RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 ACY3Q96HD9 319 aa8.79□□□□□ -1
HERC1-202ENST00000558324 DNAH1Q9P2D7 4330 aa8.78□□□□□ -1
HERC1-202ENST00000558324 TRAV30A0A087WSZ9 112 aa8.78□□□□□ -1
HERC1-202ENST00000558324 MPTX1A8MV57 137 aa8.78□□□□□ -1
HERC1-202ENST00000558324 IFNA10P01566 189 aa8.78□□□□□ -1
HERC1-202ENST00000558324 CD5P06127 495 aa8.78□□□□□ -1
HERC1-202ENST00000558324 IGLC1P0CG04 106 aa8.78□□□□□ -1
HERC1-202ENST00000558324 ANXA3P12429 323 aa8.78□□□□□ -1
HERC1-202ENST00000558324 OR10J1P30954 320 aa8.78□□□□□ -1
HERC1-202ENST00000558324 S100A5P33763 92 aa8.78□□□□□ -1
HERC1-202ENST00000558324 FAUP35544 74 aaKnown RBP8.78□□□□□ -1
HERC1-202ENST00000558324 P2RY1P47900 373 aa8.78□□□□□ -1
HERC1-202ENST00000558324 CMC4P56277 68 aaPredicted RBP8.78□□□□□ -1
HERC1-202ENST00000558324 KLF9Q13886 244 aaPredicted RBP8.78□□□□□ -1
HERC1-202ENST00000558324 NMSQ5H8A3 153 aa8.78□□□□□ -1
HERC1-202ENST00000558324 TOMM5Q8N4H5 51 aa8.78□□□□□ -1
HERC1-202ENST00000558324 OR1S2Q8NGQ3 325 aa8.78□□□□□ -1
HERC1-202ENST00000558324 RNASEH2CQ8TDP1 164 aaKnown RBP8.78□□□□□ -1
HERC1-202ENST00000558324 TRIM63Q969Q1 353 aa8.78□□□□□ -1
HERC1-202ENST00000558324 NARS2Q96I59 477 aaKnown RBP8.78□□□□□ -1
HERC1-202ENST00000558324 CSTL1Q9H114 145 aa8.78□□□□□ -1
HERC1-202ENST00000558324 V9GYH0 126 aa8.78□□□□□ -1
HERC1-202ENST00000558324 LYSTQ99698 3801 aa8.77□□□□□ -1
HERC1-202ENST00000558324 A0A0B4J2A0 478 aa8.77□□□□□ -1.01
HERC1-202ENST00000558324 A0A1W2PS18 150 aa8.77□□□□□ -1.01
HERC1-202ENST00000558324 SLC25A4P12235 298 aa8.77□□□□□ -1.01
HERC1-202ENST00000558324 VAMP1P23763 118 aa8.77□□□□□ -1.01
HERC1-202ENST00000558324 CRYBB3P26998 211 aa8.77□□□□□ -1.01
HERC1-202ENST00000558324 CCR6P51684 374 aa8.77□□□□□ -1.01
HERC1-202ENST00000558324 AP3S2P59780 193 aa8.77□□□□□ -1.01
HERC1-202ENST00000558324 TNFRSF9Q07011 255 aa8.77□□□□□ -1.01
HERC1-202ENST00000558324 SMCO1Q147U7 214 aa8.77□□□□□ -1.01
HERC1-202ENST00000558324 RBMS2Q15434 407 aaKnown RBP8.77□□□□□ -1.01
HERC1-202ENST00000558324 ZNF79Q15937 498 aa8.77□□□□□ -1.01
HERC1-202ENST00000558324 LGI3Q8N145 548 aa8.77□□□□□ -1.01
HERC1-202ENST00000558324 OR1S1Q8NH92 325 aa8.77□□□□□ -1.01
HERC1-202ENST00000558324 DTD1Q8TEA8 209 aa8.77□□□□□ -1.01
HERC1-202ENST00000558324 Q8WTZ3 238 aa8.77□□□□□ -1.01
HERC1-202ENST00000558324 NPIPB3Q92617 1050 aa8.77□□□□□ -1.01
HERC1-202ENST00000558324 GRAMD2BQ96HH9 432 aa8.77□□□□□ -1.01
HERC1-202ENST00000558324 RBKSQ9H477 322 aa8.77□□□□□ -1.01
HERC1-202ENST00000558324 SHPKQ9UHJ6 478 aa8.77□□□□□ -1.01
HERC1-202ENST00000558324 CA1P00915 261 aaPredicted RBP8.76□□□□□ -1.01
HERC1-202ENST00000558324 ZNF688P0C7X2 276 aa8.76□□□□□ -1.01
HERC1-202ENST00000558324 SRPXP78539 464 aa8.76□□□□□ -1.01
HERC1-202ENST00000558324 ETFRF1Q6IPR1 90 aa8.76□□□□□ -1.01
HERC1-202ENST00000558324 HSPB7Q9UBY9 170 aa8.76□□□□□ -1.01
HERC1-202ENST00000558324 TRAV2A0A0B4J234 112 aa8.75□□□□□ -1.01
HERC1-202ENST00000558324 K7EQG2 157 aa8.75□□□□□ -1.01
HERC1-202ENST00000558324 IFNA4P05014 189 aa8.75□□□□□ -1.01
HERC1-202ENST00000558324 IL4P05112 153 aa8.75□□□□□ -1.01
HERC1-202ENST00000558324 HNRNPCP07910 306 aaKnown RBP eCLIP8.75□□□□□ -1.01
HERC1-202ENST00000558324 YPEL3P61236 119 aaPredicted RBP8.75□□□□□ -1.01
HERC1-202ENST00000558324 USF2Q15853 346 aaPredicted RBP8.75□□□□□ -1.01
HERC1-202ENST00000558324 NOXA1Q86UR1 476 aa8.75□□□□□ -1.01
HERC1-202ENST00000558324 STHQ8IWL8 128 aa8.75□□□□□ -1.01
HERC1-202ENST00000558324 RARRES2Q99969 163 aa8.75□□□□□ -1.01
HERC1-202ENST00000558324 RBM38Q9H0Z9 239 aaKnown RBP8.75□□□□□ -1.01
HERC1-202ENST00000558324 CACFD1Q9UGQ2 172 aa8.75□□□□□ -1.01
HERC1-202ENST00000558324 ALMS1Q8TCU4 4167 aa8.75□□□□□ -1.01
HERC1-202ENST00000558324 HYDINQ4G0P3 5121 aa8.75□□□□□ -1.01
HERC1-202ENST00000558324 NUPR2A6NF83 97 aa8.74□□□□□ -1.01
HERC1-202ENST00000558324 KNCNA6PVL3 124 aa8.74□□□□□ -1.01
HERC1-202ENST00000558324 RD3LP0DJH9 198 aa8.74□□□□□ -1.01
HERC1-202ENST00000558324 IAPPP10997 89 aa8.74□□□□□ -1.01
HERC1-202ENST00000558324 EIF2B2P49770 351 aaKnown RBP8.74□□□□□ -1.01
HERC1-202ENST00000558324 DHRS2Q13268 280 aa8.74□□□□□ -1.01
HERC1-202ENST00000558324 TMEM128Q5BJH2 165 aa8.74□□□□□ -1.01
HERC1-202ENST00000558324 CCDC190Q86UF4 302 aa8.74□□□□□ -1.01
HERC1-202ENST00000558324 TMEM217Q8N7C4 229 aa8.74□□□□□ -1.01
HERC1-202ENST00000558324 OR11H2Q8NH07 326 aa8.74□□□□□ -1.01
HERC1-202ENST00000558324 PAIP2BQ9ULR5 123 aaKnown RBP8.74□□□□□ -1.01
HERC1-202ENST00000558324 U3KQ87 197 aa8.74□□□□□ -1.01
HERC1-202ENST00000558324 PLECQ15149 4684 aaKnown RBP8.74□□□□□ -1.01
HERC1-202ENST00000558324 HELTA6NFD8 242 aa8.73□□□□□ -1.01
HERC1-202ENST00000558324 DEFB4AO15263 64 aa8.73□□□□□ -1.01
HERC1-202ENST00000558324 TOMM40O96008 361 aa8.73□□□□□ -1.01
HERC1-202ENST00000558324 PSG1P11464 419 aa8.73□□□□□ -1.01
HERC1-202ENST00000558324 PPP1R1AQ13522 171 aa8.73□□□□□ -1.01
HERC1-202ENST00000558324 SPANXN2Q5MJ10 180 aa8.73□□□□□ -1.01
HERC1-202ENST00000558324 C16orf54Q6UWD8 224 aa8.73□□□□□ -1.01
HERC1-202ENST00000558324 OR51G1Q8NGK1 321 aa8.73□□□□□ -1.01
HERC1-202ENST00000558324 DCANP1Q8TF63 244 aa8.73□□□□□ -1.01
HERC1-202ENST00000558324 GATAD1Q8WUU5 269 aa8.73□□□□□ -1.01
HERC1-202ENST00000558324 GLMPQ8WWB7 406 aa8.73□□□□□ -1.01
HERC1-202ENST00000558324 PBDC1Q9BVG4 233 aa8.73□□□□□ -1.01
HERC1-202ENST00000558324 U3KQE9 123 aa8.73□□□□□ -1.01
HERC1-202ENST00000558324 LINC00854A0A1B0GVQ3 168 aa8.72□□□□□ -1.01
HERC1-202ENST00000558324 DUXBA0A1W2PPF3 345 aa8.72□□□□□ -1.01
HERC1-202ENST00000558324 ZFP92A6NM28 416 aa8.72□□□□□ -1.01
HERC1-202ENST00000558324 INPP1P49441 399 aa8.72□□□□□ -1.01
HERC1-202ENST00000558324 PSMG4Q5JS54 123 aa8.72□□□□□ -1.01
HERC1-202ENST00000558324 ACTL10Q5JWF8 245 aa8.72□□□□□ -1.01
HERC1-202ENST00000558324 CEMP1Q6PRD7 247 aaPredicted RBP8.72□□□□□ -1.01
HERC1-202ENST00000558324 TRPT1Q86TN4 253 aaKnown RBP8.72□□□□□ -1.01
HERC1-202ENST00000558324 CENPSQ8N2Z9 138 aa8.72□□□□□ -1.01
HERC1-202ENST00000558324 RNF125Q96EQ8 232 aa8.72□□□□□ -1.01
HERC1-202ENST00000558324 SLC35E1Q96K37 410 aa8.72□□□□□ -1.01
HERC1-202ENST00000558324 SLC25A21Q9BQT8 299 aaPredicted RBP8.72□□□□□ -1.01
HERC1-202ENST00000558324 SRRQ9GZT4 340 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms