RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 C4orf48Q5BLP8 95 aa8.06□□□□□ -1.12
TPM1-227ENST00000560970 UBAC2Q8NBM4 344 aa8.06□□□□□ -1.12
TPM1-227ENST00000560970 OR1L6Q8NGR2 347 aa8.06□□□□□ -1.12
TPM1-227ENST00000560970 TMEM170AQ8WVE7 144 aa8.06□□□□□ -1.12
TPM1-227ENST00000560970 CACNG8Q8WXS5 425 aa8.06□□□□□ -1.12
TPM1-227ENST00000560970 PINX1Q96BK5 328 aaKnown RBP8.06□□□□□ -1.12
TPM1-227ENST00000560970 FNDC4Q9H6D8 234 aaPredicted RBP8.06□□□□□ -1.12
TPM1-227ENST00000560970 MRPL36Q9P0J6 103 aaKnown RBP8.06□□□□□ -1.12
TPM1-227ENST00000560970 HSPB7Q9UBY9 170 aa8.06□□□□□ -1.12
TPM1-227ENST00000560970 PAIP2BQ9ULR5 123 aaKnown RBP8.06□□□□□ -1.12
TPM1-227ENST00000560970 FRAS1Q86XX4 4008 aa8.06□□□□□ -1.12
TPM1-227ENST00000560970 TMEM213A2RRL7 107 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 RBMY1BA6NDE4 496 aaKnown RBP8.05□□□□□ -1.12
TPM1-227ENST00000560970 C5orf51A6NDU8 294 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 RBMY1EA6NEQ0 496 aaKnown RBP8.05□□□□□ -1.12
TPM1-227ENST00000560970 C2orf70A6NJV1 201 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 CEBPZOSA8MTT3 80 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 MPTX1A8MV57 137 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 FAM25EA8MYX2 175 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 LGALS9O00182 355 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 PITX3O75364 302 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 ADAP1O75689 374 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 HOXB5P09067 269 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 CD7P09564 240 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 RBMY1DP0C7P1 496 aaKnown RBP8.05□□□□□ -1.12
TPM1-227ENST00000560970 SLC25A4P12235 298 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 IFITM2Q01629 132 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 Q56UQ5 140 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 Q5BKY6 102 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 GGNBP1Q5YKI7 109 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 GPHB5Q86YW7 130 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 BSCL2Q96G97 398 aaPredicted RBP8.05□□□□□ -1.12
TPM1-227ENST00000560970 C2orf50Q96LR7 162 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 RBKSQ9H477 322 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 ENY2Q9NPA8 101 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 SELENOKQ9Y6D0 94 aa8.05□□□□□ -1.12
TPM1-227ENST00000560970 FXYD6-FXYD2A0A087WZ82 144 aa8.04□□□□□ -1.12
TPM1-227ENST00000560970 TRAV14DV4A0A0A6YYC5 116 aa8.04□□□□□ -1.12
TPM1-227ENST00000560970 A0A1B0GU03 582 aa8.04□□□□□ -1.12
TPM1-227ENST00000560970 A8MWP6 167 aa8.04□□□□□ -1.12
TPM1-227ENST00000560970 OR11H12B2RN74 326 aa8.04□□□□□ -1.12
TPM1-227ENST00000560970 PET100P0DJ07 73 aa8.04□□□□□ -1.12
TPM1-227ENST00000560970 SNCAP37840 140 aa8.04□□□□□ -1.12
TPM1-227ENST00000560970 MLANAQ16655 118 aa8.04□□□□□ -1.12
TPM1-227ENST00000560970 GUCA2BQ16661 112 aa8.04□□□□□ -1.12
TPM1-227ENST00000560970 DEFB125Q8N687 156 aa8.04□□□□□ -1.12
TPM1-227ENST00000560970 SLC24A4Q8NFF2 622 aa8.04□□□□□ -1.12
TPM1-227ENST00000560970 OR1S1Q8NH92 325 aa8.04□□□□□ -1.12
TPM1-227ENST00000560970 PPP1R1CQ8WVI7 109 aa8.04□□□□□ -1.12
TPM1-227ENST00000560970 LINC00476Q8WZB0 136 aa8.04□□□□□ -1.12
TPM1-227ENST00000560970 WDR89Q96FK6 387 aaPredicted RBP8.04□□□□□ -1.12
TPM1-227ENST00000560970 TECRQ9NZ01 308 aaKnown RBP8.04□□□□□ -1.12
TPM1-227ENST00000560970 IGHV3OR16-8A0A075B7F1 116 aa8.03□□□□□ -1.12
TPM1-227ENST00000560970 L7N2F9 121 aa8.03□□□□□ -1.12
TPM1-227ENST00000560970 CTSGP08311 255 aa8.03□□□□□ -1.12
TPM1-227ENST00000560970 IAPPP10997 89 aa8.03□□□□□ -1.12
TPM1-227ENST00000560970 FOLR2P14207 255 aa8.03□□□□□ -1.12
TPM1-227ENST00000560970 NPY1RP25929 384 aa8.03□□□□□ -1.12
TPM1-227ENST00000560970 FCGR2BP31994 310 aaPredicted RBP8.03□□□□□ -1.12
TPM1-227ENST00000560970 MFAP4P55083 255 aa8.03□□□□□ -1.12
TPM1-227ENST00000560970 ZNF345Q14585 488 aa8.03□□□□□ -1.12
TPM1-227ENST00000560970 DEFB114Q30KQ6 69 aa8.03□□□□□ -1.12
TPM1-227ENST00000560970 LGALSLQ3ZCW2 172 aaPredicted RBP8.03□□□□□ -1.12
TPM1-227ENST00000560970 TM4SF20Q53R12 229 aa8.03□□□□□ -1.12
TPM1-227ENST00000560970 C2orf83Q53S99 150 aa8.03□□□□□ -1.12
TPM1-227ENST00000560970 SPSB3Q6PJ21 355 aa8.03□□□□□ -1.12
TPM1-227ENST00000560970 SLC16A13Q7RTY0 426 aa8.03□□□□□ -1.12
TPM1-227ENST00000560970 THAP6Q8TBB0 222 aa8.03□□□□□ -1.12
TPM1-227ENST00000560970 DTD1Q8TEA8 209 aa8.03□□□□□ -1.12
TPM1-227ENST00000560970 TMEM190Q8WZ59 177 aa8.03□□□□□ -1.12
TPM1-227ENST00000560970 ATP6V0BQ99437 205 aa8.03□□□□□ -1.12
TPM1-227ENST00000560970 HEYLQ9NQ87 328 aaPredicted RBP8.03□□□□□ -1.12
TPM1-227ENST00000560970 TMED3Q9Y3Q3 217 aa8.03□□□□□ -1.12
TPM1-227ENST00000560970 A0A0D9SG52 128 aa8.02□□□□□ -1.13
TPM1-227ENST00000560970 ZNF320A2RRD8 509 aa8.02□□□□□ -1.13
TPM1-227ENST00000560970 ZNF785A8K8V0 405 aa8.02□□□□□ -1.13
TPM1-227ENST00000560970 ARPC5O15511 151 aa8.02□□□□□ -1.13
TPM1-227ENST00000560970 MPC2O95563 127 aa8.02□□□□□ -1.13
TPM1-227ENST00000560970 SLC25A6P12236 298 aa8.02□□□□□ -1.13
TPM1-227ENST00000560970 CXCL2P19875 107 aa8.02□□□□□ -1.13
TPM1-227ENST00000560970 OPRK1P41145 380 aa8.02□□□□□ -1.13
TPM1-227ENST00000560970 HTR2BP41595 481 aa8.02□□□□□ -1.13
TPM1-227ENST00000560970 IL15RAQ13261 267 aa8.02□□□□□ -1.13
TPM1-227ENST00000560970 OR2F1Q13607 317 aa8.02□□□□□ -1.13
TPM1-227ENST00000560970 IAH1Q2TAA2 248 aaPredicted RBP8.02□□□□□ -1.13
TPM1-227ENST00000560970 FAM106AQ4KMX7 169 aa8.02□□□□□ -1.13
TPM1-227ENST00000560970 ZNF767PQ75MW2 155 aa8.02□□□□□ -1.13
TPM1-227ENST00000560970 TMEM61Q8N0U2 210 aa8.02□□□□□ -1.13
TPM1-227ENST00000560970 GGTLC1Q9BX51 225 aa8.02□□□□□ -1.13
TPM1-227ENST00000560970 MLXQ9UH92 298 aa8.02□□□□□ -1.13
TPM1-227ENST00000560970 TNFSF18Q9UNG2 199 aa8.02□□□□□ -1.13
TPM1-227ENST00000560970 C15orf62A8K5M9 175 aa8.01□□□□□ -1.13
TPM1-227ENST00000560970 CORTO00230 105 aa8.01□□□□□ -1.13
TPM1-227ENST00000560970 NDUFA4O00483 81 aa8.01□□□□□ -1.13
TPM1-227ENST00000560970 ZNF207O43670 478 aaKnown RBP8.01□□□□□ -1.13
TPM1-227ENST00000560970 GNG7O60262 68 aa8.01□□□□□ -1.13
TPM1-227ENST00000560970 CBLN1P23435 193 aa8.01□□□□□ -1.13
TPM1-227ENST00000560970 S100A11P31949 105 aa8.01□□□□□ -1.13
TPM1-227ENST00000560970 SUB1P53999 127 aaKnown RBP eCLIP8.01□□□□□ -1.13
TPM1-227ENST00000560970 OPCMLQ14982 345 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms