RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 TOMM20LQ6UXN7 152 aa11.36□□□□□ -0.59
RPL28-206ENST00000558752 LINC00299Q6ZSB3 139 aa11.36□□□□□ -0.59
RPL28-206ENST00000558752 Q6ZWC4 215 aa11.36□□□□□ -0.59
RPL28-206ENST00000558752 CENPSQ8N2Z9 138 aa11.36□□□□□ -0.59
RPL28-206ENST00000558752 SLC24A4Q8NFF2 622 aa11.36□□□□□ -0.59
RPL28-206ENST00000558752 RHPN1-AS1Q9BWJ2 59 aa11.36□□□□□ -0.59
RPL28-206ENST00000558752 TMEM231Q9H6L2 316 aa11.36□□□□□ -0.59
RPL28-206ENST00000558752 FAM90A26D6RGX4 464 aa11.35□□□□□ -0.59
RPL28-206ENST00000558752 CHEK1O14757 476 aa11.35□□□□□ -0.59
RPL28-206ENST00000558752 SPRY2O43597 315 aa11.35□□□□□ -0.59
RPL28-206ENST00000558752 ATF4P18848 351 aaPredicted RBP11.35□□□□□ -0.59
RPL28-206ENST00000558752 VAMP1P23763 118 aa11.35□□□□□ -0.59
RPL28-206ENST00000558752 NPY1RP25929 384 aa11.35□□□□□ -0.59
RPL28-206ENST00000558752 PAFAH1B2P68402 229 aa11.35□□□□□ -0.59
RPL28-206ENST00000558752 CEMP1Q6PRD7 247 aaPredicted RBP11.35□□□□□ -0.59
RPL28-206ENST00000558752 OR1S1Q8NH92 325 aa11.35□□□□□ -0.59
RPL28-206ENST00000558752 FNDC4Q9H6D8 234 aaPredicted RBP11.35□□□□□ -0.59
RPL28-206ENST00000558752 A0A1W2PS18 150 aa11.34□□□□□ -0.59
RPL28-206ENST00000558752 PITX3O75364 302 aa11.34□□□□□ -0.59
RPL28-206ENST00000558752 MED6O75586 246 aa11.34□□□□□ -0.59
RPL28-206ENST00000558752 NDUFB6O95139 128 aa11.34□□□□□ -0.59
RPL28-206ENST00000558752 IFNA10P01566 189 aa11.34□□□□□ -0.59
RPL28-206ENST00000558752 NPPCP23582 126 aa11.34□□□□□ -0.59
RPL28-206ENST00000558752 MLANAQ16655 118 aa11.34□□□□□ -0.59
RPL28-206ENST00000558752 LYG2Q86SG7 212 aa11.34□□□□□ -0.59
RPL28-206ENST00000558752 STPG3Q8N7X2 389 aa11.34□□□□□ -0.59
RPL28-206ENST00000558752 OR1S2Q8NGQ3 325 aa11.34□□□□□ -0.59
RPL28-206ENST00000558752 DTD1Q8TEA8 209 aa11.34□□□□□ -0.59
RPL28-206ENST00000558752 ZNF414Q96IQ9 312 aa11.34□□□□□ -0.59
RPL28-206ENST00000558752 PUS1Q9Y606 427 aaKnown RBP eCLIP11.34□□□□□ -0.59
RPL28-206ENST00000558752 PCLOQ9Y6V0 5065 aa11.33□□□□□ -0.6
RPL28-206ENST00000558752 A0A0J9YWU9 116 aa11.33□□□□□ -0.6
RPL28-206ENST00000558752 ZNF207O43670 478 aaKnown RBP11.33□□□□□ -0.6
RPL28-206ENST00000558752 GPX4P36969 197 aaPredicted RBP11.33□□□□□ -0.6
RPL28-206ENST00000558752 YPEL3P61236 119 aaPredicted RBP11.33□□□□□ -0.6
RPL28-206ENST00000558752 RPP30P78346 268 aaKnown RBP11.33□□□□□ -0.6
RPL28-206ENST00000558752 PRSS54Q6PEW0 395 aa11.33□□□□□ -0.6
RPL28-206ENST00000558752 Q8WTZ3 238 aa11.33□□□□□ -0.6
RPL28-206ENST00000558752 NARS2Q96I59 477 aaKnown RBP11.33□□□□□ -0.6
RPL28-206ENST00000558752 RNF2Q99496 336 aa11.33□□□□□ -0.6
RPL28-206ENST00000558752 RBKSQ9H477 322 aa11.33□□□□□ -0.6
RPL28-206ENST00000558752 VSIRQ9H7M9 311 aa11.33□□□□□ -0.6
RPL28-206ENST00000558752 PRR13Q9NZ81 148 aa11.33□□□□□ -0.6
RPL28-206ENST00000558752 IGHV3OR16-8A0A075B7F1 116 aa11.32□□□□□ -0.6
RPL28-206ENST00000558752 KIR2DL5BA0A0G2JN68 375 aa11.32□□□□□ -0.6
RPL28-206ENST00000558752 KIR2DL5BA0A0G2JPC4 375 aa11.32□□□□□ -0.6
RPL28-206ENST00000558752 PPP1R1AQ13522 171 aa11.32□□□□□ -0.6
RPL28-206ENST00000558752 FAM90A2PQ658T7 463 aa11.32□□□□□ -0.6
RPL28-206ENST00000558752 KIR2DL5AQ8N109 375 aa11.32□□□□□ -0.6
RPL28-206ENST00000558752 KIR2DL5BQ8NHK3 375 aa11.32□□□□□ -0.6
RPL28-206ENST00000558752 CIB3Q96Q77 187 aaPredicted RBP11.32□□□□□ -0.6
RPL28-206ENST00000558752 METTL26Q96S19 204 aa11.32□□□□□ -0.6
RPL28-206ENST00000558752 SDHCQ99643 169 aaPredicted RBP11.32□□□□□ -0.6
RPL28-206ENST00000558752 TRAV2A0A0B4J234 112 aa11.31□□□□□ -0.6
RPL28-206ENST00000558752 C9orf170A2RU37 121 aa11.31□□□□□ -0.6
RPL28-206ENST00000558752 IGKV1-17P01599 117 aa11.31□□□□□ -0.6
RPL28-206ENST00000558752 IFNA4P05014 189 aa11.31□□□□□ -0.6
RPL28-206ENST00000558752 IL7P13232 177 aa11.31□□□□□ -0.6
RPL28-206ENST00000558752 RAB11AP62491 216 aa11.31□□□□□ -0.6
RPL28-206ENST00000558752 COQ8AQ8NI60 647 aa11.31□□□□□ -0.6
RPL28-206ENST00000558752 ZFAND3Q9H8U3 227 aa11.31□□□□□ -0.6
RPL28-206ENST00000558752 SELENOKQ9Y6D0 94 aa11.31□□□□□ -0.6
RPL28-206ENST00000558752 DNAH10Q8IVF4 4471 aa11.3□□□□□ -0.6
RPL28-206ENST00000558752 IGLC1P0CG04 106 aa11.3□□□□□ -0.6
RPL28-206ENST00000558752 CRYBB3P26998 211 aa11.3□□□□□ -0.6
RPL28-206ENST00000558752 OR10J1P30954 320 aa11.3□□□□□ -0.6
RPL28-206ENST00000558752 TMEM170AQ8WVE7 144 aa11.3□□□□□ -0.6
RPL28-206ENST00000558752 NPIPB3Q92617 1050 aa11.3□□□□□ -0.6
RPL28-206ENST00000558752 MRPL36Q9P0J6 103 aaKnown RBP11.3□□□□□ -0.6
RPL28-206ENST00000558752 DFFBO76075 338 aa11.29□□□□□ -0.6
RPL28-206ENST00000558752 NXPH3O95157 252 aa11.29□□□□□ -0.6
RPL28-206ENST00000558752 IFNA21P01568 189 aa11.29□□□□□ -0.6
RPL28-206ENST00000558752 OR4E1P0C645 316 aa11.29□□□□□ -0.6
RPL28-206ENST00000558752 RD3LP0DJH9 198 aa11.29□□□□□ -0.6
RPL28-206ENST00000558752 EIF2B2P49770 351 aaKnown RBP11.29□□□□□ -0.6
RPL28-206ENST00000558752 RND2P52198 227 aa11.29□□□□□ -0.6
RPL28-206ENST00000558752 DEFB135Q30KP9 77 aa11.29□□□□□ -0.6
RPL28-206ENST00000558752 TIGITQ495A1 244 aa11.29□□□□□ -0.6
RPL28-206ENST00000558752 TCF24Q7RTU0 167 aa11.29□□□□□ -0.6
RPL28-206ENST00000558752 RNF183Q96D59 192 aa11.29□□□□□ -0.6
RPL28-206ENST00000558752 GRAMD2BQ96HH9 432 aa11.29□□□□□ -0.6
RPL28-206ENST00000558752 CCDC32Q9BV29 185 aa11.29□□□□□ -0.6
RPL28-206ENST00000558752 PFDN2Q9UHV9 154 aa11.29□□□□□ -0.6
RPL28-206ENST00000558752 LINC00854A0A1B0GVQ3 168 aa11.28□□□□□ -0.6
RPL28-206ENST00000558752 DNASE2O00115 360 aaPredicted RBP11.28□□□□□ -0.6
RPL28-206ENST00000558752 SYNGR2O43760 224 aa11.28□□□□□ -0.6
RPL28-206ENST00000558752 FABP1P07148 127 aa11.28□□□□□ -0.6
RPL28-206ENST00000558752 HOXB5P09067 269 aa11.28□□□□□ -0.6
RPL28-206ENST00000558752 AP2S1P53680 142 aaPredicted RBP11.28□□□□□ -0.6
RPL28-206ENST00000558752 GGNBP1Q5YKI7 109 aa11.28□□□□□ -0.6
RPL28-206ENST00000558752 LGALS9CQ6DKI2 356 aa11.28□□□□□ -0.6
RPL28-206ENST00000558752 S100ZQ8WXG8 99 aa11.28□□□□□ -0.6
RPL28-206ENST00000558752 ST8SIA2Q92186 375 aa11.28□□□□□ -0.6
RPL28-206ENST00000558752 IGHV3-49A0A0A0MS15 119 aa11.27□□□□□ -0.61
RPL28-206ENST00000558752 TOMM40O96008 361 aa11.27□□□□□ -0.61
RPL28-206ENST00000558752 RPL11P62913 178 aaKnown RBP11.27□□□□□ -0.61
RPL28-206ENST00000558752 ID3Q02535 119 aa11.27□□□□□ -0.61
RPL28-206ENST00000558752 DHRS2Q13268 280 aa11.27□□□□□ -0.61
RPL28-206ENST00000558752 C4orf46Q504U0 113 aa11.27□□□□□ -0.61
RPL28-206ENST00000558752 ACY3Q96HD9 319 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms