RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 OR1S2Q8NGQ3 325 aa11.1□□□□□ -0.63
SMAD6-203ENST00000558937 RNASEH2CQ8TDP1 164 aaKnown RBP11.1□□□□□ -0.63
SMAD6-203ENST00000558937 SCGB3A2Q96PL1 93 aa11.1□□□□□ -0.63
SMAD6-203ENST00000558937 RABAC1Q9UI14 185 aa11.1□□□□□ -0.63
SMAD6-203ENST00000558937 KCNIP3Q9Y2W7 256 aa11.1□□□□□ -0.63
SMAD6-203ENST00000558937 IGLC1P0CG04 106 aa11.09□□□□□ -0.63
SMAD6-203ENST00000558937 SLC25A4P12235 298 aa11.09□□□□□ -0.63
SMAD6-203ENST00000558937 ATF4P18848 351 aaPredicted RBP11.09□□□□□ -0.63
SMAD6-203ENST00000558937 NPY1RP25929 384 aa11.09□□□□□ -0.63
SMAD6-203ENST00000558937 P2RY1P47900 373 aa11.09□□□□□ -0.63
SMAD6-203ENST00000558937 SUPT4H1P63272 117 aaKnown RBP11.09□□□□□ -0.63
SMAD6-203ENST00000558937 LEMD1Q68G75 181 aa11.09□□□□□ -0.63
SMAD6-203ENST00000558937 STXBP6Q8NFX7 210 aa11.09□□□□□ -0.63
SMAD6-203ENST00000558937 A0A0B4J2A0 478 aa11.08□□□□□ -0.64
SMAD6-203ENST00000558937 NUPR2A6NF83 97 aa11.08□□□□□ -0.64
SMAD6-203ENST00000558937 K7EQG2 157 aa11.08□□□□□ -0.64
SMAD6-203ENST00000558937 AKR1C4P17516 323 aa11.08□□□□□ -0.64
SMAD6-203ENST00000558937 RBMS2Q15434 407 aaKnown RBP11.08□□□□□ -0.64
SMAD6-203ENST00000558937 NMSQ5H8A3 153 aa11.08□□□□□ -0.64
SMAD6-203ENST00000558937 GATAD1Q8WUU5 269 aa11.08□□□□□ -0.64
SMAD6-203ENST00000558937 TRIM63Q969Q1 353 aa11.08□□□□□ -0.64
SMAD6-203ENST00000558937 NARS2Q96I59 477 aaKnown RBP11.08□□□□□ -0.64
SMAD6-203ENST00000558937 SHPKQ9UHJ6 478 aa11.08□□□□□ -0.64
SMAD6-203ENST00000558937 CA1P00915 261 aaPredicted RBP11.07□□□□□ -0.64
SMAD6-203ENST00000558937 OR10J1P30954 320 aa11.07□□□□□ -0.64
SMAD6-203ENST00000558937 CCR6P51684 374 aa11.07□□□□□ -0.64
SMAD6-203ENST00000558937 YPEL3P61236 119 aaPredicted RBP11.07□□□□□ -0.64
SMAD6-203ENST00000558937 KLF9Q13886 244 aaPredicted RBP11.07□□□□□ -0.64
SMAD6-203ENST00000558937 ETFRF1Q6IPR1 90 aa11.07□□□□□ -0.64
SMAD6-203ENST00000558937 LYZL2Q7Z4W2 148 aa11.07□□□□□ -0.64
SMAD6-203ENST00000558937 TMEM217Q8N7C4 229 aa11.07□□□□□ -0.64
SMAD6-203ENST00000558937 LINC00476Q8WZB0 136 aa11.07□□□□□ -0.64
SMAD6-203ENST00000558937 GRAMD2BQ96HH9 432 aa11.07□□□□□ -0.64
SMAD6-203ENST00000558937 HSPB7Q9UBY9 170 aa11.07□□□□□ -0.64
SMAD6-203ENST00000558937 CACFD1Q9UGQ2 172 aa11.07□□□□□ -0.64
SMAD6-203ENST00000558937 U3KQE9 123 aa11.07□□□□□ -0.64
SMAD6-203ENST00000558937 AGRNO00468 2067 aa11.06□□□□□ -0.64
SMAD6-203ENST00000558937 HNRNPCP07910 306 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMAD6-203ENST00000558937 FAUP35544 74 aaKnown RBP11.06□□□□□ -0.64
SMAD6-203ENST00000558937 SMCO1Q147U7 214 aa11.06□□□□□ -0.64
SMAD6-203ENST00000558937 CEMP1Q6PRD7 247 aaPredicted RBP11.06□□□□□ -0.64
SMAD6-203ENST00000558937 NOXA1Q86UR1 476 aa11.06□□□□□ -0.64
SMAD6-203ENST00000558937 LGI3Q8N145 548 aa11.06□□□□□ -0.64
SMAD6-203ENST00000558937 Q8WTZ3 238 aa11.06□□□□□ -0.64
SMAD6-203ENST00000558937 NPIPB3Q92617 1050 aa11.06□□□□□ -0.64
SMAD6-203ENST00000558937 ACY3Q96HD9 319 aa11.06□□□□□ -0.64
SMAD6-203ENST00000558937 RARRES2Q99969 163 aa11.06□□□□□ -0.64
SMAD6-203ENST00000558937 RBKSQ9H477 322 aa11.06□□□□□ -0.64
SMAD6-203ENST00000558937 V9GYH0 126 aa11.06□□□□□ -0.64
SMAD6-203ENST00000558937 IFNA10P01566 189 aa11.05□□□□□ -0.64
SMAD6-203ENST00000558937 IL4P05112 153 aa11.05□□□□□ -0.64
SMAD6-203ENST00000558937 ZNF688P0C7X2 276 aa11.05□□□□□ -0.64
SMAD6-203ENST00000558937 ANXA3P12429 323 aa11.05□□□□□ -0.64
SMAD6-203ENST00000558937 SRPXP78539 464 aa11.05□□□□□ -0.64
SMAD6-203ENST00000558937 USF2Q15853 346 aaPredicted RBP11.05□□□□□ -0.64
SMAD6-203ENST00000558937 PYDC2Q56P42 97 aa11.05□□□□□ -0.64
SMAD6-203ENST00000558937 STHQ8IWL8 128 aa11.05□□□□□ -0.64
SMAD6-203ENST00000558937 OR11H2Q8NH07 326 aa11.05□□□□□ -0.64
SMAD6-203ENST00000558937 DTD1Q8TEA8 209 aa11.05□□□□□ -0.64
SMAD6-203ENST00000558937 DCANP1Q8TF63 244 aa11.05□□□□□ -0.64
SMAD6-203ENST00000558937 GLMPQ8WWB7 406 aa11.05□□□□□ -0.64
SMAD6-203ENST00000558937 PLECQ15149 4684 aaKnown RBP11.05□□□□□ -0.64
SMAD6-203ENST00000558937 HELTA6NFD8 242 aa11.04□□□□□ -0.64
SMAD6-203ENST00000558937 TOMM40O96008 361 aa11.04□□□□□ -0.64
SMAD6-203ENST00000558937 ZNF79Q15937 498 aa11.04□□□□□ -0.64
SMAD6-203ENST00000558937 C16orf54Q6UWD8 224 aa11.04□□□□□ -0.64
SMAD6-203ENST00000558937 TMED4Q7Z7H5 227 aa11.04□□□□□ -0.64
SMAD6-203ENST00000558937 TRPT1Q86TN4 253 aaKnown RBP11.04□□□□□ -0.64
SMAD6-203ENST00000558937 TOMM5Q8N4H5 51 aa11.04□□□□□ -0.64
SMAD6-203ENST00000558937 OR1S1Q8NH92 325 aa11.04□□□□□ -0.64
SMAD6-203ENST00000558937 C11orf68Q9H3H3 251 aaKnown RBP11.04□□□□□ -0.64
SMAD6-203ENST00000558937 U3KQ87 197 aa11.04□□□□□ -0.64
SMAD6-203ENST00000558937 CCDC160A6NGH7 325 aa11.03□□□□□ -0.64
SMAD6-203ENST00000558937 KNCNA6PVL3 124 aa11.03□□□□□ -0.64
SMAD6-203ENST00000558937 EIF2B2P49770 351 aaKnown RBP11.03□□□□□ -0.64
SMAD6-203ENST00000558937 AP3S2P59780 193 aa11.03□□□□□ -0.64
SMAD6-203ENST00000558937 DHRS2Q13268 280 aa11.03□□□□□ -0.64
SMAD6-203ENST00000558937 KLK5Q9Y337 293 aaPredicted RBP11.03□□□□□ -0.64
SMAD6-203ENST00000558937 DUXBA0A1W2PPF3 345 aa11.02□□□□□ -0.65
SMAD6-203ENST00000558937 LY6G6CO95867 125 aa11.02□□□□□ -0.65
SMAD6-203ENST00000558937 RD3LP0DJH9 198 aa11.02□□□□□ -0.65
SMAD6-203ENST00000558937 TMEM128Q5BJH2 165 aa11.02□□□□□ -0.65
SMAD6-203ENST00000558937 PHLDA1Q8WV24 401 aaPredicted RBP11.02□□□□□ -0.65
SMAD6-203ENST00000558937 HYDINQ4G0P3 5121 aa11.02□□□□□ -0.65
SMAD6-203ENST00000558937 DEFB4AO15263 64 aa11.01□□□□□ -0.65
SMAD6-203ENST00000558937 PITX3O75364 302 aa11.01□□□□□ -0.65
SMAD6-203ENST00000558937 IFNA4P05014 189 aa11.01□□□□□ -0.65
SMAD6-203ENST00000558937 GIG44P09565 113 aaPredicted RBP11.01□□□□□ -0.65
SMAD6-203ENST00000558937 PSG1P11464 419 aa11.01□□□□□ -0.65
SMAD6-203ENST00000558937 C4BPBP20851 252 aa11.01□□□□□ -0.65
SMAD6-203ENST00000558937 VAMP1P23763 118 aa11.01□□□□□ -0.65
SMAD6-203ENST00000558937 S100A5P33763 92 aa11.01□□□□□ -0.65
SMAD6-203ENST00000558937 NANOS2P60321 138 aaKnown RBP11.01□□□□□ -0.65
SMAD6-203ENST00000558937 CCDC190Q86UF4 302 aa11.01□□□□□ -0.65
SMAD6-203ENST00000558937 OR51G1Q8NGK1 321 aa11.01□□□□□ -0.65
SMAD6-203ENST00000558937 SLC35E1Q96K37 410 aa11.01□□□□□ -0.65
SMAD6-203ENST00000558937 RBM38Q9H0Z9 239 aaKnown RBP11.01□□□□□ -0.65
SMAD6-203ENST00000558937 PIGBOS1A0A0B4J2F0 54 aa11□□□□□ -0.65
SMAD6-203ENST00000558937 BUB3O43684 328 aa11□□□□□ -0.65
SMAD6-203ENST00000558937 SPP1P10451 314 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms