RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 AMMECR1Q9Y4X0 333 aaPredicted RBP8.83□□□□□ -1
SPG11-217ENST00000559511 DMRT1Q9Y5R6 373 aa8.83□□□□□ -1
SPG11-217ENST00000559511 LY96Q9Y6Y9 160 aa8.83□□□□□ -1
SPG11-217ENST00000559511 ACACBO00763 2458 aa8.83□□□□□ -1
SPG11-217ENST00000559511 ABCA1O95477 2261 aa8.83□□□□□ -1
SPG11-217ENST00000559511 CFAP46Q8IYW2 2715 aa8.83□□□□□ -1
SPG11-217ENST00000559511 IGHV3-21A0A0B4J1V1 117 aa8.83□□□□□ -1
SPG11-217ENST00000559511 A0A1W2PRE2 83 aa8.83□□□□□ -1
SPG11-217ENST00000559511 TEX22C9J3V5 150 aa8.83□□□□□ -1
SPG11-217ENST00000559511 SLC17A3O00476 420 aa8.83□□□□□ -1
SPG11-217ENST00000559511 FCN1O00602 326 aa8.83□□□□□ -1
SPG11-217ENST00000559511 FABP1P07148 127 aa8.83□□□□□ -1
SPG11-217ENST00000559511 GNG4P50150 75 aa8.83□□□□□ -1
SPG11-217ENST00000559511 ARF6P62330 175 aa8.83□□□□□ -1
SPG11-217ENST00000559511 SUMO1P63165 101 aaKnown RBP8.83□□□□□ -1
SPG11-217ENST00000559511 TMEM183AQ8IXX5 376 aa8.83□□□□□ -1
SPG11-217ENST00000559511 PFDN5Q99471 154 aa8.83□□□□□ -1
SPG11-217ENST00000559511 XKRY2A2RUG3 117 aa8.82□□□□□ -1
SPG11-217ENST00000559511 TIMM23O14925 209 aa8.82□□□□□ -1
SPG11-217ENST00000559511 SELENOTP62341 195 aa8.82□□□□□ -1
SPG11-217ENST00000559511 OR1L4Q8NGR5 311 aa8.82□□□□□ -1
SPG11-217ENST00000559511 OR1P1Q8NH06 330 aa8.82□□□□□ -1
SPG11-217ENST00000559511 TIMD4Q96H15 378 aa8.82□□□□□ -1
SPG11-217ENST00000559511 HIST1H2BLQ99880 126 aa8.82□□□□□ -1
SPG11-217ENST00000559511 OR51M1Q9H341 326 aa8.82□□□□□ -1
SPG11-217ENST00000559511 TNFRSF19Q9NS68 423 aa8.82□□□□□ -1
SPG11-217ENST00000559511 CDKN1AP38936 164 aa8.81□□□□□ -1
SPG11-217ENST00000559511 BPIFB3P59826 476 aa8.81□□□□□ -1
SPG11-217ENST00000559511 KLRD1Q13241 179 aa8.81□□□□□ -1
SPG11-217ENST00000559511 COA6Q5JTJ3 125 aaKnown RBP8.81□□□□□ -1
SPG11-217ENST00000559511 TPTE2P1Q5T6R2 138 aa8.81□□□□□ -1
SPG11-217ENST00000559511 ETFRF1Q6IPR1 90 aa8.81□□□□□ -1
SPG11-217ENST00000559511 LINC00305Q7Z4B0 112 aa8.81□□□□□ -1
SPG11-217ENST00000559511 LHFPL4Q7Z7J7 247 aa8.81□□□□□ -1
SPG11-217ENST00000559511 MRPL41Q8IXM3 137 aaKnown RBP8.81□□□□□ -1
SPG11-217ENST00000559511 UBTD1Q9HAC8 227 aa8.81□□□□□ -1
SPG11-217ENST00000559511 NDUFS7O75251 213 aa8.81□□□□□ -1
SPG11-217ENST00000559511 IGLV2-8P01709 118 aa8.81□□□□□ -1
SPG11-217ENST00000559511 SNRPCP09234 159 aaKnown RBP8.81□□□□□ -1
SPG11-217ENST00000559511 ERVFC1-1P60608 527 aa8.81□□□□□ -1
SPG11-217ENST00000559511 TMEM116Q8NCL8 245 aa8.81□□□□□ -1
SPG11-217ENST00000559511 SRSF12Q8WXF0 261 aaKnown RBP8.81□□□□□ -1
SPG11-217ENST00000559511 FXYD5Q96DB9 178 aa8.81□□□□□ -1
SPG11-217ENST00000559511 PAXXQ9BUH6 204 aa8.81□□□□□ -1
SPG11-217ENST00000559511 SSBP3Q9BWW4 388 aaPredicted RBP8.81□□□□□ -1
SPG11-217ENST00000559511 GSX1Q9H4S2 264 aaPredicted RBP8.81□□□□□ -1
SPG11-217ENST00000559511 IL36BQ9NZH7 164 aa8.81□□□□□ -1
SPG11-217ENST00000559511 HILPDAQ9Y5L2 63 aa8.81□□□□□ -1
SPG11-217ENST00000559511 TRAPPC1Q9Y5R8 145 aa8.81□□□□□ -1
SPG11-217ENST00000559511 F11RQ9Y624 299 aaKnown RBP8.81□□□□□ -1
SPG11-217ENST00000559511 LINC00587B1AMM8 73 aa8.8□□□□□ -1
SPG11-217ENST00000559511 ORM2P19652 201 aa8.8□□□□□ -1
SPG11-217ENST00000559511 HTR1DP28221 377 aa8.8□□□□□ -1
SPG11-217ENST00000559511 PDLIM4P50479 330 aa8.8□□□□□ -1
SPG11-217ENST00000559511 FBLN7Q53RD9 439 aa8.8□□□□□ -1
SPG11-217ENST00000559511 ARL6IP6Q8N6S5 226 aa8.8□□□□□ -1
SPG11-217ENST00000559511 OR11H6Q8NGC7 330 aa8.8□□□□□ -1
SPG11-217ENST00000559511 OR1B1Q8NGR6 318 aa8.8□□□□□ -1
SPG11-217ENST00000559511 IGF2BP2-AS1Q96M15 143 aa8.8□□□□□ -1
SPG11-217ENST00000559511 LINC00479Q96M42 142 aa8.8□□□□□ -1
SPG11-217ENST00000559511 PACRGQ96M98 296 aaPredicted RBP8.8□□□□□ -1
SPG11-217ENST00000559511 TRGV9Q99603 122 aa8.8□□□□□ -1
SPG11-217ENST00000559511 V9GYV3 84 aa8.8□□□□□ -1
SPG11-217ENST00000559511 VPS13CQ709C8 3753 aa8.8□□□□□ -1
SPG11-217ENST00000559511 WNK2Q9Y3S1 2297 aa8.8□□□□□ -1
SPG11-217ENST00000559511 LOC105371242A0A075B767 164 aa8.8□□□□□ -1
SPG11-217ENST00000559511 A6NNC1 897 aa8.8□□□□□ -1
SPG11-217ENST00000559511 AMBPP02760 352 aa8.8□□□□□ -1
SPG11-217ENST00000559511 PLGLAQ15195 96 aa8.8□□□□□ -1
SPG11-217ENST00000559511 CFHR4Q92496 578 aa8.8□□□□□ -1
SPG11-217ENST00000559511 BTF3L4Q96K17 158 aa8.8□□□□□ -1
SPG11-217ENST00000559511 RNASE7Q9H1E1 156 aaKnown RBP8.8□□□□□ -1
SPG11-217ENST00000559511 CD24P25063 80 aa8.79□□□□□ -1
SPG11-217ENST00000559511 PAX2Q02962 417 aa8.79□□□□□ -1
SPG11-217ENST00000559511 MMDQ15546 238 aa8.79□□□□□ -1
SPG11-217ENST00000559511 ZNF329Q86UD4 541 aa8.79□□□□□ -1
SPG11-217ENST00000559511 C22orf15Q8WYQ4 148 aa8.79□□□□□ -1
SPG11-217ENST00000559511 RNF5Q99942 180 aa8.79□□□□□ -1
SPG11-217ENST00000559511 DPM3Q9P2X0 92 aa8.79□□□□□ -1
SPG11-217ENST00000559511 USP24Q9UPU5 2620 aa8.79□□□□□ -1
SPG11-217ENST00000559511 A0A1W2PRD5 423 aa8.78□□□□□ -1
SPG11-217ENST00000559511 A0A1W2PRF3 423 aa8.78□□□□□ -1
SPG11-217ENST00000559511 A0A1W2PRM7 423 aa8.78□□□□□ -1
SPG11-217ENST00000559511 ODF3BA8MYP8 253 aa8.78□□□□□ -1
SPG11-217ENST00000559511 M0R1W7 72 aa8.78□□□□□ -1
SPG11-217ENST00000559511 CORTO00230 105 aa8.78□□□□□ -1
SPG11-217ENST00000559511 GCGP01275 180 aa8.78□□□□□ -1
SPG11-217ENST00000559511 FRMD6-AS1P0C7T7 363 aa8.78□□□□□ -1
SPG11-217ENST00000559511 CNN1P51911 297 aaKnown RBP8.78□□□□□ -1
SPG11-217ENST00000559511 TIGITQ495A1 244 aa8.78□□□□□ -1
SPG11-217ENST00000559511 NHLRC2Q8NBF2 726 aa8.78□□□□□ -1
SPG11-217ENST00000559511 SVIPQ8NHG7 77 aa8.78□□□□□ -1
SPG11-217ENST00000559511 CACNA1BQ00975 2339 aa8.78□□□□□ -1
SPG11-217ENST00000559511 AKAP6Q13023 2319 aa8.78□□□□□ -1
SPG11-217ENST00000559511 ZFHX3Q15911 3703 aa8.78□□□□□ -1
SPG11-217ENST00000559511 I3L2K1 104 aa8.78□□□□□ -1
SPG11-217ENST00000559511 CBLN1P23435 193 aa8.78□□□□□ -1
SPG11-217ENST00000559511 PRTN3P24158 256 aa8.78□□□□□ -1
SPG11-217ENST00000559511 YPEL3P61236 119 aaPredicted RBP8.78□□□□□ -1
SPG11-217ENST00000559511 FXYD3Q14802 87 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms