RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 SMIM12Q96EX1 92 aa9.56□□□□□ -0.88
VIPAS39-211ENST00000557658 C7orf69Q9H7B7 122 aa9.56□□□□□ -0.88
VIPAS39-211ENST00000557658 TRAV17A0A0B4J275 112 aa9.56□□□□□ -0.88
VIPAS39-211ENST00000557658 CORTO00230 105 aa9.56□□□□□ -0.88
VIPAS39-211ENST00000557658 GNG5P63218 68 aa9.56□□□□□ -0.88
VIPAS39-211ENST00000557658 HBBP68871 147 aa9.56□□□□□ -0.88
VIPAS39-211ENST00000557658 FDCSPQ8NFU4 85 aa9.56□□□□□ -0.88
VIPAS39-211ENST00000557658 STXBP6Q8NFX7 210 aa9.56□□□□□ -0.88
VIPAS39-211ENST00000557658 OR4F17Q8NGA8 305 aa9.56□□□□□ -0.88
VIPAS39-211ENST00000557658 EPDR1Q9UM22 224 aa9.56□□□□□ -0.88
VIPAS39-211ENST00000557658 SLC25A5P05141 298 aaKnown RBP9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 MYCNOSP40205 109 aa9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 TMEM177Q53S58 311 aa9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 TIMM23BQ5SRD1 257 aa9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 LINC00305Q7Z4B0 112 aa9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 THAP8Q8NA92 274 aa9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 TMEM167AQ8TBQ9 72 aa9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 FLYWCH2Q96CP2 140 aaKnown RBP9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 FNDC4Q9H6D8 234 aaPredicted RBP9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 LINC00312Q9Y6C7 94 aa9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 IGKV1D-37A0A075B6S9 117 aa9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 TNFSF4P23510 183 aa9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 ZNF841Q6ZN19 808 aa9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 Q6ZVH6 145 aa9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 OR4A5Q8NH83 315 aa9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 VSTM2AQ8TAG5 236 aa9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 GPR82Q96P67 336 aa9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 GAL3ST2Q9H3Q3 398 aa9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 RPP21Q9H633 154 aaKnown RBP9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 CLEC5AQ9NY25 188 aa9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 SOX21Q9Y651 276 aaPredicted RBP9.55□□□□□ -0.88
VIPAS39-211ENST00000557658 ICE1Q9Y2F5 2266 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 A8MWL6 223 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 VWC2LB2RUY7 222 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 E7EUB6 86 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 FSTL3O95633 263 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 IGHV1-46P01743 117 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 WT1-ASQ06250 92 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 SSX8Q7RTT4 187 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 KIR3DL3Q8N743 410 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 OR5AN1Q8NGI8 311 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 PERPQ96FX8 193 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 URB1-AS1Q96HZ7 61 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 ST20Q9HBF5 79 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 C1RLQ9NZP8 487 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 SSUH2Q9Y2M2 353 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 KLF12Q9Y4X4 402 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 GPR179Q6PRD1 2367 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 OR4C46A6NHA9 309 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 CDX4O14627 284 aaPredicted RBP9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 NKX2-8O15522 239 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 TCF24Q7RTU0 167 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 SPATA12Q7Z6I5 190 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 CHCHD1Q96BP2 118 aaKnown RBP9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 DYSFO75923 2080 aa9.54□□□□□ -0.88
VIPAS39-211ENST00000557658 PGPA6NDG6 321 aa9.53□□□□□ -0.88
VIPAS39-211ENST00000557658 K7EP13 123 aa9.53□□□□□ -0.88
VIPAS39-211ENST00000557658 PLAUP00749 431 aa9.53□□□□□ -0.88
VIPAS39-211ENST00000557658 IGHV3-48P01763 117 aa9.53□□□□□ -0.88
VIPAS39-211ENST00000557658 C3orf36Q3SXR2 165 aa9.53□□□□□ -0.88
VIPAS39-211ENST00000557658 FBLN7Q53RD9 439 aa9.53□□□□□ -0.88
VIPAS39-211ENST00000557658 CT83Q5H943 113 aa9.53□□□□□ -0.88
VIPAS39-211ENST00000557658 OR4C13Q8NGP0 309 aa9.53□□□□□ -0.88
VIPAS39-211ENST00000557658 RNASE8Q8TDE3 154 aaKnown RBP9.53□□□□□ -0.88
VIPAS39-211ENST00000557658 BLNKQ8WV28 456 aa9.53□□□□□ -0.88
VIPAS39-211ENST00000557658 MBD3L4A6NDZ8 208 aaPredicted RBP9.53□□□□□ -0.88
VIPAS39-211ENST00000557658 MBD3L3A6NE82 208 aaPredicted RBP9.53□□□□□ -0.88
VIPAS39-211ENST00000557658 MBD3L5A6NJ08 208 aaPredicted RBP9.53□□□□□ -0.88
VIPAS39-211ENST00000557658 CRXO43186 299 aaPredicted RBP9.53□□□□□ -0.88
VIPAS39-211ENST00000557658 FAM120AOSQ5T036 256 aa9.53□□□□□ -0.88
VIPAS39-211ENST00000557658 IGFL2Q6UWQ7 119 aa9.53□□□□□ -0.88
VIPAS39-211ENST00000557658 MBD3L2Q8NHZ7 208 aaPredicted RBP9.53□□□□□ -0.88
VIPAS39-211ENST00000557658 SGK494Q96LW2 274 aa9.53□□□□□ -0.88
VIPAS39-211ENST00000557658 RPH3ALQ9UNE2 315 aa9.53□□□□□ -0.88
VIPAS39-211ENST00000557658 SVILO95425 2214 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 CGB1A6NKQ9 187 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 MOSP00540 346 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 P01737 135 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 ORM2P19652 201 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 REG1BP48304 166 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 TEX36Q5VZQ5 186 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 SEM1Q6ZVN7 128 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 ZCCHC24Q8N2G6 241 aaKnown RBP9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 C22orf15Q8WYQ4 148 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 FMC1Q96HJ9 113 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 MLST8Q9BVC4 326 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 PRSS22Q9GZN4 317 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 ZNF492Q9P255 531 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 NAV3Q8IVL0 2385 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 IGHV2-70DA0A0C4DH43 119 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 SH2D7A6NKC9 451 aaPredicted RBP9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 SYS1-DBNDD2H3BUS1 97 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 LEPROTL1O95214 131 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 FOXA3P55318 350 aaPredicted RBP9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 RBX1P62877 108 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 MEF2CQ06413 473 aaPredicted RBP9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 C10orf55Q5SWW7 151 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 OR4C5Q8NGB2 326 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 OR1B1Q8NGR6 318 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 DAZAP1Q96EP5 407 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms