RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 PSMG4Q5JS54 123 aa11.34□□□□□ -0.59
TPM1-211ENST00000558314 PVRIGQ6DKI7 326 aa11.34□□□□□ -0.59
TPM1-211ENST00000558314 CLVS1Q8IUQ0 354 aaPredicted RBP11.34□□□□□ -0.59
TPM1-211ENST00000558314 SLC24A4Q8NFF2 622 aa11.34□□□□□ -0.59
TPM1-211ENST00000558314 OR1S2Q8NGQ3 325 aa11.34□□□□□ -0.59
TPM1-211ENST00000558314 C11orf68Q9H3H3 251 aaKnown RBP11.34□□□□□ -0.59
TPM1-211ENST00000558314 IGLL5B9A064 214 aa11.33□□□□□ -0.6
TPM1-211ENST00000558314 IFNA10P01566 189 aa11.33□□□□□ -0.6
TPM1-211ENST00000558314 IL4P05112 153 aa11.33□□□□□ -0.6
TPM1-211ENST00000558314 HNRNPCP07910 306 aaKnown RBP eCLIP11.33□□□□□ -0.6
TPM1-211ENST00000558314 MRPS10P82664 201 aaKnown RBP11.33□□□□□ -0.6
TPM1-211ENST00000558314 PRSS54Q6PEW0 395 aa11.33□□□□□ -0.6
TPM1-211ENST00000558314 CENPSQ8N2Z9 138 aa11.33□□□□□ -0.6
TPM1-211ENST00000558314 OR51S1Q8NGJ8 323 aa11.33□□□□□ -0.6
TPM1-211ENST00000558314 OR52E5Q8NH55 327 aa11.33□□□□□ -0.6
TPM1-211ENST00000558314 C2CD4CQ8TF44 421 aa11.33□□□□□ -0.6
TPM1-211ENST00000558314 SMIM4Q8WVI0 70 aa11.33□□□□□ -0.6
TPM1-211ENST00000558314 MCUBQ9NWR8 336 aa11.33□□□□□ -0.6
TPM1-211ENST00000558314 IGHV4-28A0A0C4DH34 117 aa11.32□□□□□ -0.6
TPM1-211ENST00000558314 HELTA6NFD8 242 aa11.32□□□□□ -0.6
TPM1-211ENST00000558314 CRYM-AS1A6NIL9 109 aa11.32□□□□□ -0.6
TPM1-211ENST00000558314 IGLC1P0CG04 106 aa11.32□□□□□ -0.6
TPM1-211ENST00000558314 AKR1C4P17516 323 aa11.32□□□□□ -0.6
TPM1-211ENST00000558314 C4BPBP20851 252 aa11.32□□□□□ -0.6
TPM1-211ENST00000558314 NPY1RP25929 384 aa11.32□□□□□ -0.6
TPM1-211ENST00000558314 SSBP1Q04837 148 aaKnown RBP11.32□□□□□ -0.6
TPM1-211ENST00000558314 BSXQ3C1V8 233 aa11.32□□□□□ -0.6
TPM1-211ENST00000558314 C2orf83Q53S99 150 aa11.32□□□□□ -0.6
TPM1-211ENST00000558314 LGALS9CQ6DKI2 356 aa11.32□□□□□ -0.6
TPM1-211ENST00000558314 TRPT1Q86TN4 253 aaKnown RBP11.32□□□□□ -0.6
TPM1-211ENST00000558314 NPIPB3Q92617 1050 aa11.32□□□□□ -0.6
TPM1-211ENST00000558314 PRRT1Q99946 306 aa11.32□□□□□ -0.6
TPM1-211ENST00000558314 GPR132Q9UNW8 380 aa11.32□□□□□ -0.6
TPM1-211ENST00000558314 SULT1A3P0DMM9 295 aa11.31□□□□□ -0.6
TPM1-211ENST00000558314 SULT1A4P0DMN0 295 aa11.31□□□□□ -0.6
TPM1-211ENST00000558314 SLC25A4P12235 298 aa11.31□□□□□ -0.6
TPM1-211ENST00000558314 SURF2Q15527 256 aaPredicted RBP11.31□□□□□ -0.6
TPM1-211ENST00000558314 ETFRF1Q6IPR1 90 aa11.31□□□□□ -0.6
TPM1-211ENST00000558314 RNASEH2CQ8TDP1 164 aaKnown RBP11.31□□□□□ -0.6
TPM1-211ENST00000558314 PBDC1Q9BVG4 233 aa11.31□□□□□ -0.6
TPM1-211ENST00000558314 KCNIP3Q9Y2W7 256 aa11.31□□□□□ -0.6
TPM1-211ENST00000558314 AGRNO00468 2067 aa11.31□□□□□ -0.6
TPM1-211ENST00000558314 GIG44P09565 113 aaPredicted RBP11.3□□□□□ -0.6
TPM1-211ENST00000558314 RBMY1A1P0DJD3 496 aaKnown RBP11.3□□□□□ -0.6
TPM1-211ENST00000558314 RBMY1CP0DJD4 496 aa11.3□□□□□ -0.6
TPM1-211ENST00000558314 RD3LP0DJH9 198 aa11.3□□□□□ -0.6
TPM1-211ENST00000558314 SPP1P10451 314 aa11.3□□□□□ -0.6
TPM1-211ENST00000558314 RBMY1FQ15415 496 aaKnown RBP11.3□□□□□ -0.6
TPM1-211ENST00000558314 USF2Q15853 346 aaPredicted RBP11.3□□□□□ -0.6
TPM1-211ENST00000558314 MORN3Q6PF18 240 aaPredicted RBP11.3□□□□□ -0.6
TPM1-211ENST00000558314 C16orf54Q6UWD8 224 aa11.3□□□□□ -0.6
TPM1-211ENST00000558314 Q8NAQ8 132 aa11.3□□□□□ -0.6
TPM1-211ENST00000558314 DCANP1Q8TF63 244 aa11.3□□□□□ -0.6
TPM1-211ENST00000558314 TMEM170AQ8WVE7 144 aa11.3□□□□□ -0.6
TPM1-211ENST00000558314 RAB40CQ96S21 281 aa11.3□□□□□ -0.6
TPM1-211ENST00000558314 SCP2D1Q9UJQ7 156 aa11.3□□□□□ -0.6
TPM1-211ENST00000558314 PAIP2BQ9ULR5 123 aaKnown RBP11.3□□□□□ -0.6
TPM1-211ENST00000558314 HLA-DMBP28068 263 aa11.29□□□□□ -0.6
TPM1-211ENST00000558314 ALDH3B2P48448 385 aa11.29□□□□□ -0.6
TPM1-211ENST00000558314 YPEL3P61236 119 aaPredicted RBP11.29□□□□□ -0.6
TPM1-211ENST00000558314 ZNF767PQ75MW2 155 aa11.29□□□□□ -0.6
TPM1-211ENST00000558314 NOXA1Q86UR1 476 aa11.29□□□□□ -0.6
TPM1-211ENST00000558314 OR51G1Q8NGK1 321 aa11.29□□□□□ -0.6
TPM1-211ENST00000558314 GLMPQ8WWB7 406 aa11.29□□□□□ -0.6
TPM1-211ENST00000558314 TBC1D24Q9ULP9 559 aa11.29□□□□□ -0.6
TPM1-211ENST00000558314 NOL3O60936 208 aaKnown RBP11.28□□□□□ -0.6
TPM1-211ENST00000558314 IGKV3-20P01619 116 aa11.28□□□□□ -0.6
TPM1-211ENST00000558314 MIFP14174 115 aa11.28□□□□□ -0.6
TPM1-211ENST00000558314 AP2S1P53680 142 aaPredicted RBP11.28□□□□□ -0.6
TPM1-211ENST00000558314 SNRPD3P62318 126 aaKnown RBP11.28□□□□□ -0.6
TPM1-211ENST00000558314 PRR20EP86478 221 aa11.28□□□□□ -0.6
TPM1-211ENST00000558314 PRR20CP86479 221 aa11.28□□□□□ -0.6
TPM1-211ENST00000558314 PRR20DP86480 221 aa11.28□□□□□ -0.6
TPM1-211ENST00000558314 PRR20BP86481 221 aa11.28□□□□□ -0.6
TPM1-211ENST00000558314 PRR20AP86496 221 aa11.28□□□□□ -0.6
TPM1-211ENST00000558314 AARDQ4LEZ3 155 aa11.28□□□□□ -0.6
TPM1-211ENST00000558314 TMEM41BQ5BJD5 291 aa11.28□□□□□ -0.6
TPM1-211ENST00000558314 SIGLEC15Q6ZMC9 328 aa11.28□□□□□ -0.6
TPM1-211ENST00000558314 LYZL2Q7Z4W2 148 aa11.28□□□□□ -0.6
TPM1-211ENST00000558314 LGI3Q8N145 548 aa11.28□□□□□ -0.6
TPM1-211ENST00000558314 OR1S1Q8NH92 325 aa11.28□□□□□ -0.6
TPM1-211ENST00000558314 DTD1Q8TEA8 209 aa11.28□□□□□ -0.6
TPM1-211ENST00000558314 RBKSQ9H477 322 aa11.28□□□□□ -0.6
TPM1-211ENST00000558314 XCL2Q9UBD3 114 aa11.28□□□□□ -0.6
TPM1-211ENST00000558314 TMEM56-RWDD3S4R434 201 aa11.28□□□□□ -0.6
TPM1-211ENST00000558314 ANKRD20A5PA0PJZ0 165 aa11.27□□□□□ -0.61
TPM1-211ENST00000558314 ZFP92A6NM28 416 aa11.27□□□□□ -0.61
TPM1-211ENST00000558314 FAM90A26D6RGX4 464 aa11.27□□□□□ -0.61
TPM1-211ENST00000558314 CTDSPLO15194 276 aa11.27□□□□□ -0.61
TPM1-211ENST00000558314 TOMM40O96008 361 aa11.27□□□□□ -0.61
TPM1-211ENST00000558314 SMCO1Q147U7 214 aa11.27□□□□□ -0.61
TPM1-211ENST00000558314 GSG1LQ6UXU4 331 aa11.27□□□□□ -0.61
TPM1-211ENST00000558314 Q6ZTC4 211 aa11.27□□□□□ -0.61
TPM1-211ENST00000558314 TMED4Q7Z7H5 227 aa11.27□□□□□ -0.61
TPM1-211ENST00000558314 SCGB3A2Q96PL1 93 aa11.27□□□□□ -0.61
TPM1-211ENST00000558314 CCDC59Q9P031 241 aaKnown RBP11.27□□□□□ -0.61
TPM1-211ENST00000558314 U3KQE9 123 aa11.27□□□□□ -0.61
TPM1-211ENST00000558314 X6R8D5 127 aa11.27□□□□□ -0.61
TPM1-211ENST00000558314 ELOA3CA0A087WX78 387 aaPredicted RBP11.26□□□□□ -0.61
TPM1-211ENST00000558314 C11orf94C9JXX5 98 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms