ENST00000561391 PRB3Q04118 309 aaPredicted RBP2.46□□□□□ -2.02
SPG11-225ENST00000561391 RAB31Q13636 194 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 AARDQ4LEZ3 155 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 TMEM155Q4W5P6 130 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 C10orf91Q5T1B1 145 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 AKR1C8PQ5T2L2 129 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 SLC25A24Q6NUK1 477 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 H2BFWTQ7Z2G1 175 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 ZNF329Q86UD4 541 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 PUSL1Q8N0Z8 303 aaKnown RBP2.46□□□□□ -2.02
SPG11-225ENST00000561391 DRAM1Q8N682 238 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 TMEM252Q8N6L7 170 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 ZNF709Q8N972 641 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 C8orf31Q8N9H6 132 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 PLPPR1Q8TBJ4 325 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 GPR146Q96CH1 333 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 CXorf58Q96LI9 332 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 OR2V2Q96R30 315 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 S1PR3Q99500 378 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 ATP5SQ99766 215 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 SSX3Q99909 188 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 PSMG3Q9BT73 122 aaPredicted RBP2.46□□□□□ -2.02
SPG11-225ENST00000561391 GAL3ST2Q9H3Q3 398 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 TREM1Q9NP99 234 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 KCNIP2Q9NS61 270 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 UFSP2Q9NUQ7 469 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 UQCC1Q9NVA1 299 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms