RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 C15orf62A8K5M9 175 aa6.8□□□□□ -1.32
SPG11-207ENST00000558138 MPTX1A8MV57 137 aa6.8□□□□□ -1.32
SPG11-207ENST00000558138 TMEM50AO95807 157 aa6.8□□□□□ -1.32
SPG11-207ENST00000558138 ATP5IP56385 69 aaPredicted RBP6.8□□□□□ -1.32
SPG11-207ENST00000558138 S100A10P60903 97 aa6.8□□□□□ -1.32
SPG11-207ENST00000558138 POLR2GP62487 172 aaKnown RBP eCLIP6.8□□□□□ -1.32
SPG11-207ENST00000558138 BSXQ3C1V8 233 aa6.8□□□□□ -1.32
SPG11-207ENST00000558138 GSG1LQ6UXU4 331 aa6.8□□□□□ -1.32
SPG11-207ENST00000558138 TMEM116Q8NCL8 245 aa6.8□□□□□ -1.32
SPG11-207ENST00000558138 Q8WTZ3 238 aa6.8□□□□□ -1.32
SPG11-207ENST00000558138 NPIPB3Q92617 1050 aa6.8□□□□□ -1.32
SPG11-207ENST00000558138 METTL26Q96S19 204 aa6.8□□□□□ -1.32
SPG11-207ENST00000558138 NEURL2Q9BR09 285 aa6.8□□□□□ -1.32
SPG11-207ENST00000558138 TMEM231Q9H6L2 316 aa6.8□□□□□ -1.32
SPG11-207ENST00000558138 PSENENQ9NZ42 101 aa6.8□□□□□ -1.32
SPG11-207ENST00000558138 LSM5Q9Y4Y9 91 aaKnown RBP6.8□□□□□ -1.32
SPG11-207ENST00000558138 IGHV3-66A0A0C4DH42 116 aa6.79□□□□□ -1.32
SPG11-207ENST00000558138 IGHV7-4-1A0A0J9YVY3 117 aa6.79□□□□□ -1.32
SPG11-207ENST00000558138 K7EMT4 169 aa6.79□□□□□ -1.32
SPG11-207ENST00000558138 PITX3O75364 302 aa6.79□□□□□ -1.32
SPG11-207ENST00000558138 FABP1P07148 127 aa6.79□□□□□ -1.32
SPG11-207ENST00000558138 TFPI2P48307 235 aa6.79□□□□□ -1.32
SPG11-207ENST00000558138 BCAP31P51572 246 aa6.79□□□□□ -1.32
SPG11-207ENST00000558138 AKR1C1Q04828 323 aa6.79□□□□□ -1.32
SPG11-207ENST00000558138 OR8G2PQ6IF36 304 aa6.79□□□□□ -1.32
SPG11-207ENST00000558138 PRSS54Q6PEW0 395 aa6.79□□□□□ -1.32
SPG11-207ENST00000558138 TOMM20LQ6UXN7 152 aa6.79□□□□□ -1.32
SPG11-207ENST00000558138 ADAMTSL5Q6ZMM2 481 aa6.79□□□□□ -1.32
SPG11-207ENST00000558138 TMEM61Q8N0U2 210 aa6.79□□□□□ -1.32
SPG11-207ENST00000558138 ZBTB8BQ8NAP8 495 aaPredicted RBP6.79□□□□□ -1.32
SPG11-207ENST00000558138 B9D2Q9BPU9 175 aa6.79□□□□□ -1.32
SPG11-207ENST00000558138 PBDC1Q9BVG4 233 aa6.79□□□□□ -1.32
SPG11-207ENST00000558138 RHPN1-AS1Q9BWJ2 59 aa6.79□□□□□ -1.32
SPG11-207ENST00000558138 MRPL36Q9P0J6 103 aaKnown RBP6.79□□□□□ -1.32
SPG11-207ENST00000558138 SORL1Q92673 2214 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 TRAV25A0A0B4J276 109 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 A0A1W2PS18 150 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 INMT-MINDY4F8WBC2 141 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 DNASE2O00115 360 aaPredicted RBP6.78□□□□□ -1.32
SPG11-207ENST00000558138 GOSR2O14653 212 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 SSNA1O43805 119 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 PRAF2O60831 178 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 IL4P05112 153 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 FRMD6-AS1P0C7T7 363 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 RD3LP0DJH9 198 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 IGHV4-30-4P0DP06 118 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 PVALBP20472 110 aaPredicted RBP6.78□□□□□ -1.32
SPG11-207ENST00000558138 NPPCP23582 126 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 PAFAH1B2P68402 229 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 PVRIGQ6DKI7 326 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 NRARPQ7Z6K4 114 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 OR4D5Q8NGN0 318 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 PPP1R14BQ96C90 147 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 GRAMD2BQ96HH9 432 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 OR10C1Q96KK4 312 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 SMPXQ9UHP9 88 aa6.78□□□□□ -1.32
SPG11-207ENST00000558138 RCL1Q9Y2P8 373 aaKnown RBP6.78□□□□□ -1.32
SPG11-207ENST00000558138 LSM4Q9Y4Z0 139 aaKnown RBP6.78□□□□□ -1.32
SPG11-207ENST00000558138 OR4C46A6NHA9 309 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 OR11H12B2RN74 326 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 CHEK1O14757 476 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 IL5P05113 134 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 HNRNPCP07910 306 aaKnown RBP eCLIP6.77□□□□□ -1.33
SPG11-207ENST00000558138 CD7P09564 240 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 IGLC1P0CG04 106 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 C8orf88P0DMB2 117 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 GPX4P36969 197 aaPredicted RBP6.77□□□□□ -1.33
SPG11-207ENST00000558138 EIF2B2P49770 351 aaKnown RBP6.77□□□□□ -1.33
SPG11-207ENST00000558138 CAV2P51636 162 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 LYZP61626 148 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 IFITM3Q01628 133 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 ID3Q02535 119 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 TCF24Q7RTU0 167 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 WFDC3Q8IUB2 231 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 GBGT1Q8N5D6 347 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 TMEM170AQ8WVE7 144 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 ST8SIA2Q92186 375 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 C2orf50Q96LR7 162 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 RAB40CQ96S21 281 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 RNF2Q99496 336 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 SPAG8Q99932 426 aaPredicted RBP6.77□□□□□ -1.33
SPG11-207ENST00000558138 ZMAT4Q9H898 229 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 SRD5A3Q9H8P0 318 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 MGAT4CQ9UBM8 478 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 UBQLN2Q9UHD9 624 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 PFDN2Q9UHV9 154 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 RABAC1Q9UI14 185 aa6.77□□□□□ -1.33
SPG11-207ENST00000558138 ZNF785A8K8V0 405 aa6.76□□□□□ -1.33
SPG11-207ENST00000558138 TOMM40O96008 361 aa6.76□□□□□ -1.33
SPG11-207ENST00000558138 MBPP02686 304 aaPredicted RBP6.76□□□□□ -1.33
SPG11-207ENST00000558138 METTL15P1P0C7V9 234 aa6.76□□□□□ -1.33
SPG11-207ENST00000558138 YPEL3P61236 119 aaPredicted RBP6.76□□□□□ -1.33
SPG11-207ENST00000558138 RRAS2P62070 204 aaPredicted RBP6.76□□□□□ -1.33
SPG11-207ENST00000558138 OR2F1Q13607 317 aa6.76□□□□□ -1.33
SPG11-207ENST00000558138 GAMTQ14353 236 aa6.76□□□□□ -1.33
SPG11-207ENST00000558138 ACOT7LQ6ZUV0 252 aa6.76□□□□□ -1.33
SPG11-207ENST00000558138 DEFB125Q8N687 156 aa6.76□□□□□ -1.33
SPG11-207ENST00000558138 STXBP6Q8NFX7 210 aa6.76□□□□□ -1.33
SPG11-207ENST00000558138 OR10P1Q8NGE3 313 aa6.76□□□□□ -1.33
SPG11-207ENST00000558138 OR51G1Q8NGK1 321 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms