RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 LILRB2Q8N423 598 aa13.29□□□□□ -0.28
TNFAIP2-206ENST00000560428 TOMM5Q8N4H5 51 aa13.29□□□□□ -0.28
TNFAIP2-206ENST00000560428 GBGT1Q8N5D6 347 aa13.29□□□□□ -0.28
TNFAIP2-206ENST00000560428 OR1S2Q8NGQ3 325 aa13.29□□□□□ -0.28
TNFAIP2-206ENST00000560428 RNF183Q96D59 192 aa13.29□□□□□ -0.28
TNFAIP2-206ENST00000560428 MS4A6AQ9H2W1 248 aa13.29□□□□□ -0.28
TNFAIP2-206ENST00000560428 PRR13Q9NZ81 148 aa13.29□□□□□ -0.28
TNFAIP2-206ENST00000560428 HSPB7Q9UBY9 170 aa13.29□□□□□ -0.28
TNFAIP2-206ENST00000560428 CCDC160A6NGH7 325 aa13.28□□□□□ -0.28
TNFAIP2-206ENST00000560428 IGLC1P0CG04 106 aa13.28□□□□□ -0.28
TNFAIP2-206ENST00000560428 SMCO1Q147U7 214 aa13.28□□□□□ -0.28
TNFAIP2-206ENST00000560428 TIGITQ495A1 244 aa13.28□□□□□ -0.28
TNFAIP2-206ENST00000560428 PRSS54Q6PEW0 395 aa13.28□□□□□ -0.28
TNFAIP2-206ENST00000560428 TMEM170AQ8WVE7 144 aa13.28□□□□□ -0.28
TNFAIP2-206ENST00000560428 NARS2Q96I59 477 aaKnown RBP13.28□□□□□ -0.28
TNFAIP2-206ENST00000560428 RBM38Q9H0Z9 239 aaKnown RBP13.28□□□□□ -0.28
TNFAIP2-206ENST00000560428 DUXBA0A1W2PPF3 345 aa13.27□□□□□ -0.29
TNFAIP2-206ENST00000560428 ZNF701M0R085 212 aaPredicted RBP13.27□□□□□ -0.29
TNFAIP2-206ENST00000560428 DNASE2O00115 360 aaPredicted RBP13.27□□□□□ -0.29
TNFAIP2-206ENST00000560428 RND2P52198 227 aa13.27□□□□□ -0.29
TNFAIP2-206ENST00000560428 YPEL3P61236 119 aaPredicted RBP13.27□□□□□ -0.29
TNFAIP2-206ENST00000560428 ZNF79Q15937 498 aa13.27□□□□□ -0.29
TNFAIP2-206ENST00000560428 TMEM128Q5BJH2 165 aa13.27□□□□□ -0.29
TNFAIP2-206ENST00000560428 LYZL2Q7Z4W2 148 aa13.27□□□□□ -0.29
TNFAIP2-206ENST00000560428 CCDC190Q86UF4 302 aa13.27□□□□□ -0.29
TNFAIP2-206ENST00000560428 U3KQ87 197 aa13.27□□□□□ -0.29
TNFAIP2-206ENST00000560428 DNAH1Q9P2D7 4330 aa13.27□□□□□ -0.29
TNFAIP2-206ENST00000560428 IGHV3-66A0A0C4DH42 116 aa13.26□□□□□ -0.29
TNFAIP2-206ENST00000560428 JTBO76095 146 aa13.26□□□□□ -0.29
TNFAIP2-206ENST00000560428 NXPH3O95157 252 aa13.26□□□□□ -0.29
TNFAIP2-206ENST00000560428 ATF4P18848 351 aaPredicted RBP13.26□□□□□ -0.29
TNFAIP2-206ENST00000560428 OR10J1P30954 320 aa13.26□□□□□ -0.29
TNFAIP2-206ENST00000560428 ATP5IP56385 69 aaPredicted RBP13.26□□□□□ -0.29
TNFAIP2-206ENST00000560428 RPL11P62913 178 aaKnown RBP13.26□□□□□ -0.29
TNFAIP2-206ENST00000560428 ZNF124Q15973 351 aa13.26□□□□□ -0.29
TNFAIP2-206ENST00000560428 LYG2Q86SG7 212 aa13.26□□□□□ -0.29
TNFAIP2-206ENST00000560428 DTD1Q8TEA8 209 aa13.26□□□□□ -0.29
TNFAIP2-206ENST00000560428 Q8WTZ3 238 aa13.26□□□□□ -0.29
TNFAIP2-206ENST00000560428 GRAMD2BQ96HH9 432 aa13.26□□□□□ -0.29
TNFAIP2-206ENST00000560428 SLC25A21Q9BQT8 299 aaPredicted RBP13.26□□□□□ -0.29
TNFAIP2-206ENST00000560428 CSTL1Q9H114 145 aa13.26□□□□□ -0.29
TNFAIP2-206ENST00000560428 A0A0J9YWU9 116 aa13.25□□□□□ -0.29
TNFAIP2-206ENST00000560428 MPTX1A8MV57 137 aa13.25□□□□□ -0.29
TNFAIP2-206ENST00000560428 IFNA10P01566 189 aa13.25□□□□□ -0.29
TNFAIP2-206ENST00000560428 P2RY1P47900 373 aa13.25□□□□□ -0.29
TNFAIP2-206ENST00000560428 TMED4Q7Z7H5 227 aa13.25□□□□□ -0.29
TNFAIP2-206ENST00000560428 RBKSQ9H477 322 aa13.25□□□□□ -0.29
TNFAIP2-206ENST00000560428 LRTM2Q8N967 370 aa13.24□□□□□ -0.29
TNFAIP2-206ENST00000560428 OR1S1Q8NH92 325 aa13.24□□□□□ -0.29
TNFAIP2-206ENST00000560428 GATAD1Q8WUU5 269 aa13.24□□□□□ -0.29
TNFAIP2-206ENST00000560428 RABAC1Q9UI14 185 aa13.24□□□□□ -0.29
TNFAIP2-206ENST00000560428 U3KQE9 123 aa13.24□□□□□ -0.29
TNFAIP2-206ENST00000560428 K7EQG2 157 aa13.23□□□□□ -0.29
TNFAIP2-206ENST00000560428 HNRNPCP07910 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
TNFAIP2-206ENST00000560428 SLC25A6P12236 298 aa13.23□□□□□ -0.29
TNFAIP2-206ENST00000560428 EIF2B2P49770 351 aaKnown RBP13.23□□□□□ -0.29
TNFAIP2-206ENST00000560428 DEFB131AP59861 70 aa13.23□□□□□ -0.29
TNFAIP2-206ENST00000560428 SPANXN2Q5MJ10 180 aa13.23□□□□□ -0.29
TNFAIP2-206ENST00000560428 TMEM217Q8N7C4 229 aa13.23□□□□□ -0.29
TNFAIP2-206ENST00000560428 NPIPB3Q92617 1050 aa13.23□□□□□ -0.29
TNFAIP2-206ENST00000560428 HELTA6NFD8 242 aa13.22□□□□□ -0.29
TNFAIP2-206ENST00000560428 PITX3O75364 302 aa13.22□□□□□ -0.29
TNFAIP2-206ENST00000560428 TOMM40O96008 361 aa13.22□□□□□ -0.29
TNFAIP2-206ENST00000560428 RBMS2Q15434 407 aaKnown RBP13.22□□□□□ -0.29
TNFAIP2-206ENST00000560428 FAM24BQ8N5W8 94 aa13.22□□□□□ -0.29
TNFAIP2-206ENST00000560428 STXBP6Q8NFX7 210 aa13.22□□□□□ -0.29
TNFAIP2-206ENST00000560428 ACY3Q96HD9 319 aa13.22□□□□□ -0.29
TNFAIP2-206ENST00000560428 FAM90A26D6RGX4 464 aa13.21□□□□□ -0.29
TNFAIP2-206ENST00000560428 IL4P05112 153 aa13.21□□□□□ -0.29
TNFAIP2-206ENST00000560428 VAMP1P23763 118 aa13.21□□□□□ -0.29
TNFAIP2-206ENST00000560428 AP2S1P53680 142 aaPredicted RBP13.21□□□□□ -0.29
TNFAIP2-206ENST00000560428 USF2Q15853 346 aaPredicted RBP13.21□□□□□ -0.29
TNFAIP2-206ENST00000560428 LEMD1Q68G75 181 aa13.21□□□□□ -0.29
TNFAIP2-206ENST00000560428 C16orf54Q6UWD8 224 aa13.21□□□□□ -0.29
TNFAIP2-206ENST00000560428 DCANP1Q8TF63 244 aa13.21□□□□□ -0.29
TNFAIP2-206ENST00000560428 GLMPQ8WWB7 406 aa13.21□□□□□ -0.29
TNFAIP2-206ENST00000560428 SRRQ9GZT4 340 aa13.21□□□□□ -0.29
TNFAIP2-206ENST00000560428 TMED3Q9Y3Q3 217 aa13.21□□□□□ -0.29
TNFAIP2-206ENST00000560428 CXorf65A6NEN9 183 aa13.2□□□□□ -0.3
TNFAIP2-206ENST00000560428 NUPR2A6NF83 97 aa13.2□□□□□ -0.3
TNFAIP2-206ENST00000560428 SFT2D2O95562 160 aa13.2□□□□□ -0.3
TNFAIP2-206ENST00000560428 IFNA4P05014 189 aa13.2□□□□□ -0.3
TNFAIP2-206ENST00000560428 RD3LP0DJH9 198 aa13.2□□□□□ -0.3
TNFAIP2-206ENST00000560428 GPX4P36969 197 aaPredicted RBP13.2□□□□□ -0.3
TNFAIP2-206ENST00000560428 EWSR1Q01844 656 aaKnown RBP eCLIP13.2□□□□□ -0.3
TNFAIP2-206ENST00000560428 CENPSQ8N2Z9 138 aa13.2□□□□□ -0.3
TNFAIP2-206ENST00000560428 ALMS1Q8TCU4 4167 aa13.19□□□□□ -0.3
TNFAIP2-206ENST00000560428 CA1P00915 261 aaPredicted RBP13.19□□□□□ -0.3
TNFAIP2-206ENST00000560428 UBE2MP61081 183 aaKnown RBP13.19□□□□□ -0.3
TNFAIP2-206ENST00000560428 PPP1R1AQ13522 171 aa13.19□□□□□ -0.3
TNFAIP2-206ENST00000560428 STHQ8IWL8 128 aa13.19□□□□□ -0.3
TNFAIP2-206ENST00000560428 RARRES2Q99969 163 aa13.19□□□□□ -0.3
TNFAIP2-206ENST00000560428 PLECQ15149 4684 aaKnown RBP13.18□□□□□ -0.3
TNFAIP2-206ENST00000560428 NAP1L6A6NFF2 107 aa13.18□□□□□ -0.3
TNFAIP2-206ENST00000560428 MED6O75586 246 aa13.18□□□□□ -0.3
TNFAIP2-206ENST00000560428 PSG1P11464 419 aa13.18□□□□□ -0.3
TNFAIP2-206ENST00000560428 NUP62P37198 522 aaPredicted RBP13.18□□□□□ -0.3
TNFAIP2-206ENST00000560428 DHRS2Q13268 280 aa13.18□□□□□ -0.3
TNFAIP2-206ENST00000560428 GAMTQ14353 236 aa13.18□□□□□ -0.3
TNFAIP2-206ENST00000560428 TMEM41BQ5BJD5 291 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms