RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 OR2J3O76001 311 aa8.75□□□□□ -1.01
CARMIL3-202ENST00000559694 TRGV3P03979 118 aa8.75□□□□□ -1.01
CARMIL3-202ENST00000559694 ATP5G3P48201 142 aa8.75□□□□□ -1.01
CARMIL3-202ENST00000559694 MFAP4P55083 255 aa8.75□□□□□ -1.01
CARMIL3-202ENST00000559694 QRFPP83859 136 aa8.75□□□□□ -1.01
CARMIL3-202ENST00000559694 NPFFR1Q9GZQ6 430 aa8.75□□□□□ -1.01
CARMIL3-202ENST00000559694 LAMTOR2Q9Y2Q5 125 aa8.75□□□□□ -1.01
CARMIL3-202ENST00000559694 EML6Q6ZMW3 1958 aa8.75□□□□□ -1.01
CARMIL3-202ENST00000559694 LINC01356Q8N9X3 169 aa8.75□□□□□ -1.01
CARMIL3-202ENST00000559694 SLC25A33Q9BSK2 321 aa8.75□□□□□ -1.01
CARMIL3-202ENST00000559694 JMJD1CQ15652 2540 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 A6NDN8 102 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 MSMBP08118 114 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 HIST1H1EP10412 219 aaKnown RBP8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 CRYBB3P26998 211 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 DUX4L9Q6RFH8 374 aaPredicted RBP8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 ASCL4Q6XD76 172 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 TMEM219Q86XT9 240 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 NBR2O15453 112 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 P01737 135 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 DUTP33316 252 aaKnown RBP8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 C1orf194Q5T5A4 169 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 PET117Q6UWS5 81 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 NPCDR1Q9BY65 106 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 LINC00527Q9UJ94 153 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 MYO9AB2RTY4 2548 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 COMPP49747 757 aaPredicted RBP8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 TCTAP57738 103 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 ATP5G2Q06055 141 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 C10orf113Q5VZT2 155 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 SLC25A34Q6PIV7 304 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 PPP1R27Q86WC6 154 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 NPIPB3Q92617 1050 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 TMEM208Q9BTX3 173 aa8.74□□□□□ -1.01
CARMIL3-202ENST00000559694 RAMP3O60896 148 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 SAA1P0DJI8 122 aaPredicted RBP8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 CD33P20138 364 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 FAM19A2Q8N3H0 131 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 GBGT1Q8N5D6 347 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 C11orf44Q8N8P7 122 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 TNFRSF14Q92956 283 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 PGPEP1LA6NFU8 196 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 HYPMO75409 117 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 LINC00869P0C866 280 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 DLX1P56177 255 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 TFF3Q07654 80 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 Q71RC1 249 aaPredicted RBP8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 ERASQ7Z444 233 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 NHLRC2Q8NBF2 726 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 ALKBH7Q9BT30 221 aaPredicted RBP8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 CLEC5AQ9NY25 188 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 USP9XQ93008 2570 aaPredicted RBP8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 H3BUX3 64 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 LEPROTL1O95214 131 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 ADMP35318 185 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 CDPF1Q6NVV7 123 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 MBD3L1Q8WWY6 194 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 HSPB8Q9UJY1 196 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 PRTN3P24158 256 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 TMEM256Q8N2U0 113 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 ZNF843Q8N446 348 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 Q8TCH9 128 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 GATAD1Q8WUU5 269 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 ARPC1AQ92747 370 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 JMJD8Q96S16 334 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 IL36BQ9NZH7 164 aa8.73□□□□□ -1.01
CARMIL3-202ENST00000559694 NUP210LQ5VU65 1888 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 TRBV9A0A0B4J1U6 114 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 DNLZQ5SXM8 178 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 SPSB3Q6PJ21 355 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 OR8A1Q8NGG7 326 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 PRSS22Q9GZN4 317 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 NRN1Q9NPD7 142 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 IGHV3OR16-13A0A075B7E8 117 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 IGHV3-74A0A0B4J1X5 117 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 CA2P00918 260 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 IGHV3-23P01764 117 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 AMY1AP04745 511 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 FAM106AQ4KMX7 169 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 ARL6IP6Q8N6S5 226 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 SCO2A0A1W2PP80 73 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 M0R1W7 72 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 NPFFO15130 113 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 ZNF207O43670 478 aaKnown RBP8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 IGHV3-11P01762 117 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 CD55P08174 381 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 SELENOTP62341 195 aa8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 SRSF12Q8WXF0 261 aaKnown RBP8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 TNRC6AQ8NDV7 1962 aaKnown RBP8.72□□□□□ -1.01
CARMIL3-202ENST00000559694 TRAV1-1A0A0B4J248 108 aa8.71□□□□□ -1.01
CARMIL3-202ENST00000559694 SH2D7A6NKC9 451 aaPredicted RBP8.71□□□□□ -1.01
CARMIL3-202ENST00000559694 LINC00205P59089 165 aa8.71□□□□□ -1.01
CARMIL3-202ENST00000559694 FBXL19-AS1Q494R0 122 aa8.71□□□□□ -1.01
CARMIL3-202ENST00000559694 CENPWQ5EE01 88 aa8.71□□□□□ -1.01
CARMIL3-202ENST00000559694 ST6GALNAC6Q969X2 333 aa8.71□□□□□ -1.01
CARMIL3-202ENST00000559694 SNHG12Q9BXW3 62 aa8.71□□□□□ -1.01
CARMIL3-202ENST00000559694 FBXL7Q9UJT9 491 aa8.71□□□□□ -1.01
CARMIL3-202ENST00000559694 DOCK11Q5JSL3 2073 aa8.71□□□□□ -1.01
CARMIL3-202ENST00000559694 S100A4P26447 101 aaKnown RBP8.71□□□□□ -1.01
CARMIL3-202ENST00000559694 CFHR2P36980 270 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms