RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 RABAC1Q9UI14 185 aa9.16□□□□□ -0.94
CDC42BPB-202ENST00000558321 A0A0B4J2A0 478 aa9.15□□□□□ -0.94
CDC42BPB-202ENST00000558321 IGKV1-17P01599 117 aa9.15□□□□□ -0.94
CDC42BPB-202ENST00000558321 VAMP1P23763 118 aa9.15□□□□□ -0.94
CDC42BPB-202ENST00000558321 OR10J1P30954 320 aa9.15□□□□□ -0.94
CDC42BPB-202ENST00000558321 TNFRSF9Q07011 255 aa9.15□□□□□ -0.94
CDC42BPB-202ENST00000558321 KLF9Q13886 244 aaPredicted RBP9.15□□□□□ -0.94
CDC42BPB-202ENST00000558321 ZNF124Q15973 351 aa9.15□□□□□ -0.94
CDC42BPB-202ENST00000558321 NMSQ5H8A3 153 aa9.15□□□□□ -0.94
CDC42BPB-202ENST00000558321 PRSS54Q6PEW0 395 aa9.15□□□□□ -0.94
CDC42BPB-202ENST00000558321 OR1S2Q8NGQ3 325 aa9.15□□□□□ -0.94
CDC42BPB-202ENST00000558321 OR1S1Q8NH92 325 aa9.15□□□□□ -0.94
CDC42BPB-202ENST00000558321 DTD1Q8TEA8 209 aa9.15□□□□□ -0.94
CDC42BPB-202ENST00000558321 ACY3Q96HD9 319 aa9.15□□□□□ -0.94
CDC42BPB-202ENST00000558321 GRAMD2BQ96HH9 432 aa9.15□□□□□ -0.94
CDC42BPB-202ENST00000558321 CSTL1Q9H114 145 aa9.15□□□□□ -0.94
CDC42BPB-202ENST00000558321 SHPKQ9UHJ6 478 aa9.15□□□□□ -0.94
CDC42BPB-202ENST00000558321 A0A0J9YWU9 116 aa9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 MPTX1A8MV57 137 aa9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 JTBO76095 146 aa9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 IFNA4P05014 189 aa9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 CRYBB3P26998 211 aa9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 P2RY1P47900 373 aa9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 INPP1P49441 399 aa9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 DEFB131AP59861 70 aa9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 TMEM128Q5BJH2 165 aa9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 SPANXN2Q5MJ10 180 aa9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 STXBP6Q8NFX7 210 aa9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 NPIPB3Q92617 1050 aa9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 TRIM63Q969Q1 353 aa9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 RNF183Q96D59 192 aa9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 SLC25A21Q9BQT8 299 aaPredicted RBP9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 RBKSQ9H477 322 aa9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 HSPB7Q9UBY9 170 aa9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 U3KQ87 197 aa9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 V9GYH0 126 aa9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 TENM2Q9NT68 2774 aa9.14□□□□□ -0.95
CDC42BPB-202ENST00000558321 TRAV2A0A0B4J234 112 aa9.13□□□□□ -0.95
CDC42BPB-202ENST00000558321 CXorf65A6NEN9 183 aa9.13□□□□□ -0.95
CDC42BPB-202ENST00000558321 IGLC1P0CG04 106 aa9.13□□□□□ -0.95
CDC42BPB-202ENST00000558321 EIF2B2P49770 351 aaKnown RBP9.13□□□□□ -0.95
CDC42BPB-202ENST00000558321 YPEL3P61236 119 aaPredicted RBP9.13□□□□□ -0.95
CDC42BPB-202ENST00000558321 RBMS2Q15434 407 aaKnown RBP9.13□□□□□ -0.95
CDC42BPB-202ENST00000558321 ZNF79Q15937 498 aa9.13□□□□□ -0.95
CDC42BPB-202ENST00000558321 LEMD1Q68G75 181 aa9.13□□□□□ -0.95
CDC42BPB-202ENST00000558321 LYG2Q86SG7 212 aa9.13□□□□□ -0.95
CDC42BPB-202ENST00000558321 RD3LP0DJH9 198 aa9.12□□□□□ -0.95
CDC42BPB-202ENST00000558321 PMS2P11Q13670 270 aa9.12□□□□□ -0.95
CDC42BPB-202ENST00000558321 CCDC190Q86UF4 302 aa9.12□□□□□ -0.95
CDC42BPB-202ENST00000558321 STHQ8IWL8 128 aa9.12□□□□□ -0.95
CDC42BPB-202ENST00000558321 TMEM217Q8N7C4 229 aa9.12□□□□□ -0.95
CDC42BPB-202ENST00000558321 TMEM170AQ8WVE7 144 aa9.12□□□□□ -0.95
CDC42BPB-202ENST00000558321 DEDD2Q8WXF8 326 aa9.12□□□□□ -0.95
CDC42BPB-202ENST00000558321 PAIP2BQ9ULR5 123 aaKnown RBP9.12□□□□□ -0.95
CDC42BPB-202ENST00000558321 DUXBA0A1W2PPF3 345 aa9.11□□□□□ -0.95
CDC42BPB-202ENST00000558321 HELTA6NFD8 242 aa9.11□□□□□ -0.95
CDC42BPB-202ENST00000558321 ZNF701M0R085 212 aaPredicted RBP9.11□□□□□ -0.95
CDC42BPB-202ENST00000558321 IL4P05112 153 aa9.11□□□□□ -0.95
CDC42BPB-202ENST00000558321 HNRNPCP07910 306 aaKnown RBP eCLIP9.11□□□□□ -0.95
CDC42BPB-202ENST00000558321 ATP5IP56385 69 aaPredicted RBP9.11□□□□□ -0.95
CDC42BPB-202ENST00000558321 CENPSQ8N2Z9 138 aa9.11□□□□□ -0.95
CDC42BPB-202ENST00000558321 FAM24BQ8N5W8 94 aa9.11□□□□□ -0.95
CDC42BPB-202ENST00000558321 RARRES2Q99969 163 aa9.11□□□□□ -0.95
CDC42BPB-202ENST00000558321 RBM38Q9H0Z9 239 aaKnown RBP9.11□□□□□ -0.95
CDC42BPB-202ENST00000558321 ZFP92A6NM28 416 aa9.1□□□□□ -0.95
CDC42BPB-202ENST00000558321 K7EQG2 157 aa9.1□□□□□ -0.95
CDC42BPB-202ENST00000558321 MED6O75586 246 aa9.1□□□□□ -0.95
CDC42BPB-202ENST00000558321 SFT2D2O95562 160 aa9.1□□□□□ -0.95
CDC42BPB-202ENST00000558321 TOMM40O96008 361 aa9.1□□□□□ -0.95
CDC42BPB-202ENST00000558321 CA1P00915 261 aaPredicted RBP9.1□□□□□ -0.95
CDC42BPB-202ENST00000558321 ZNF688P0C7X2 276 aa9.1□□□□□ -0.95
CDC42BPB-202ENST00000558321 IAPPP10997 89 aa9.1□□□□□ -0.95
CDC42BPB-202ENST00000558321 GPX4P36969 197 aaPredicted RBP9.1□□□□□ -0.95
CDC42BPB-202ENST00000558321 AP2S1P53680 142 aaPredicted RBP9.1□□□□□ -0.95
CDC42BPB-202ENST00000558321 RAB11AP62491 216 aa9.1□□□□□ -0.95
CDC42BPB-202ENST00000558321 DHRS2Q13268 280 aa9.1□□□□□ -0.95
CDC42BPB-202ENST00000558321 TRIQKQ629K1 86 aa9.1□□□□□ -0.95
CDC42BPB-202ENST00000558321 GATAD1Q8WUU5 269 aa9.1□□□□□ -0.95
CDC42BPB-202ENST00000558321 SLC35E1Q96K37 410 aa9.1□□□□□ -0.95
CDC42BPB-202ENST00000558321 PFDN2Q9UHV9 154 aa9.1□□□□□ -0.95
CDC42BPB-202ENST00000558321 DNAH7Q8WXX0 4024 aa9.09□□□□□ -0.95
CDC42BPB-202ENST00000558321 LINC00854A0A1B0GVQ3 168 aa9.09□□□□□ -0.95
CDC42BPB-202ENST00000558321 HOXB5P09067 269 aa9.09□□□□□ -0.95
CDC42BPB-202ENST00000558321 PSG1P11464 419 aa9.09□□□□□ -0.95
CDC42BPB-202ENST00000558321 SLC25A6P12236 298 aa9.09□□□□□ -0.95
CDC42BPB-202ENST00000558321 RPP30P78346 268 aaKnown RBP9.09□□□□□ -0.95
CDC42BPB-202ENST00000558321 EWSR1Q01844 656 aaKnown RBP eCLIP9.09□□□□□ -0.95
CDC42BPB-202ENST00000558321 PPP1R1AQ13522 171 aa9.09□□□□□ -0.95
CDC42BPB-202ENST00000558321 USF2Q15853 346 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPB-202ENST00000558321 C16orf54Q6UWD8 224 aa9.09□□□□□ -0.95
CDC42BPB-202ENST00000558321 LRTM2Q8N967 370 aa9.09□□□□□ -0.95
CDC42BPB-202ENST00000558321 OR51G1Q8NGK1 321 aa9.09□□□□□ -0.95
CDC42BPB-202ENST00000558321 OR11H2Q8NH07 326 aa9.09□□□□□ -0.95
CDC42BPB-202ENST00000558321 PBDC1Q9BVG4 233 aa9.09□□□□□ -0.95
CDC42BPB-202ENST00000558321 TMED3Q9Y3Q3 217 aa9.09□□□□□ -0.95
CDC42BPB-202ENST00000558321 U3KQE9 123 aa9.09□□□□□ -0.95
CDC42BPB-202ENST00000558321 RYR3Q15413 4870 aa9.09□□□□□ -0.95
CDC42BPB-202ENST00000558321 KNCNA6PVL3 124 aa9.08□□□□□ -0.96
CDC42BPB-202ENST00000558321 WRBO00258 174 aa9.08□□□□□ -0.96
CDC42BPB-202ENST00000558321 PITX3O75364 302 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms