RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 PRR20CP86479 221 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 PRR20DP86480 221 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 PRR20BP86481 221 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 PRR20AP86496 221 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 ADIRFQ15847 76 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 STPG3Q8N7X2 389 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 SSMEM1Q8WWF3 244 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 FLYWCH2Q96CP2 140 aaKnown RBP12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 NDUFA4L2Q9NRX3 87 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 TRBV24-1A0A075B6N3 115 aa12.59□□□□□ -0.39
CDC42BPB-204ENST00000559043 OOSP1A8MZH6 123 aa12.59□□□□□ -0.39
CDC42BPB-204ENST00000559043 VENTXO95231 258 aa12.59□□□□□ -0.39
CDC42BPB-204ENST00000559043 FABP9Q0Z7S8 132 aa12.59□□□□□ -0.39
CDC42BPB-204ENST00000559043 TEX29Q8N6K0 151 aa12.59□□□□□ -0.39
CDC42BPB-204ENST00000559043 OR4C13Q8NGP0 309 aa12.59□□□□□ -0.39
CDC42BPB-204ENST00000559043 OR4A5Q8NH83 315 aa12.59□□□□□ -0.39
CDC42BPB-204ENST00000559043 ABHD5Q8WTS1 349 aa12.59□□□□□ -0.39
CDC42BPB-204ENST00000559043 SSX3Q99909 188 aa12.59□□□□□ -0.39
CDC42BPB-204ENST00000559043 TXNDC17Q9BRA2 123 aa12.59□□□□□ -0.39
CDC42BPB-204ENST00000559043 ARL14EPLP0DKL9 152 aa12.58□□□□□ -0.4
CDC42BPB-204ENST00000559043 RNASE2P10153 161 aaKnown RBP12.58□□□□□ -0.4
CDC42BPB-204ENST00000559043 SRD5A1P18405 259 aa12.58□□□□□ -0.4
CDC42BPB-204ENST00000559043 Q6YL49 198 aa12.58□□□□□ -0.4
CDC42BPB-204ENST00000559043 TMEM144Q7Z5S9 345 aa12.58□□□□□ -0.4
CDC42BPB-204ENST00000559043 SIGLECL1Q8N7X8 197 aa12.58□□□□□ -0.4
CDC42BPB-204ENST00000559043 TMEM167AQ8TBQ9 72 aa12.58□□□□□ -0.4
CDC42BPB-204ENST00000559043 FAM210BQ96KR6 192 aa12.58□□□□□ -0.4
CDC42BPB-204ENST00000559043 TNCP24821 2201 aa12.58□□□□□ -0.4
CDC42BPB-204ENST00000559043 CRLF1O75462 422 aa12.58□□□□□ -0.4
CDC42BPB-204ENST00000559043 IGHV4-59P01825 116 aa12.58□□□□□ -0.4
CDC42BPB-204ENST00000559043 LINC00869P0C866 280 aa12.58□□□□□ -0.4
CDC42BPB-204ENST00000559043 RPL8P62917 257 aaKnown RBP12.58□□□□□ -0.4
CDC42BPB-204ENST00000559043 CCDC144NLQ6NUI1 221 aa12.58□□□□□ -0.4
CDC42BPB-204ENST00000559043 C12orf57Q99622 126 aa12.58□□□□□ -0.4
CDC42BPB-204ENST00000559043 SLC45A2Q9UMX9 530 aa12.58□□□□□ -0.4
CDC42BPB-204ENST00000559043 F6UZH7 168 aa12.57□□□□□ -0.4
CDC42BPB-204ENST00000559043 TGOLN2O43493 480 aa12.57□□□□□ -0.4
CDC42BPB-204ENST00000559043 S100A8P05109 93 aa12.57□□□□□ -0.4
CDC42BPB-204ENST00000559043 IER3P46695 156 aa12.57□□□□□ -0.4
CDC42BPB-204ENST00000559043 ATP5G3P48201 142 aa12.57□□□□□ -0.4
CDC42BPB-204ENST00000559043 MEOX2P50222 304 aa12.57□□□□□ -0.4
CDC42BPB-204ENST00000559043 RHOBP62745 196 aa12.57□□□□□ -0.4
CDC42BPB-204ENST00000559043 GNB1P62873 340 aa12.57□□□□□ -0.4
CDC42BPB-204ENST00000559043 KIAA0141Q14154 515 aaPredicted RBP12.57□□□□□ -0.4
CDC42BPB-204ENST00000559043 C16orf82Q7Z2V1 217 aa12.57□□□□□ -0.4
CDC42BPB-204ENST00000559043 VSTM2AQ8TAG5 236 aa12.57□□□□□ -0.4
CDC42BPB-204ENST00000559043 COMMD5Q9GZQ3 224 aa12.57□□□□□ -0.4
CDC42BPB-204ENST00000559043 SEPSECSQ9HD40 501 aaKnown RBP12.57□□□□□ -0.4
CDC42BPB-204ENST00000559043 WASHC3Q9Y3C0 194 aa12.57□□□□□ -0.4
CDC42BPB-204ENST00000559043 NF1P21359 2839 aa12.56□□□□□ -0.4
CDC42BPB-204ENST00000559043 H3BUX3 64 aa12.56□□□□□ -0.4
CDC42BPB-204ENST00000559043 IGLV2-23P01705 113 aa12.56□□□□□ -0.4
CDC42BPB-204ENST00000559043 PFN1P07737 140 aaKnown RBP12.56□□□□□ -0.4
CDC42BPB-204ENST00000559043 UBE2G2P60604 165 aa12.56□□□□□ -0.4
CDC42BPB-204ENST00000559043 OR10W1Q8NGF6 305 aa12.56□□□□□ -0.4
CDC42BPB-204ENST00000559043 PYGO2Q9BRQ0 406 aa12.56□□□□□ -0.4
CDC42BPB-204ENST00000559043 DOK5Q9P104 306 aa12.56□□□□□ -0.4
CDC42BPB-204ENST00000559043 MC5RP33032 325 aa12.56□□□□□ -0.4
CDC42BPB-204ENST00000559043 GAMTQ14353 236 aa12.56□□□□□ -0.4
CDC42BPB-204ENST00000559043 CST9LP1Q5W188 147 aa12.56□□□□□ -0.4
CDC42BPB-204ENST00000559043 OR51G1Q8NGK1 321 aa12.56□□□□□ -0.4
CDC42BPB-204ENST00000559043 ANAPC16Q96DE5 110 aa12.56□□□□□ -0.4
CDC42BPB-204ENST00000559043 EAF1Q96JC9 268 aaPredicted RBP12.56□□□□□ -0.4
CDC42BPB-204ENST00000559043 DUX5Q96PT3 197 aa12.56□□□□□ -0.4
CDC42BPB-204ENST00000559043 ESM1Q9NQ30 184 aa12.56□□□□□ -0.4
CDC42BPB-204ENST00000559043 IGKV1OR2-108A0A075B7D4 117 aa12.55□□□□□ -0.4
CDC42BPB-204ENST00000559043 HOXA3O43365 443 aaPredicted RBP12.55□□□□□ -0.4
CDC42BPB-204ENST00000559043 CNTFRP26992 372 aa12.55□□□□□ -0.4
CDC42BPB-204ENST00000559043 GCHFRP30047 84 aa12.55□□□□□ -0.4
CDC42BPB-204ENST00000559043 CD69Q07108 199 aa12.55□□□□□ -0.4
CDC42BPB-204ENST00000559043 EBI3Q14213 229 aa12.55□□□□□ -0.4
CDC42BPB-204ENST00000559043 TNFRSF19Q9NS68 423 aa12.55□□□□□ -0.4
CDC42BPB-204ENST00000559043 A0A1W2PN81 502 aa12.54□□□□□ -0.4
CDC42BPB-204ENST00000559043 CGB1A6NKQ9 187 aa12.54□□□□□ -0.4
CDC42BPB-204ENST00000559043 E7EUB6 86 aa12.54□□□□□ -0.4
CDC42BPB-204ENST00000559043 CLN5O75503 358 aa12.54□□□□□ -0.4
CDC42BPB-204ENST00000559043 TRGC2P03986 189 aa12.54□□□□□ -0.4
CDC42BPB-204ENST00000559043 CHRNA7P36544 502 aa12.54□□□□□ -0.4
CDC42BPB-204ENST00000559043 ERHP84090 104 aaKnown RBP12.54□□□□□ -0.4
CDC42BPB-204ENST00000559043 LY6EQ16553 131 aa12.54□□□□□ -0.4
CDC42BPB-204ENST00000559043 SPATA31B1PQ5VZV4 182 aa12.54□□□□□ -0.4
CDC42BPB-204ENST00000559043 TMEM219Q86XT9 240 aa12.54□□□□□ -0.4
CDC42BPB-204ENST00000559043 Q8N6K4 173 aa12.54□□□□□ -0.4
CDC42BPB-204ENST00000559043 CACNG8Q8WXS5 425 aa12.54□□□□□ -0.4
CDC42BPB-204ENST00000559043 SLC35E1Q96K37 410 aa12.54□□□□□ -0.4
CDC42BPB-204ENST00000559043 PHOX2AO14813 284 aa12.54□□□□□ -0.4
CDC42BPB-204ENST00000559043 HOXA5P20719 270 aa12.54□□□□□ -0.4
CDC42BPB-204ENST00000559043 BRS3P32247 399 aa12.54□□□□□ -0.4
CDC42BPB-204ENST00000559043 GPX4P36969 197 aaPredicted RBP12.54□□□□□ -0.4
CDC42BPB-204ENST00000559043 TCEAL7Q9BRU2 100 aa12.54□□□□□ -0.4
CDC42BPB-204ENST00000559043 H7BYZ3 331 aa12.53□□□□□ -0.4
CDC42BPB-204ENST00000559043 HIST1H2BKO60814 126 aa12.53□□□□□ -0.4
CDC42BPB-204ENST00000559043 NDUFB4O95168 129 aa12.53□□□□□ -0.4
CDC42BPB-204ENST00000559043 HIST1H2BJP06899 126 aa12.53□□□□□ -0.4
CDC42BPB-204ENST00000559043 SMIM6P0DI80 62 aa12.53□□□□□ -0.4
CDC42BPB-204ENST00000559043 HIST1H2BOP23527 126 aa12.53□□□□□ -0.4
CDC42BPB-204ENST00000559043 HIST1H2BBP33778 126 aa12.53□□□□□ -0.4
CDC42BPB-204ENST00000559043 HIST1H2BDP58876 126 aa12.53□□□□□ -0.4
CDC42BPB-204ENST00000559043 HIST1H2BCP62807 126 aa12.53□□□□□ -0.4
CDC42BPB-204ENST00000559043 HIST2H2BEQ16778 126 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms