RNA–Protein interactions for RNA: ENST00000559340.1

LDLR-210, Transcript of low density lipoprotein receptor, humanhuman

TSL 5

Gene LDLR, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-210ENST00000559340 PMS2P5A8MQ11 134 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 NDUFA4O00483 81 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 WIPF1O43516 503 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 IGHV3-48P01763 117 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 CTSGP08311 255 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 OR10J1P30954 320 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 HOXD3P31249 432 aaPredicted RBP7.11□□□□□ -1.27
LDLR-210ENST00000559340 AP2S1P53680 142 aaPredicted RBP7.11□□□□□ -1.27
LDLR-210ENST00000559340 YPEL3P61236 119 aaPredicted RBP7.11□□□□□ -1.27
LDLR-210ENST00000559340 EWSR1Q01844 656 aaKnown RBP eCLIP7.11□□□□□ -1.27
LDLR-210ENST00000559340 FHL3Q13643 280 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 ZNF600Q6ZNG1 722 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 ACOT7LQ6ZUV0 252 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 S100A7AQ86SG5 101 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 C1QL4Q86Z23 238 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 TMEM217Q8N7C4 229 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 TRGV9Q99603 122 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 GINS3Q9BRX5 216 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 TMEM147Q9BVK8 224 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 GPR61Q9BZJ8 451 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 UQCC1Q9NVA1 299 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 PFDN2Q9UHV9 154 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 HSPB11Q9Y547 144 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 NOTCH3Q9UM47 2321 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 ANK2Q01484 3957 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 TRAV14DV4A0A0A6YYC5 116 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 PRSS46E5RG02 174 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 PPP5D1E7EU14 171 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 LGALS9O00182 355 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 BMPR1BO00238 502 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 OVOL1O14753 267 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 MPDU1O75352 247 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 OR2C1O95371 312 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 IFNA5P01569 189 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 CD33P20138 364 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 BMI1P35226 326 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 ELLP55199 621 aaPredicted RBP7.1□□□□□ -1.27
LDLR-210ENST00000559340 SELENOTP62341 195 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 NHLH2Q02577 135 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 KLF5Q13887 457 aaPredicted RBP7.1□□□□□ -1.27
LDLR-210ENST00000559340 DEFB136Q30KP8 78 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 TEPPQ6URK8 271 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 TCTE3Q8IZS6 198 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 THAP8Q8NA92 274 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 SCGB1C1Q8TD33 95 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 AQP10Q96PS8 301 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 UFC1Q9Y3C8 167 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 TENM1Q9UKZ4 2725 aa7.1□□□□□ -1.27
LDLR-210ENST00000559340 ZNF320A2RRD8 509 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 HMSDA8MTL9 139 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 F8W735 103 aaPredicted RBP7.09□□□□□ -1.27
LDLR-210ENST00000559340 K7EMT4 169 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 TAAR5O14804 337 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 YIF1AO95070 293 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 TOMM40O96008 361 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 TRBV12-3P01733 135 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 IGLC1P0CG04 106 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 RD3LP0DJH9 198 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 SLURP1P55000 103 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 ARL16Q0P5N6 197 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 OR2F1Q13607 317 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 TIGITQ495A1 244 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 HIST2H2BDQ6DRA6 164 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 REC114Q7Z4M0 266 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 HAPLN4Q86UW8 402 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 ZNF709Q8N972 641 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 BPIFCQ8NFQ6 507 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 OR5C1Q8NGR4 320 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 MARC2Q969Z3 335 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 NARS2Q96I59 477 aaKnown RBP7.09□□□□□ -1.27
LDLR-210ENST00000559340 ST6GAL2Q96JF0 529 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 HYLS1Q96M11 299 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 DUX3Q96PT4 197 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 CHRDL1Q9BU40 450 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 MFFQ9GZY8 342 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 KCNIP2Q9NS61 270 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 ZMAT5Q9UDW3 170 aaKnown RBP7.09□□□□□ -1.27
LDLR-210ENST00000559340 TNFSF18Q9UNG2 199 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 RNF24Q9Y225 148 aa7.09□□□□□ -1.27
LDLR-210ENST00000559340 BORCS7-ASMTA0A0B4J1R7 106 aa7.08□□□□□ -1.28
LDLR-210ENST00000559340 A0A0D9SG52 128 aa7.08□□□□□ -1.28
LDLR-210ENST00000559340 A0A1W2PS18 150 aa7.08□□□□□ -1.28
LDLR-210ENST00000559340 C17orf112F2Z3M2 114 aa7.08□□□□□ -1.28
LDLR-210ENST00000559340 C4BPBP20851 252 aa7.08□□□□□ -1.28
LDLR-210ENST00000559340 ADMP35318 185 aa7.08□□□□□ -1.28
LDLR-210ENST00000559340 INSL3P51460 131 aa7.08□□□□□ -1.28
LDLR-210ENST00000559340 SYNJ2BPP57105 145 aa7.08□□□□□ -1.28
LDLR-210ENST00000559340 ZNF266Q14584 549 aa7.08□□□□□ -1.28
LDLR-210ENST00000559340 VWC2Q2TAL6 325 aa7.08□□□□□ -1.28
LDLR-210ENST00000559340 Q5BKY6 102 aa7.08□□□□□ -1.28
LDLR-210ENST00000559340 PRR31Q5SQ13 230 aa7.08□□□□□ -1.28
LDLR-210ENST00000559340 PXDC1Q5TGL8 231 aa7.08□□□□□ -1.28
LDLR-210ENST00000559340 TREML4Q6UXN2 200 aa7.08□□□□□ -1.28
LDLR-210ENST00000559340 LINC00482Q8N8I6 264 aa7.08□□□□□ -1.28
LDLR-210ENST00000559340 WFDC9Q8NEX5 89 aa7.08□□□□□ -1.28
LDLR-210ENST00000559340 OR51G1Q8NGK1 321 aa7.08□□□□□ -1.28
LDLR-210ENST00000559340 DLX4Q92988 240 aaPredicted RBP7.08□□□□□ -1.28
LDLR-210ENST00000559340 RCC1LQ96I51 464 aaKnown RBP7.08□□□□□ -1.28
LDLR-210ENST00000559340 ATP5SQ99766 215 aa7.08□□□□□ -1.28
LDLR-210ENST00000559340 C20orf24Q9BUV8 137 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms