RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 PRR20AP86496 221 aa8.9□□□□□ -0.99
USP3-206ENST00000558157 HSD52Q0P140 79 aa8.9□□□□□ -0.99
USP3-206ENST00000558157 KLRB1Q12918 225 aa8.9□□□□□ -0.99
USP3-206ENST00000558157 PSG5Q15238 335 aa8.9□□□□□ -0.99
USP3-206ENST00000558157 GDF5OSQ5U4N7 250 aa8.9□□□□□ -0.99
USP3-206ENST00000558157 FAM214BQ7L5A3 538 aa8.9□□□□□ -0.99
USP3-206ENST00000558157 FA2HQ7L5A8 372 aa8.9□□□□□ -0.99
USP3-206ENST00000558157 MTURNQ8N3F0 131 aa8.9□□□□□ -0.99
USP3-206ENST00000558157 CNEP1R1Q8N9A8 125 aa8.9□□□□□ -0.99
USP3-206ENST00000558157 GALMQ96C23 342 aa8.9□□□□□ -0.99
USP3-206ENST00000558157 TP73-AS1Q9UF72 201 aa8.9□□□□□ -0.99
USP3-206ENST00000558157 DUSP13Q9UII6 198 aa8.9□□□□□ -0.99
USP3-206ENST00000558157 TRGV8A0A0C4DH27 118 aa8.89□□□□□ -0.99
USP3-206ENST00000558157 MBD3L4A6NDZ8 208 aaPredicted RBP8.89□□□□□ -0.99
USP3-206ENST00000558157 MBD3L3A6NE82 208 aaPredicted RBP8.89□□□□□ -0.99
USP3-206ENST00000558157 MBD3L5A6NJ08 208 aaPredicted RBP8.89□□□□□ -0.99
USP3-206ENST00000558157 A6NJY4 79 aa8.89□□□□□ -0.99
USP3-206ENST00000558157 SIVA1O15304 175 aa8.89□□□□□ -0.99
USP3-206ENST00000558157 FOXH1O75593 365 aa8.89□□□□□ -0.99
USP3-206ENST00000558157 FOXF2Q12947 444 aa8.89□□□□□ -0.99
USP3-206ENST00000558157 TCTEX1D4Q5JR98 221 aa8.89□□□□□ -0.99
USP3-206ENST00000558157 SPATA31B1PQ5VZV4 182 aa8.89□□□□□ -0.99
USP3-206ENST00000558157 GFRALQ6UXV0 394 aa8.89□□□□□ -0.99
USP3-206ENST00000558157 OR10W1Q8NGF6 305 aa8.89□□□□□ -0.99
USP3-206ENST00000558157 MBD3L2Q8NHZ7 208 aaPredicted RBP8.89□□□□□ -0.99
USP3-206ENST00000558157 FGFBP3Q8TAT2 258 aa8.89□□□□□ -0.99
USP3-206ENST00000558157 HEYLQ9NQ87 328 aaPredicted RBP8.89□□□□□ -0.99
USP3-206ENST00000558157 J3QT63 122 aa8.89□□□□□ -0.99
USP3-206ENST00000558157 F2RL2O00254 374 aa8.89□□□□□ -0.99
USP3-206ENST00000558157 APOA2P02652 100 aa8.89□□□□□ -0.99
USP3-206ENST00000558157 KIR2DL2P43627 348 aaPredicted RBP8.89□□□□□ -0.99
USP3-206ENST00000558157 WDR82Q6UXN9 313 aa8.89□□□□□ -0.99
USP3-206ENST00000558157 ZNF841Q6ZN19 808 aa8.89□□□□□ -0.99
USP3-206ENST00000558157 OR9G4Q8NGQ1 327 aa8.89□□□□□ -0.99
USP3-206ENST00000558157 SSMEM1Q8WWF3 244 aa8.89□□□□□ -0.99
USP3-206ENST00000558157 PLEKHA3Q9HB20 300 aa8.89□□□□□ -0.99
USP3-206ENST00000558157 A0A096LPE4 126 aa8.88□□□□□ -0.99
USP3-206ENST00000558157 A0A1W2PPM0 123 aa8.88□□□□□ -0.99
USP3-206ENST00000558157 A0A1W2PPZ6 126 aa8.88□□□□□ -0.99
USP3-206ENST00000558157 ANKRD30BLA7E2S9 258 aa8.88□□□□□ -0.99
USP3-206ENST00000558157 LY6DQ14210 128 aa8.88□□□□□ -0.99
USP3-206ENST00000558157 CD300EQ496F6 205 aaPredicted RBP8.88□□□□□ -0.99
USP3-206ENST00000558157 SPINK9Q5DT21 86 aa8.88□□□□□ -0.99
USP3-206ENST00000558157 FAM216AQ8WUB2 273 aa8.88□□□□□ -0.99
USP3-206ENST00000558157 C5orf30Q96GV9 206 aa8.88□□□□□ -0.99
USP3-206ENST00000558157 C1orf159Q96HA4 380 aa8.88□□□□□ -0.99
USP3-206ENST00000558157 ZNF48Q96MX3 618 aaPredicted RBP8.88□□□□□ -0.99
USP3-206ENST00000558157 JMJD8Q96S16 334 aa8.88□□□□□ -0.99
USP3-206ENST00000558157 IDI2-AS1Q9NZ38 188 aa8.88□□□□□ -0.99
USP3-206ENST00000558157 PKD1L2Q7Z442 2459 aa8.88□□□□□ -0.99
USP3-206ENST00000558157 GGTLC3B5MD39 225 aa8.88□□□□□ -0.99
USP3-206ENST00000558157 H3BUT2 72 aa8.88□□□□□ -0.99
USP3-206ENST00000558157 OR2H2O95918 312 aa8.88□□□□□ -0.99
USP3-206ENST00000558157 CA6P23280 308 aa8.88□□□□□ -0.99
USP3-206ENST00000558157 HBBP68871 147 aa8.88□□□□□ -0.99
USP3-206ENST00000558157 OR4A16Q8NH70 328 aa8.88□□□□□ -0.99
USP3-206ENST00000558157 SPCS1Q9Y6A9 102 aa8.88□□□□□ -0.99
USP3-206ENST00000558157 ZNF488Q96MN9 340 aa8.87□□□□□ -0.99
USP3-206ENST00000558157 NDFIP1Q9BT67 221 aa8.87□□□□□ -0.99
USP3-206ENST00000558157 TMEM30CPA0ZSE6 113 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 OOEPA6NGQ2 149 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 PRRG2O14669 202 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 FABP2P12104 132 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 DUTP33316 252 aaKnown RBP8.86□□□□□ -0.99
USP3-206ENST00000558157 KIR3DS1Q14943 382 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 ZNF146Q15072 292 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 FOXI2Q6ZQN5 318 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 MIR17HGQ75NE6 70 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 ZNF808Q8N4W9 903 aaPredicted RBP8.86□□□□□ -0.99
USP3-206ENST00000558157 OR4X2Q8NGF9 303 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 LRRC29Q8WV35 223 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 ZNF355PQ9NSJ1 428 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 ZNF257Q9Y2Q1 563 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 POLDIP2Q9Y2S7 368 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 ATRXP46100 2492 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 MAP1BP46821 2468 aaKnown RBP8.86□□□□□ -0.99
USP3-206ENST00000558157 ZNF503-AS2A6NEH8 195 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 HIGD1CA8MV81 97 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 CA1P00915 261 aaPredicted RBP8.86□□□□□ -0.99
USP3-206ENST00000558157 CT83Q5H943 113 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 CFAP161Q6P656 301 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 TMEM108Q6UXF1 575 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 SSX8Q7RTT4 187 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 TPRX1Q8N7U7 411 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 OR4A5Q8NH83 315 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 FAM168AQ92567 244 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 SPATA25Q9BR10 227 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 GCM1Q9NP62 436 aa8.86□□□□□ -0.99
USP3-206ENST00000558157 J3QW42 95 aa8.85□□□□□ -0.99
USP3-206ENST00000558157 FGF6P10767 208 aa8.85□□□□□ -0.99
USP3-206ENST00000558157 IGHV1-2P23083 117 aa8.85□□□□□ -0.99
USP3-206ENST00000558157 PRAMEF5Q5TYX0 476 aa8.85□□□□□ -0.99
USP3-206ENST00000558157 PRAMEF6Q5VXH4 476 aa8.85□□□□□ -0.99
USP3-206ENST00000558157 GTSF1LQ9H1H1 148 aa8.85□□□□□ -0.99
USP3-206ENST00000558157 PROCRQ9UNN8 238 aa8.85□□□□□ -0.99
USP3-206ENST00000558157 NBEAQ8NFP9 2946 aa8.85□□□□□ -0.99
USP3-206ENST00000558157 ZGRF1Q86YA3 2104 aa8.85□□□□□ -0.99
USP3-206ENST00000558157 GAGE12HA6NDE8 117 aa8.85□□□□□ -0.99
USP3-206ENST00000558157 LYZL6O75951 148 aa8.85□□□□□ -0.99
USP3-206ENST00000558157 NGFP01138 241 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms