RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 TRAV14DV4A0A0A6YYC5 116 aa13.14□□□□□ -0.31
RPL28-210ENST00000560583 A0A0B4J2A0 478 aa13.14□□□□□ -0.31
RPL28-210ENST00000560583 RNASE2P10153 161 aaKnown RBP13.14□□□□□ -0.31
RPL28-210ENST00000560583 HTR2BP41595 481 aa13.14□□□□□ -0.31
RPL28-210ENST00000560583 CCR6P51684 374 aa13.14□□□□□ -0.31
RPL28-210ENST00000560583 GBGT1Q8N5D6 347 aa13.14□□□□□ -0.31
RPL28-210ENST00000560583 OR1S1Q8NH92 325 aa13.14□□□□□ -0.31
RPL28-210ENST00000560583 VSIRQ9H7M9 311 aa13.14□□□□□ -0.31
RPL28-210ENST00000560583 MRPL36Q9P0J6 103 aaKnown RBP13.14□□□□□ -0.31
RPL28-210ENST00000560583 SHPKQ9UHJ6 478 aa13.14□□□□□ -0.31
RPL28-210ENST00000560583 A0A1B0GU03 582 aa13.13□□□□□ -0.31
RPL28-210ENST00000560583 RPS10-NUDT3A0A1W2PQS6 291 aa13.13□□□□□ -0.31
RPL28-210ENST00000560583 LY6G6CO95867 125 aa13.13□□□□□ -0.31
RPL28-210ENST00000560583 SUPT4H1P63272 117 aaKnown RBP13.13□□□□□ -0.31
RPL28-210ENST00000560583 SMCO1Q147U7 214 aa13.13□□□□□ -0.31
RPL28-210ENST00000560583 BAK1Q16611 211 aa13.13□□□□□ -0.31
RPL28-210ENST00000560583 TCF24Q7RTU0 167 aa13.13□□□□□ -0.31
RPL28-210ENST00000560583 LYZL2Q7Z4W2 148 aa13.13□□□□□ -0.31
RPL28-210ENST00000560583 PUS1Q9Y606 427 aaKnown RBP eCLIP13.13□□□□□ -0.31
RPL28-210ENST00000560583 DNAH10Q8IVF4 4471 aa13.13□□□□□ -0.31
RPL28-210ENST00000560583 VPS13DQ5THJ4 4388 aa13.12□□□□□ -0.31
RPL28-210ENST00000560583 IGHV3-66A0A0C4DH42 116 aa13.12□□□□□ -0.31
RPL28-210ENST00000560583 ZNF600Q6ZNG1 722 aa13.12□□□□□ -0.31
RPL28-210ENST00000560583 NOXA1Q86UR1 476 aa13.12□□□□□ -0.31
RPL28-210ENST00000560583 FAM24BQ8N5W8 94 aa13.12□□□□□ -0.31
RPL28-210ENST00000560583 SLC24A4Q8NFF2 622 aa13.12□□□□□ -0.31
RPL28-210ENST00000560583 GINS3Q9BRX5 216 aa13.12□□□□□ -0.31
RPL28-210ENST00000560583 CSTL1Q9H114 145 aa13.12□□□□□ -0.31
RPL28-210ENST00000560583 FNDC4Q9H6D8 234 aaPredicted RBP13.12□□□□□ -0.31
RPL28-210ENST00000560583 DUXBA0A1W2PPF3 345 aa13.11□□□□□ -0.31
RPL28-210ENST00000560583 MPTX1A8MV57 137 aa13.11□□□□□ -0.31
RPL28-210ENST00000560583 BSXQ3C1V8 233 aa13.11□□□□□ -0.31
RPL28-210ENST00000560583 DFFBO76075 338 aa13.1□□□□□ -0.31
RPL28-210ENST00000560583 SFT2D2O95562 160 aa13.1□□□□□ -0.31
RPL28-210ENST00000560583 TMEM50AO95807 157 aa13.1□□□□□ -0.31
RPL28-210ENST00000560583 IFNA10P01566 189 aa13.1□□□□□ -0.31
RPL28-210ENST00000560583 NPY1RP25929 384 aa13.1□□□□□ -0.31
RPL28-210ENST00000560583 PPP1R1AQ13522 171 aa13.1□□□□□ -0.31
RPL28-210ENST00000560583 AARDQ4LEZ3 155 aa13.1□□□□□ -0.31
RPL28-210ENST00000560583 NMSQ5H8A3 153 aa13.1□□□□□ -0.31
RPL28-210ENST00000560583 C7orf50Q9BRJ6 194 aaKnown RBP13.1□□□□□ -0.31
RPL28-210ENST00000560583 MS4A6AQ9H2W1 248 aa13.1□□□□□ -0.31
RPL28-210ENST00000560583 IL7P13232 177 aa13.09□□□□□ -0.31
RPL28-210ENST00000560583 CMC4P56277 68 aaPredicted RBP13.09□□□□□ -0.31
RPL28-210ENST00000560583 UBE2MP61081 183 aaKnown RBP13.09□□□□□ -0.31
RPL28-210ENST00000560583 C2orf83Q53S99 150 aa13.09□□□□□ -0.31
RPL28-210ENST00000560583 LEMD1Q68G75 181 aa13.09□□□□□ -0.31
RPL28-210ENST00000560583 TMEM217Q8N7C4 229 aa13.09□□□□□ -0.31
RPL28-210ENST00000560583 DTD1Q8TEA8 209 aa13.09□□□□□ -0.31
RPL28-210ENST00000560583 GATAD1Q8WUU5 269 aa13.09□□□□□ -0.31
RPL28-210ENST00000560583 AGRNO00468 2067 aa13.09□□□□□ -0.31
RPL28-210ENST00000560583 NDUFB6O95139 128 aa13.08□□□□□ -0.32
RPL28-210ENST00000560583 DEFB131AP59861 70 aa13.08□□□□□ -0.32
RPL28-210ENST00000560583 MLANAQ16655 118 aa13.08□□□□□ -0.32
RPL28-210ENST00000560583 ETFRF1Q6IPR1 90 aa13.08□□□□□ -0.32
RPL28-210ENST00000560583 RNASEH2CQ8TDP1 164 aaKnown RBP13.08□□□□□ -0.32
RPL28-210ENST00000560583 PHLDA1Q8WV24 401 aaPredicted RBP13.08□□□□□ -0.32
RPL28-210ENST00000560583 RARRES2Q99969 163 aa13.08□□□□□ -0.32
RPL28-210ENST00000560583 C11orf68Q9H3H3 251 aaKnown RBP13.08□□□□□ -0.32
RPL28-210ENST00000560583 RBKSQ9H477 322 aa13.08□□□□□ -0.32
RPL28-210ENST00000560583 DNAH6Q9C0G6 4158 aa13.07□□□□□ -0.32
RPL28-210ENST00000560583 TRAV30A0A087WSZ9 112 aa13.07□□□□□ -0.32
RPL28-210ENST00000560583 TRAV2A0A0B4J234 112 aa13.07□□□□□ -0.32
RPL28-210ENST00000560583 CLN5O75503 358 aa13.07□□□□□ -0.32
RPL28-210ENST00000560583 CA1P00915 261 aaPredicted RBP13.07□□□□□ -0.32
RPL28-210ENST00000560583 IGKV1-17P01599 117 aa13.07□□□□□ -0.32
RPL28-210ENST00000560583 CD5P06127 495 aa13.07□□□□□ -0.32
RPL28-210ENST00000560583 HOXB5P09067 269 aa13.07□□□□□ -0.32
RPL28-210ENST00000560583 C4orf46Q504U0 113 aa13.07□□□□□ -0.32
RPL28-210ENST00000560583 OR4X1Q8NH49 305 aa13.07□□□□□ -0.32
RPL28-210ENST00000560583 COQ8AQ8NI60 647 aa13.07□□□□□ -0.32
RPL28-210ENST00000560583 SDHCQ99643 169 aaPredicted RBP13.07□□□□□ -0.32
RPL28-210ENST00000560583 HSPB7Q9UBY9 170 aa13.07□□□□□ -0.32
RPL28-210ENST00000560583 PAIP2BQ9ULR5 123 aaKnown RBP13.07□□□□□ -0.32
RPL28-210ENST00000560583 KLK5Q9Y337 293 aaPredicted RBP13.07□□□□□ -0.32
RPL28-210ENST00000560583 TMED3Q9Y3Q3 217 aa13.07□□□□□ -0.32
RPL28-210ENST00000560583 MED6O75586 246 aa13.06□□□□□ -0.32
RPL28-210ENST00000560583 IFNA4P05014 189 aa13.06□□□□□ -0.32
RPL28-210ENST00000560583 SLC25A4P12235 298 aa13.06□□□□□ -0.32
RPL28-210ENST00000560583 RND2P52198 227 aa13.06□□□□□ -0.32
RPL28-210ENST00000560583 NANOS2P60321 138 aaKnown RBP13.06□□□□□ -0.32
RPL28-210ENST00000560583 PAFAH1B2P68402 229 aa13.06□□□□□ -0.32
RPL28-210ENST00000560583 RPP25LQ8N5L8 163 aaKnown RBP13.06□□□□□ -0.32
RPL28-210ENST00000560583 LRTM2Q8N967 370 aa13.06□□□□□ -0.32
RPL28-210ENST00000560583 OR11H2Q8NH07 326 aa13.06□□□□□ -0.32
RPL28-210ENST00000560583 NARS2Q96I59 477 aaKnown RBP13.06□□□□□ -0.32
RPL28-210ENST00000560583 U3KQ87 197 aa13.06□□□□□ -0.32
RPL28-210ENST00000560583 GIG44P09565 113 aaPredicted RBP13.05□□□□□ -0.32
RPL28-210ENST00000560583 CRYBB3P26998 211 aa13.05□□□□□ -0.32
RPL28-210ENST00000560583 TIGITQ495A1 244 aa13.05□□□□□ -0.32
RPL28-210ENST00000560583 OR1S2Q8NGQ3 325 aa13.05□□□□□ -0.32
RPL28-210ENST00000560583 TMEM170AQ8WVE7 144 aa13.05□□□□□ -0.32
RPL28-210ENST00000560583 ACY3Q96HD9 319 aa13.05□□□□□ -0.32
RPL28-210ENST00000560583 TMEM231Q9H6L2 316 aa13.05□□□□□ -0.32
RPL28-210ENST00000560583 FLVCR2Q9UPI3 526 aa13.05□□□□□ -0.32
RPL28-210ENST00000560583 C9orf170A2RU37 121 aa13.04□□□□□ -0.32
RPL28-210ENST00000560583 K7EQG2 157 aa13.04□□□□□ -0.32
RPL28-210ENST00000560583 DNASE2O00115 360 aaPredicted RBP13.04□□□□□ -0.32
RPL28-210ENST00000560583 DEFB4AO15263 64 aa13.04□□□□□ -0.32
RPL28-210ENST00000560583 LYRM1O43325 122 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms