RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 DIRAS2Q96HU8 199 aa11.83□□□□□ -0.52
SNX1-213ENST00000561026 PRRT1Q99946 306 aa11.83□□□□□ -0.52
SNX1-213ENST00000561026 TMEM56-RWDD3S4R434 201 aa11.83□□□□□ -0.52
SNX1-213ENST00000561026 U3KQE9 123 aa11.83□□□□□ -0.52
SNX1-213ENST00000561026 CEBPZOSA8MTT3 80 aa11.82□□□□□ -0.52
SNX1-213ENST00000561026 DEFB4AO15263 64 aa11.82□□□□□ -0.52
SNX1-213ENST00000561026 GIG44P09565 113 aaPredicted RBP11.82□□□□□ -0.52
SNX1-213ENST00000561026 RND2P52198 227 aa11.82□□□□□ -0.52
SNX1-213ENST00000561026 YPEL3P61236 119 aaPredicted RBP11.82□□□□□ -0.52
SNX1-213ENST00000561026 IL18Q14116 193 aa11.82□□□□□ -0.52
SNX1-213ENST00000561026 LGALS9CQ6DKI2 356 aa11.82□□□□□ -0.52
SNX1-213ENST00000561026 TRPT1Q86TN4 253 aaKnown RBP11.82□□□□□ -0.52
SNX1-213ENST00000561026 OR51S1Q8NGJ8 323 aa11.82□□□□□ -0.52
SNX1-213ENST00000561026 OR1S2Q8NGQ3 325 aa11.82□□□□□ -0.52
SNX1-213ENST00000561026 Q8WTZ3 238 aa11.82□□□□□ -0.52
SNX1-213ENST00000561026 TMEM170AQ8WVE7 144 aa11.82□□□□□ -0.52
SNX1-213ENST00000561026 RABL2AQ9UBK7 228 aaPredicted RBP11.82□□□□□ -0.52
SNX1-213ENST00000561026 FBXL17Q9UF56 701 aa11.82□□□□□ -0.52
SNX1-213ENST00000561026 CACFD1Q9UGQ2 172 aa11.82□□□□□ -0.52
SNX1-213ENST00000561026 RABL2BQ9UNT1 228 aa11.82□□□□□ -0.52
SNX1-213ENST00000561026 IFNA4P05014 189 aa11.81□□□□□ -0.52
SNX1-213ENST00000561026 ZNF688P0C7X2 276 aa11.81□□□□□ -0.52
SNX1-213ENST00000561026 OR10J1P30954 320 aa11.81□□□□□ -0.52
SNX1-213ENST00000561026 NMSQ5H8A3 153 aa11.81□□□□□ -0.52
SNX1-213ENST00000561026 RPP25LQ8N5L8 163 aaKnown RBP11.81□□□□□ -0.52
SNX1-213ENST00000561026 AGRNO00468 2067 aa11.81□□□□□ -0.52
SNX1-213ENST00000561026 ANKRD20A5PA0PJZ0 165 aa11.8□□□□□ -0.52
SNX1-213ENST00000561026 SPP1P10451 314 aa11.8□□□□□ -0.52
SNX1-213ENST00000561026 EIF2B2P49770 351 aaKnown RBP11.8□□□□□ -0.52
SNX1-213ENST00000561026 TMEM41BQ5BJD5 291 aa11.8□□□□□ -0.52
SNX1-213ENST00000561026 ETFRF1Q6IPR1 90 aa11.8□□□□□ -0.52
SNX1-213ENST00000561026 MORN3Q6PF18 240 aaPredicted RBP11.8□□□□□ -0.52
SNX1-213ENST00000561026 CLVS1Q8IUQ0 354 aaPredicted RBP11.8□□□□□ -0.52
SNX1-213ENST00000561026 DYNC2LI1Q8TCX1 351 aa11.8□□□□□ -0.52
SNX1-213ENST00000561026 RAB2BQ8WUD1 216 aa11.8□□□□□ -0.52
SNX1-213ENST00000561026 GLMPQ8WWB7 406 aa11.8□□□□□ -0.52
SNX1-213ENST00000561026 IL22RA2Q969J5 263 aa11.8□□□□□ -0.52
SNX1-213ENST00000561026 CCDC59Q9P031 241 aaKnown RBP11.8□□□□□ -0.52
SNX1-213ENST00000561026 KCNIP3Q9Y2W7 256 aa11.8□□□□□ -0.52
SNX1-213ENST00000561026 FRAS1Q86XX4 4008 aa11.8□□□□□ -0.52
SNX1-213ENST00000561026 HELTA6NFD8 242 aa11.79□□□□□ -0.52
SNX1-213ENST00000561026 KNCNA6PVL3 124 aa11.79□□□□□ -0.52
SNX1-213ENST00000561026 GSTZ1O43708 216 aaPredicted RBP11.79□□□□□ -0.52
SNX1-213ENST00000561026 NXPH3O95157 252 aa11.79□□□□□ -0.52
SNX1-213ENST00000561026 HNRNPCP07910 306 aaKnown RBP eCLIP11.79□□□□□ -0.52
SNX1-213ENST00000561026 SULT1A3P0DMM9 295 aa11.79□□□□□ -0.52
SNX1-213ENST00000561026 SULT1A4P0DMN0 295 aa11.79□□□□□ -0.52
SNX1-213ENST00000561026 NPY1RP25929 384 aa11.79□□□□□ -0.52
SNX1-213ENST00000561026 AP2S1P53680 142 aaPredicted RBP11.79□□□□□ -0.52
SNX1-213ENST00000561026 ACTL10Q5JWF8 245 aa11.79□□□□□ -0.52
SNX1-213ENST00000561026 C16orf54Q6UWD8 224 aa11.79□□□□□ -0.52
SNX1-213ENST00000561026 NOXA1Q86UR1 476 aa11.79□□□□□ -0.52
SNX1-213ENST00000561026 Q8NAQ8 132 aa11.79□□□□□ -0.52
SNX1-213ENST00000561026 NPIPB3Q92617 1050 aa11.79□□□□□ -0.52
SNX1-213ENST00000561026 PRR13Q9NZ81 148 aa11.79□□□□□ -0.52
SNX1-213ENST00000561026 SCP2D1Q9UJQ7 156 aa11.79□□□□□ -0.52
SNX1-213ENST00000561026 TMBIM6P55061 237 aa11.79□□□□□ -0.52
SNX1-213ENST00000561026 DHRS2Q13268 280 aa11.79□□□□□ -0.52
SNX1-213ENST00000561026 USF2Q15853 346 aaPredicted RBP11.79□□□□□ -0.52
SNX1-213ENST00000561026 SCGB3A2Q96PL1 93 aa11.79□□□□□ -0.52
SNX1-213ENST00000561026 BCL7BQ9BQE9 202 aa11.79□□□□□ -0.52
SNX1-213ENST00000561026 HRH4Q9H3N8 390 aa11.79□□□□□ -0.52
SNX1-213ENST00000561026 RSL24D1Q9UHA3 163 aaKnown RBP11.79□□□□□ -0.52
SNX1-213ENST00000561026 DEDDO75618 318 aa11.78□□□□□ -0.52
SNX1-213ENST00000561026 IL4P05112 153 aa11.78□□□□□ -0.52
SNX1-213ENST00000561026 RBMY1A1P0DJD3 496 aaKnown RBP11.78□□□□□ -0.52
SNX1-213ENST00000561026 RBMY1CP0DJD4 496 aa11.78□□□□□ -0.52
SNX1-213ENST00000561026 RD3LP0DJH9 198 aa11.78□□□□□ -0.52
SNX1-213ENST00000561026 C4BPBP20851 252 aa11.78□□□□□ -0.52
SNX1-213ENST00000561026 RBMY1FQ15415 496 aaKnown RBP11.78□□□□□ -0.52
SNX1-213ENST00000561026 C2CD4CQ8TF44 421 aa11.78□□□□□ -0.52
SNX1-213ENST00000561026 ACY3Q96HD9 319 aa11.78□□□□□ -0.52
SNX1-213ENST00000561026 RAB40CQ96S21 281 aa11.78□□□□□ -0.52
SNX1-213ENST00000561026 U3KQ87 197 aa11.78□□□□□ -0.52
SNX1-213ENST00000561026 A0A0B4J2A0 478 aa11.77□□□□□ -0.53
SNX1-213ENST00000561026 IGHV4-28A0A0C4DH34 117 aa11.77□□□□□ -0.53
SNX1-213ENST00000561026 ZNF705EA8MWA4 302 aaPredicted RBP11.77□□□□□ -0.53
SNX1-213ENST00000561026 BUB3O43684 328 aa11.77□□□□□ -0.53
SNX1-213ENST00000561026 TOMM40O96008 361 aa11.77□□□□□ -0.53
SNX1-213ENST00000561026 IFNA10P01566 189 aa11.77□□□□□ -0.53
SNX1-213ENST00000561026 MIFP14174 115 aa11.77□□□□□ -0.53
SNX1-213ENST00000561026 AKR1C4P17516 323 aa11.77□□□□□ -0.53
SNX1-213ENST00000561026 CCR6P51684 374 aa11.77□□□□□ -0.53
SNX1-213ENST00000561026 TCTAP57738 103 aa11.77□□□□□ -0.53
SNX1-213ENST00000561026 SUPT4H1P63272 117 aaKnown RBP11.77□□□□□ -0.53
SNX1-213ENST00000561026 SMCO1Q147U7 214 aa11.77□□□□□ -0.53
SNX1-213ENST00000561026 PSMG4Q5JS54 123 aa11.77□□□□□ -0.53
SNX1-213ENST00000561026 SOSTQ9BQB4 213 aa11.77□□□□□ -0.53
SNX1-213ENST00000561026 SLIRPQ9GZT3 109 aaKnown RBP11.77□□□□□ -0.53
SNX1-213ENST00000561026 MCUBQ9NWR8 336 aa11.77□□□□□ -0.53
SNX1-213ENST00000561026 HSPB7Q9UBY9 170 aa11.77□□□□□ -0.53
SNX1-213ENST00000561026 SHPKQ9UHJ6 478 aa11.77□□□□□ -0.53
SNX1-213ENST00000561026 C11orf94C9JXX5 98 aa11.76□□□□□ -0.53
SNX1-213ENST00000561026 TNFSF8P32971 234 aa11.76□□□□□ -0.53
SNX1-213ENST00000561026 LYZL2Q7Z4W2 148 aa11.76□□□□□ -0.53
SNX1-213ENST00000561026 CSNK1G2-AS1Q8NCQ2 148 aa11.76□□□□□ -0.53
SNX1-213ENST00000561026 DTD1Q8TEA8 209 aa11.76□□□□□ -0.53
SNX1-213ENST00000561026 SEPSECSQ9HD40 501 aaKnown RBP11.76□□□□□ -0.53
SNX1-213ENST00000561026 CLEC5AQ9NY25 188 aa11.76□□□□□ -0.53
SNX1-213ENST00000561026 X6R8D5 127 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms