RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 BRI3O95415 125 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 IGLV1-51P01701 117 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 IFNA6P05013 189 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 CTSDP07339 412 aaPredicted RBP3.16□□□□□ -1.9
SPG11-211ENST00000558561 OR8U8P0C7N1 319 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 FOLR2P14207 255 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 GP9P14770 177 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 AKR1C4P17516 323 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 TAS2R19P59542 299 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 RND3P61587 244 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 HSPE1P61604 102 aaKnown RBP3.16□□□□□ -1.9
SPG11-211ENST00000558561 SNRPEP62304 92 aaKnown RBP3.16□□□□□ -1.9
SPG11-211ENST00000558561 GAGE2BQ13066 116 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 CATR1Q13166 79 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 TMEM187Q14656 261 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 MSMO1Q15800 293 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 DEFB114Q30KQ6 69 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 ANKRD55Q3KP44 614 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 GAGE2EQ4V326 116 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 PYDC2Q56P42 97 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 GAGE2AQ6NT46 116 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 Q6ZTC4 211 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 LYZL2Q7Z4W2 148 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 SLC38A6Q8IZM9 456 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 TCTEX1D1Q8N7M0 179 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 NECAP1Q8NC96 275 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 OR9G4Q8NGQ1 327 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 OR1L8Q8NGR8 309 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 ZNF502Q8TBZ5 544 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 AP3S1Q92572 193 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 SPIN2AQ99865 258 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 SPIN2BQ9BPZ2 258 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 SRRQ9GZT4 340 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 FNDC4Q9H6D8 234 aaPredicted RBP3.16□□□□□ -1.9
SPG11-211ENST00000558561 GAGE2DQ9UEU5 116 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 MLXQ9UH92 298 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 RSL24D1Q9UHA3 163 aaKnown RBP3.16□□□□□ -1.9
SPG11-211ENST00000558561 ZNF256Q9Y2P7 627 aaPredicted RBP3.16□□□□□ -1.9
SPG11-211ENST00000558561 IGHV3-66A0A0C4DH42 116 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 A0A0G2JLM5 398 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 ZNF320A2RRD8 509 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 TMEM213A2RRL7 107 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 RBMY1BA6NDE4 496 aaKnown RBP3.15□□□□□ -1.91
SPG11-211ENST00000558561 RBMY1EA6NEQ0 496 aaKnown RBP3.15□□□□□ -1.91
SPG11-211ENST00000558561 CRYM-AS1A6NIL9 109 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 C2orf70A6NJV1 201 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 C15orf61A6NNL5 157 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 MPTX1A8MV57 137 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 H3BUA1 57 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 I3L2K1 104 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 CDS2O95674 445 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 MT-CO2P00403 227 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 IGKV3-20P01619 116 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 CTSGP08311 255 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 RBMY1DP0C7P1 496 aaKnown RBP3.15□□□□□ -1.91
SPG11-211ENST00000558561 FRMD6-AS1P0C7T7 363 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 AKAIN1P0CW23 69 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 RNASE2P10153 161 aaKnown RBP3.15□□□□□ -1.91
SPG11-211ENST00000558561 PRB4P10163 310 aaPredicted RBP3.15□□□□□ -1.91
SPG11-211ENST00000558561 DEFA4P12838 97 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 CBLN1P23435 193 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 UCP1P25874 307 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 PTBP1P26599 531 aaKnown RBP eCLIP3.15□□□□□ -1.91
SPG11-211ENST00000558561 SLC6A1P30531 599 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 GPR183P32249 361 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 BTCP35070 178 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 MAS1LP35410 378 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 KIR2DS2P43631 304 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 UBE2MP61081 183 aaKnown RBP3.15□□□□□ -1.91
SPG11-211ENST00000558561 IFITM3Q01628 133 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 CBX3Q13185 183 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 RPEL1Q2QD12 228 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 H2BFWTQ7Z2G1 175 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 ZNF429Q86V71 674 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 CMTM1Q8IZ96 169 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 Q8N402 240 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 ARRDC1Q8N5I2 433 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 DEFB125Q8N687 156 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 GDPD1Q8N9F7 314 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 UXS1Q8NBZ7 420 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 OR52B4Q8NGK2 314 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 OR4A16Q8NH70 328 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 OR4A5Q8NH83 315 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 USMG5Q96IX5 58 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 UHRF2Q96PU4 802 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 OR4C12Q96R67 309 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 COMMD5Q9GZQ3 224 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 TMEM222Q9H0R3 208 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 NAA60Q9H7X0 242 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 RETNQ9HD89 108 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 TMEM14BQ9NUH8 114 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 MCUBQ9NWR8 336 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 COMMD9Q9P000 198 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 COPZ2Q9P299 210 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 ZNF257Q9Y2Q1 563 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 F11RQ9Y624 299 aaKnown RBP3.15□□□□□ -1.91
SPG11-211ENST00000558561 DNAH7Q8WXX0 4024 aa3.15□□□□□ -1.91
SPG11-211ENST00000558561 IGKV3-7A0A075B6H7 116 aa3.14□□□□□ -1.91
SPG11-211ENST00000558561 A0A1B0GU03 582 aa3.14□□□□□ -1.91
SPG11-211ENST00000558561 FAM223BA6NKX1 122 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms