RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 SRPXP78539 464 aa11.48□□□□□ -0.57
CSHL1-208ENST00000558609 Q6ZWC4 215 aa11.48□□□□□ -0.57
CSHL1-208ENST00000558609 TCF24Q7RTU0 167 aa11.48□□□□□ -0.57
CSHL1-208ENST00000558609 KIR2DL5AQ8N109 375 aa11.48□□□□□ -0.57
CSHL1-208ENST00000558609 LGI3Q8N145 548 aa11.48□□□□□ -0.57
CSHL1-208ENST00000558609 SLC24A4Q8NFF2 622 aa11.48□□□□□ -0.57
CSHL1-208ENST00000558609 KIR2DL5BQ8NHK3 375 aa11.48□□□□□ -0.57
CSHL1-208ENST00000558609 ST8SIA2Q92186 375 aa11.48□□□□□ -0.57
CSHL1-208ENST00000558609 SDHCQ99643 169 aaPredicted RBP11.48□□□□□ -0.57
CSHL1-208ENST00000558609 TP53TG1Q9Y2A0 90 aa11.48□□□□□ -0.57
CSHL1-208ENST00000558609 PIGBOS1A0A0B4J2F0 54 aa11.47□□□□□ -0.57
CSHL1-208ENST00000558609 SLC25A4P12235 298 aa11.47□□□□□ -0.57
CSHL1-208ENST00000558609 NPPCP23582 126 aa11.47□□□□□ -0.57
CSHL1-208ENST00000558609 PAFAH1B2P68402 229 aa11.47□□□□□ -0.57
CSHL1-208ENST00000558609 IFITM3Q01628 133 aa11.47□□□□□ -0.57
CSHL1-208ENST00000558609 TNFRSF9Q07011 255 aa11.47□□□□□ -0.57
CSHL1-208ENST00000558609 SMCO1Q147U7 214 aa11.47□□□□□ -0.57
CSHL1-208ENST00000558609 TMEM128Q5BJH2 165 aa11.47□□□□□ -0.57
CSHL1-208ENST00000558609 MZT2BQ6NZ67 158 aa11.47□□□□□ -0.57
CSHL1-208ENST00000558609 PRSS54Q6PEW0 395 aa11.47□□□□□ -0.57
CSHL1-208ENST00000558609 LYZL2Q7Z4W2 148 aa11.47□□□□□ -0.57
CSHL1-208ENST00000558609 NOXA1Q86UR1 476 aa11.47□□□□□ -0.57
CSHL1-208ENST00000558609 LILRB2Q8N423 598 aa11.47□□□□□ -0.57
CSHL1-208ENST00000558609 TMEM170AQ8WVE7 144 aa11.47□□□□□ -0.57
CSHL1-208ENST00000558609 HSPB7Q9UBY9 170 aa11.47□□□□□ -0.57
CSHL1-208ENST00000558609 IGKV3-7A0A075B6H7 116 aa11.46□□□□□ -0.57
CSHL1-208ENST00000558609 LCE6AA0A183 80 aa11.46□□□□□ -0.57
CSHL1-208ENST00000558609 A0A1W2PS18 150 aa11.46□□□□□ -0.57
CSHL1-208ENST00000558609 NPY1RP25929 384 aa11.46□□□□□ -0.57
CSHL1-208ENST00000558609 CRYBB3P26998 211 aa11.46□□□□□ -0.57
CSHL1-208ENST00000558609 TFPI2P48307 235 aa11.46□□□□□ -0.57
CSHL1-208ENST00000558609 TIGITQ495A1 244 aa11.46□□□□□ -0.57
CSHL1-208ENST00000558609 WFDC3Q8IUB2 231 aa11.46□□□□□ -0.57
CSHL1-208ENST00000558609 GBGT1Q8N5D6 347 aa11.46□□□□□ -0.57
CSHL1-208ENST00000558609 STPG3Q8N7X2 389 aa11.46□□□□□ -0.57
CSHL1-208ENST00000558609 SLC25A21Q9BQT8 299 aaPredicted RBP11.46□□□□□ -0.57
CSHL1-208ENST00000558609 TMEM231Q9H6L2 316 aa11.46□□□□□ -0.57
CSHL1-208ENST00000558609 U3KQ87 197 aa11.46□□□□□ -0.57
CSHL1-208ENST00000558609 TRAV2A0A0B4J234 112 aa11.45□□□□□ -0.58
CSHL1-208ENST00000558609 DUXBA0A1W2PPF3 345 aa11.45□□□□□ -0.58
CSHL1-208ENST00000558609 SPRY2O43597 315 aa11.45□□□□□ -0.58
CSHL1-208ENST00000558609 DFFBO76075 338 aa11.45□□□□□ -0.58
CSHL1-208ENST00000558609 NXPH3O95157 252 aa11.45□□□□□ -0.58
CSHL1-208ENST00000558609 IGLC1P0CG04 106 aa11.45□□□□□ -0.58
CSHL1-208ENST00000558609 RND2P52198 227 aa11.45□□□□□ -0.58
CSHL1-208ENST00000558609 YPEL3P61236 119 aaPredicted RBP11.45□□□□□ -0.58
CSHL1-208ENST00000558609 ETFRF1Q6IPR1 90 aa11.45□□□□□ -0.58
CSHL1-208ENST00000558609 TMED4Q7Z7H5 227 aa11.45□□□□□ -0.58
CSHL1-208ENST00000558609 APRG1Q8IVJ8 170 aa11.45□□□□□ -0.58
CSHL1-208ENST00000558609 OR1S2Q8NGQ3 325 aa11.45□□□□□ -0.58
CSHL1-208ENST00000558609 METTL26Q96S19 204 aa11.45□□□□□ -0.58
CSHL1-208ENST00000558609 KRTAP17-1Q9BYP8 105 aa11.45□□□□□ -0.58
CSHL1-208ENST00000558609 MS4A6AQ9H2W1 248 aa11.45□□□□□ -0.58
CSHL1-208ENST00000558609 MAP6D1Q9H9H5 199 aa11.45□□□□□ -0.58
CSHL1-208ENST00000558609 IGHV3-66A0A0C4DH42 116 aa11.44□□□□□ -0.58
CSHL1-208ENST00000558609 RPL35AP18077 110 aaKnown RBP11.44□□□□□ -0.58
CSHL1-208ENST00000558609 OR10J1P30954 320 aa11.44□□□□□ -0.58
CSHL1-208ENST00000558609 ATP5IP56385 69 aaPredicted RBP11.44□□□□□ -0.58
CSHL1-208ENST00000558609 LRTM2Q8N967 370 aa11.44□□□□□ -0.58
CSHL1-208ENST00000558609 DTD1Q8TEA8 209 aa11.44□□□□□ -0.58
CSHL1-208ENST00000558609 RNF183Q96D59 192 aa11.44□□□□□ -0.58
CSHL1-208ENST00000558609 RBKSQ9H477 322 aa11.44□□□□□ -0.58
CSHL1-208ENST00000558609 DNASE2O00115 360 aaPredicted RBP11.43□□□□□ -0.58
CSHL1-208ENST00000558609 PITX3O75364 302 aa11.43□□□□□ -0.58
CSHL1-208ENST00000558609 IFNA10P01566 189 aa11.43□□□□□ -0.58
CSHL1-208ENST00000558609 RPL11P62913 178 aaKnown RBP11.43□□□□□ -0.58
CSHL1-208ENST00000558609 ZNF124Q15973 351 aa11.43□□□□□ -0.58
CSHL1-208ENST00000558609 DEFB135Q30KP9 77 aa11.43□□□□□ -0.58
CSHL1-208ENST00000558609 OR1S1Q8NH92 325 aa11.43□□□□□ -0.58
CSHL1-208ENST00000558609 ENKURQ8TC29 256 aa11.43□□□□□ -0.58
CSHL1-208ENST00000558609 Q8WTZ3 238 aa11.43□□□□□ -0.58
CSHL1-208ENST00000558609 NPIPB3Q92617 1050 aa11.43□□□□□ -0.58
CSHL1-208ENST00000558609 NARS2Q96I59 477 aaKnown RBP11.43□□□□□ -0.58
CSHL1-208ENST00000558609 U3KQE9 123 aa11.43□□□□□ -0.58
CSHL1-208ENST00000558609 LYRM1O43325 122 aa11.42□□□□□ -0.58
CSHL1-208ENST00000558609 PTTG1O95997 202 aa11.42□□□□□ -0.58
CSHL1-208ENST00000558609 SLC25A6P12236 298 aa11.42□□□□□ -0.58
CSHL1-208ENST00000558609 VAMP1P23763 118 aa11.42□□□□□ -0.58
CSHL1-208ENST00000558609 P2RY1P47900 373 aa11.42□□□□□ -0.58
CSHL1-208ENST00000558609 ASAH1Q13510 395 aa11.42□□□□□ -0.58
CSHL1-208ENST00000558609 CENPSQ8N2Z9 138 aa11.42□□□□□ -0.58
CSHL1-208ENST00000558609 C7orf50Q9BRJ6 194 aaKnown RBP11.42□□□□□ -0.58
CSHL1-208ENST00000558609 CSTL1Q9H114 145 aa11.42□□□□□ -0.58
CSHL1-208ENST00000558609 FAM240BA0A1B0GVZ2 78 aa11.41□□□□□ -0.58
CSHL1-208ENST00000558609 SFT2D2O95562 160 aa11.41□□□□□ -0.58
CSHL1-208ENST00000558609 PPP1R1AQ13522 171 aa11.41□□□□□ -0.58
CSHL1-208ENST00000558609 RBMS2Q15434 407 aaKnown RBP11.41□□□□□ -0.58
CSHL1-208ENST00000558609 GRAMD2BQ96HH9 432 aa11.41□□□□□ -0.58
CSHL1-208ENST00000558609 TBC1D24Q9ULP9 559 aa11.41□□□□□ -0.58
CSHL1-208ENST00000558609 NAP1L6A6NFF2 107 aa11.4□□□□□ -0.58
CSHL1-208ENST00000558609 FAM90A26D6RGX4 464 aa11.4□□□□□ -0.58
CSHL1-208ENST00000558609 K7EQG2 157 aa11.4□□□□□ -0.58
CSHL1-208ENST00000558609 PLA2G10O15496 165 aa11.4□□□□□ -0.58
CSHL1-208ENST00000558609 TOMM40O96008 361 aa11.4□□□□□ -0.58
CSHL1-208ENST00000558609 IFNA4P05014 189 aa11.4□□□□□ -0.58
CSHL1-208ENST00000558609 HNRNPCP07910 306 aaKnown RBP eCLIP11.4□□□□□ -0.58
CSHL1-208ENST00000558609 RD3LP0DJH9 198 aa11.4□□□□□ -0.58
CSHL1-208ENST00000558609 GPX4P36969 197 aaPredicted RBP11.4□□□□□ -0.58
CSHL1-208ENST00000558609 DEFB131AP59861 70 aa11.4□□□□□ -0.58
CSHL1-208ENST00000558609 LYG2Q86SG7 212 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms